Pay0016633 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016633
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	CLAVATA3/ESR (CLE)-related protein 25
Location	chr09: 2734135 .. 2735269 (+)
RNA-Seq Expression	Pay0016633
Synteny	Pay0016633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGTAAGTGTAGTTTTTTGAAGTCTCTGTTTGGAGCTTTTCTCTTTCTTGGTATCATTTGGTTCTCTTTTATTGGAGTGATTGATAATGCTAGCCTAGCATCTAGAAGAGAGACAGACATGCAGTGGAAGCTAATTGGAAAAGAGAAACATTTCTTTCATTGGCATTCTGATTTTTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGTACCCAATTCTTGCTTCTTCTAATTTACTACATTTACAGATATGTTTAGCTAATTTTTCCATTTCTCCTGCTCATTGCAAGTATTGTCTTCAACCTTTGTCTAAGTGTCTCTCTTTCTTTTAATCCTTAATCTACTAAAGTTGGTTGTTGGGTTTTACGATTTCTCTACAATTCTACAAATTTGTATCATCTTGAGGACAAAACTTTGACCATAAATCTTCTCCTCAGAAAAGGAAAATTTACACGAAGAACTTGACTGCCCAAACTTCAATTAGACGAAAGATAAATGGACTGAGAATTCATTAGTAAAATTATGAACTCTTACACCATTGCTTTTATCGTCTCTTCCAATAATCGTTATTAGTCGTTATTAGTTTCCTCTCTATGTACTACGAATTGTTAAGCATGGAACAGAATTCAGCTTCAGATTCAACCATTATTTAAACATTTCAAAACAGAGTATTGCTTTGCCTCTACACAGTTTGCTTACTTTTCTTTTATTCGGTTTTGGCAACTTGAGTTAGTAAAAAGAGAAGCAGGAAACTGTTTCAATTGAGATTTGTTGAAGTTGATGAGTCTCACTTTTTTTCTTTTCTTTTTTTTTTTCCAAAATAAAAGCGAACAAAAAAAGAACAGAACTTCTTTTTTATCACCCTTTCTCTTATTTTTATGAGCTATTAAAGGCATTGGGGCAAGATCTTGACCACTTTAGTCCATAAGCTTGAGATCATAGATATAGGTAATTACATAACAACATTTTCGTTTCTCTTTGCTACAAAACCATGATTAACACACACTCTCTCTCTGTCTCTGTGCCTTTAACATTTCCTATGAATTTGATTGCTCAAAATGTGATTTCAGGAGAGTTGAGAATTCTAGACAACCACCAATTCGAGTGTAA

mRNA sequence

ATGGAGAGTAAGTGTAGTTTTTTGAAGTCTCTGTTTGGAGCTTTTCTCTTTCTTGGTATCATTTGGTTCTCTTTTATTGGAGTGATTGATAATGCTAGCCTAGCATCTAGAAGAGAGACAGACATGCAGTGGAAGCTAATTGGAAAAGAGAAACATTTCTTTCATTGGCATTCTGATTTTTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTTGAGAATTCTAGACAACCACCAATTCGAGTGTAA

Coding sequence (CDS)

ATGGAGAGTAAGTGTAGTTTTTTGAAGTCTCTGTTTGGAGCTTTTCTCTTTCTTGGTATCATTTGGTTCTCTTTTATTGGAGTGATTGATAATGCTAGCCTAGCATCTAGAAGAGAGACAGACATGCAGTGGAAGCTAATTGGAAAAGAGAAACATTTCTTTCATTGGCATTCTGATTTTTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTTGAGAATTCTAGACAACCACCAATTCGAGTGTAA

Protein sequence

MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDFYSVSKRRVPNGPDPIHNRRVENSRQPPIRV

Homology

[Close]

BLAST of Pay0016633 vs. ExPASy Swiss-Prot
Match: Q8LFL4 (CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana OX=3702 GN=CLE25 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-09
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 8  LKSLFGAFLFLGIIWFSFIGVIDN-ASLASRRETDMQWKLIGKEKHFFHWHSDFYSVSKR 67
          +++L G    LG+I F  +G++ N A      E     +  GK+ + FH       VSKR
Sbjct: 6  IRALVGVIASLGLIVFLLVGILANSAPSVPSSENVKTLRFSGKDVNLFH-------VSKR 65

Query: 68 RVPNGPDPIHNRRVENSRQPP 88
          +VPNGPDPIHNR+ E SR+PP
Sbjct: 66 KVPNGPDPIHNRKAETSRRPP 79

[Close]

BLAST of Pay0016633 vs. ExPASy TrEMBL
Match: A0A0A0KS32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633230 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.1e-45
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDF 60
          MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIG+EKHFFHWHSDF
Sbjct: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGREKHFFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIRV 91
          YSVSKRRVPNGPDPIHNRRVENSRQPPIRV
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIRV 90

[Close]

BLAST of Pay0016633 vs. ExPASy TrEMBL
Match: A0A6J1HAQ4 (uncharacterized protein LOC111461653 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461653 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.4e-25
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 27  GVIDNASLASRRETDMQWKLIGKEKHFFHWHSDFYSVSKRRVPNGPDPIHNRRVENSRQP 86
           G IDNAS ASRR TDMQWK+IG EKH FHWHSDFYSVSKRRVPNGPDPIHNRRVENS+QP
Sbjct: 50  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQP 109

Query: 87  PIR 90
           P+R
Sbjct: 110 PVR 112

[Close]

BLAST of Pay0016633 vs. ExPASy TrEMBL
Match: A0A6J1HAS8 (uncharacterized protein LOC111461653 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461653 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.4e-25
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 27  GVIDNASLASRRETDMQWKLIGKEKHFFHWHSDFYSVSKRRVPNGPDPIHNRRVENSRQP 86
           G IDNAS ASRR TDMQWK+IG EKH FHWHSDFYSVSKRRVPNGPDPIHNRRVENS+QP
Sbjct: 50  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQP 109

Query: 87  PIR 90
           P+R
Sbjct: 110 PVR 112

[Close]

BLAST of Pay0016633 vs. ExPASy TrEMBL
Match: A0A5A7T759 (CLAVATA3/ESR (CLE)-related protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00030 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.4e-19
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 34 LASRRETDMQWKLIGKEKHFFHWHSDFYSVSKRRVPNGPDPIHNR 79
          LASRRETDMQWKLIGKEKHFFHWHSDFYSVSKRRVPNGPDPIHNR
Sbjct: 25 LASRRETDMQWKLIGKEKHFFHWHSDFYSVSKRRVPNGPDPIHNR 69

[Close]

BLAST of Pay0016633 vs. ExPASy TrEMBL
Match: A0A6J5WYJ6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23893 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17
Identity = 50/95 (52.63%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNAS------LASRRETDMQWKLIGKEKHFF 60
          MES    L++LFGA L LG+ WF   G++ N S        S  +    WKLIG+EKH  
Sbjct: 1  MESDRKVLRTLFGALLLLGVFWFFLAGILVNRSTEKSTVTVSSTKMFKHWKLIGREKHAV 60

Query: 61 HWHSDFYSVSKRRVPNGPDPIHNRRVENSRQPPIR 90
           W S F  VSKRRVPNGPDPIHNRR   +RQPP R
Sbjct: 61 VWDSSFIYVSKRRVPNGPDPIHNRRAVKTRQPPTR 95

[Close]

BLAST of Pay0016633 vs. NCBI nr
Match: KGN52425.1 (hypothetical protein Csa_008367 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDF 60
          MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIG+EKHFFHWHSDF
Sbjct: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGREKHFFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIRV 91
          YSVSKRRVPNGPDPIHNRRVENSRQPPIRV
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIRV 90

[Close]

BLAST of Pay0016633 vs. NCBI nr
Match: KAG6578608.1 (CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.1 bits (414), Expect = 5.7e-37
Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDF 60
          M S C FLKSLFGAFLFLG+IWFSFIGVIDNAS ASRR TD+QWK+IG+ KH FHWHSDF
Sbjct: 1  MVSNCRFLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIR 90
          YSVSKRRVPNGPDPIHNRRV NS+QPPIR
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVGNSKQPPIR 89

[Close]

BLAST of Pay0016633 vs. NCBI nr
Match: KAG7033147.1 (CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-36
Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDF 60
          ME  C F + LFG FLFLGIIWFSFIG IDNAS ASRR TDMQWK+IG EKH FHWHSDF
Sbjct: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIR 90
          YSVSKRRVPNGPDPIHNRRVENS+QPP+R
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVENSKQPPVR 89

[Close]

BLAST of Pay0016633 vs. NCBI nr
Match: KAG7016157.1 (ylbH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 7   FLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDFYSVSKR 66
           FLKSLFGAFLFLG+IWFSFIGVIDNAS ASRR TD+QWK+IG+ KH FHWHSDFYSVSKR
Sbjct: 307 FLKSLFGAFLFLGVIWFSFIGVIDNASPASRRATDVQWKMIGRGKHVFHWHSDFYSVSKR 366

Query: 67  RVPNGPDPIHN 78
           RVPNGPDPIHN
Sbjct: 367 RVPNGPDPIHN 377

[Close]

BLAST of Pay0016633 vs. NCBI nr
Match: KAG6602472.1 (CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.0 bits (310), Expect = 6.5e-25
Identity = 62/88 (70.45%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 2   ESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDFY 61
           E+ C  LK+L   +     I+F   G IDNAS ASRR TDMQWK+IG EKH FHWHSDFY
Sbjct: 47  EAAC--LKNLQRKWFLRASIYF---GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFY 106

Query: 62  SVSKRRVPNGPDPIHNRRVENSRQPPIR 90
           SVSKRRVPNGPDPIHNRRVENS+QPP+R
Sbjct: 107 SVSKRRVPNGPDPIHNRRVENSKQPPVR 129

[Close]

BLAST of Pay0016633 vs. TAIR 10
Match: AT3G28455.1 (CLAVATA3/ESR-RELATED 25 )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 8  LKSLFGAFLFLGIIWFSFIGVIDN-ASLASRRETDMQWKLIGKEKHFFHWHSDFYSVSKR 67
          +++L G    LG+I F  +G++ N A      E     +  GK+ + FH       VSKR
Sbjct: 6  IRALVGVIASLGLIVFLLVGILANSAPSVPSSENVKTLRFSGKDVNLFH-------VSKR 65

Query: 68 RVPNGPDPIHNRRVENSRQPP 88
          +VPNGPDPIHNR+ E SR+PP
Sbjct: 66 KVPNGPDPIHNRKAETSRRPP 79

[Close]

BLAST of Pay0016633 vs. TAIR 10
Match: AT1G69970.2 (CLAVATA3/ESR-RELATED 26 )

HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 0


Query: 61  YSVSKRRVPNGPDPIHNRRVENSRQPPIR 90
           Y  SKR+VP GPDPIHNRR  NSR+PP R
Sbjct: 73  YVASKRKVPRGPDPIHNRRAGNSRRPPGR 101

The following BLAST results are available for this feature:

BLAST of Pay0016633 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFL4	3.0e-09	41.98	CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana OX=3702 GN=CLE25 P...	[more]

BLAST of Pay0016633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS32	6.1e-45	98.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633230 PE=4 SV=1	[more]
A0A6J1HAQ4	5.4e-25	87.30	uncharacterized protein LOC111461653 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HAS8	5.4e-25	87.30	uncharacterized protein LOC111461653 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7T759	4.4e-19	100.00	CLAVATA3/ESR (CLE)-related protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J5WYJ6	3.1e-17	52.63	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23893 PE=4 S...	[more]

BLAST of Pay0016633 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52425.1	1.3e-44	98.89	hypothetical protein Csa_008367 [Cucumis sativus]	[more]
KAG6578608.1	5.7e-37	85.39	CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7033147.1	3.7e-36	83.15	CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG7016157.1	2.5e-29	88.73	ylbH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602472.1	6.5e-25	70.45	CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Pay0016633 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28455.1	2.2e-10	41.98	CLAVATA3/ESR-RELATED 25	[more]
AT1G69970.2	5.5e-06	72.41	CLAVATA3/ESR-RELATED 26	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..90
None	No IPR available	PANTHER	PTHR34277:SF18	CLAVATA3/ESR (CLE)-RELATED PROTEIN 25	coord: 1..89
IPR039316	CLAVATA3/ESR (CLE)-related protein 25/26	PANTHER	PTHR34277	CLAVATA3/ESR (CLE)-RELATED PROTEIN 26	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016633.1	Pay0016633.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045168	cell-cell signaling involved in cell fate commitment
cellular_component	GO:0016021	integral component of membrane