Pay0016353 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016353
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag-pol polyprotein
Location	chr08: 15652189 .. 15652675 (+)
RNA-Seq Expression	Pay0016353
Synteny	Pay0016353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCAGAATTTGAAATGAGCATGGTAGGAGAACTTTCTTGTTTTCTAGGTCTACAGATCAAACAAAGAAGTATATTTATATCTCAAGAGAAGTATGTCAAGAACTTAGTCAAAAAATTTGGTCTGGATCAGTGTCAACATAAAAGGACTTCAGTGGCGACACATGTTAAAGTTACTAAAGACATTAATGGTACAGTAGTAGATCACAAACTGTATAGAAGCTTGGTTGGGAGTCTTCTATATTTAATGGCAAGCAAACTTGACATTGCCTATGCTGTTGGAATATGTGCTCGATTTCAGTCAGATCCTCGTACTTCTCATTTGACCGTTGTTAAACGGATTCTCAAATATGTACATGGGACGAGTGACTTTGGAATTTTGTATTCATTTGACACGACTTCTACCTTGGTTGGATATTGTGATGCTGATTGGGCTGGTTCTCCAGATGATAGGAAAAGCACTTCTGGAGGTTGTTTCTTTGTAG

mRNA sequence

ATGAAATCAGAATTTGAAATGAGCATGGTAGGAGAACTTTCTTGTTTTCTAGGTCTACAGATCAAACAAAGAAGTATATTTATATCTCAAGAGAAGTATGTCAAGAACTTAGTCAAAAAATTTGGTCTGGATCAGTGTCAACATAAAAGGACTTCAGTGGCGACACATGTTAAAGTTACTAAAGACATTAATGGTACAGTAGTAGATCACAAACTGTATAGAAGCTTGGTTGGGAGTCTTCTATATTTAATGGCAAGCAAACTTGACATTGCCTATGCTGTTGGAATATGTGCTCGATTTCAGTCAGATCCTCTGACTTTGGAATTTTGTATTCATTTGACACGACTTCTACCTTGGTTGGATATTGTGATGCTGATTGGGCTGGTTCTCCAGATGATAGGAAAAGCACTTCTGGAGGTTGTTTCTTTGTAG

Coding sequence (CDS)

ATGAAATCAGAATTTGAAATGAGCATGGTAGGAGAACTTTCTTGTTTTCTAGGTCTACAGATCAAACAAAGAAGTATATTTATATCTCAAGAGAAGTATGTCAAGAACTTAGTCAAAAAATTTGGTCTGGATCAGTGTCAACATAAAAGGACTTCAGTGGCGACACATGTTAAAGTTACTAAAGACATTAATGGTACAGTAGTAGATCACAAACTGTATAGAAGCTTGGTTGGGAGTCTTCTATATTTAATGGCAAGCAAACTTGACATTGCCTATGCTGTTGGAATATGTGCTCGATTTCAGTCAGATCCTCTGACTTTGGAATTTTGTATTCATTTGACACGACTTCTACCTTGGTTGGATATTGTGATGCTGATTGGGCTGGTTCTCCAGATGATAGGAAAAGCACTTCTGGAGGTTGTTTCTTTGTAG

Protein sequence

MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLTLEFCIHLTRLLPWLDIVMLIGLVLQMIGKALLEVVSL

Homology

[Close]

BLAST of Pay0016353 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.5e-10
Identity = 38/115 (33.04%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 1    MKSEFEMSMVGELSCFLGLQI----KQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATH 60
            +   F+M  +G     LG++I      R +++SQEKY++ ++++F +   +   T +A H
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088

Query: 61   VKVTKDINGTVVDHK------LYRSLVGSLLYLM-ASKLDIAYAVGICARFQSDP 105
            +K++K +  T V+ K       Y S VGSL+Y M  ++ DIA+AVG+ +RF  +P
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENP 1143

[Close]

BLAST of Pay0016353 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-07
Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQR--SIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           + S F M  +G +  FLG+QIK     +F+SQ KY + ++   G+  C  K  S    +K
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDC--KPMSTPLPLK 86

Query: 61  VTKDIN-GTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLTLEFCIHLTRLL 120
           +   ++     D   +RS+VG+L YL  ++ DI+YAV I  +   +P   +F + L R+L
Sbjct: 87  LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDL-LKRVL 146

Query: 121 PWLDIVMLIGLVLQMIGK 136
            ++   +  GL +    K
Sbjct: 147 RYVKGTIFHGLYIHKNSK 161

[Close]

BLAST of Pay0016353 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.4e-05
Identity = 36/122 (29.51%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 1    MKSEFEMSMVGELSCFLGLQIKQ--RSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
            +   F +    EL  FLG++ K+    + +SQ +Y+ +L+ +  +   +   T +A   K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 61   VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLTLEFCIHLTRLLP 120
            ++      + D   YR +VGSL YL  ++ DI+YAV   ++F   P T E    L R+L 
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMP-TEEHLQALKRILR 1290

[Close]

BLAST of Pay0016353 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04
Identity = 29/106 (27.36%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 1    MKSEFEMSMVGELSCFLGLQIKQ--RSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
            +   F +    +L  FLG++ K+  + + +SQ +Y  +L+ +  +   +   T +AT  K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 61   VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDP 105
            +T      + D   YR +VGSL YL  ++ D++YAV   +++   P
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMP 1259

[Close]

BLAST of Pay0016353 vs. ExPASy TrEMBL
Match: A0A1S4DU18 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107990544 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.0e-55
Identity = 126/163 (77.30%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           MKS+FEMSMVGELSCFL LQIKQRS  IFISQEKY KN+VKKFGLDQCQHKRT  ATHVK
Sbjct: 1   MKSDFEMSMVGELSCFLSLQIKQRSEGIFISQEKYAKNVVKKFGLDQCQHKRTPTATHVK 60

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPL------------- 120
           VTKD+NGTVVDHKLYRS+VGSLLYL  S+LDIAYAVGICARFQSDP              
Sbjct: 61  VTKDVNGTVVDHKLYRSMVGSLLYLTTSRLDIAYAVGICARFQSDPRSSYLTAVKRILKY 120

Query: 121 ---TLEF--CIHLTRLLPWLDIVMLIGLVLQMIGKALLEVVSL 144
              T +F  CI LT+ LPWLDIVMLIGLVLQMIGKALLEVVSL
Sbjct: 121 VHGTSDFGICILLTQPLPWLDIVMLIGLVLQMIGKALLEVVSL 163

[Close]

BLAST of Pay0016353 vs. ExPASy TrEMBL
Match: A0A5D3DF22 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00530 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 122/160 (76.25%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           MKS+FEMSMVGELSCFL LQIKQRS  IFISQEKY KN+VKKFGLDQCQHKRT  ATHVK
Sbjct: 223 MKSDFEMSMVGELSCFLSLQIKQRSEGIFISQEKYAKNVVKKFGLDQCQHKRTPTATHVK 282

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPL------------- 120
           VTKD+NGTVVDHKLYRS+VGSLLYL  S+LDIAYAVGICARFQSDP              
Sbjct: 283 VTKDVNGTVVDHKLYRSMVGSLLYLTTSRLDIAYAVGICARFQSDPRSSYLTAVKRILKY 342

Query: 121 ---TLEF--CIHLTRLLPWLDIVMLIGLVLQMIGKALLEV 141
              T +F  CI LT+ LPWLDIVMLIGLVLQMIGKALLE+
Sbjct: 343 VHGTSDFGICILLTQPLPWLDIVMLIGLVLQMIGKALLEL 382

[Close]

BLAST of Pay0016353 vs. ExPASy TrEMBL
Match: A0A5A7SMF2 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00240 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.3e-51
Identity = 118/159 (74.21%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           MKS+FEMSMV ELSCFL LQIKQRS  IFISQEKY KN+VKKFGLDQCQHKRT  ATHVK
Sbjct: 163 MKSDFEMSMVEELSCFLSLQIKQRSEGIFISQEKYAKNVVKKFGLDQCQHKRTPAATHVK 222

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLT------------ 120
           VTKD+NGTVVDHKLYRS+VGSLLYL AS+LDIAYAVGICARFQS P +            
Sbjct: 223 VTKDVNGTVVDHKLYRSMVGSLLYLTASRLDIAYAVGICARFQSYPRSSSLTVVKRILKY 282

Query: 121 ------LEFCIHLTRLLPWLDIVMLIGLVLQMIGKALLE 140
                    CI LT+ LPWLDIVMLI LVLQMIGKALLE
Sbjct: 283 VHGMSDFGICILLTQPLPWLDIVMLIRLVLQMIGKALLE 321

[Close]

BLAST of Pay0016353 vs. ExPASy TrEMBL
Match: A0A5A7SXM5 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00750 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.4e-50
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 60
           MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT
Sbjct: 269 MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 328

Query: 61  KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLT 107
           KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDP T
Sbjct: 329 KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRT 374

[Close]

BLAST of Pay0016353 vs. ExPASy TrEMBL
Match: A0A5D3E1T0 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00520 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.0e-49
Identity = 107/120 (89.17%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 60
           MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT
Sbjct: 517 MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 576

Query: 61  KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLTLEFCIHLTRLLPWL 120
           KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDP T    + + R+L ++
Sbjct: 577 KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTV-VKRILKYV 635

[Close]

BLAST of Pay0016353 vs. NCBI nr
Match: XP_016899484.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 126/163 (77.30%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           MKS+FEMSMVGELSCFL LQIKQRS  IFISQEKY KN+VKKFGLDQCQHKRT  ATHVK
Sbjct: 1   MKSDFEMSMVGELSCFLSLQIKQRSEGIFISQEKYAKNVVKKFGLDQCQHKRTPTATHVK 60

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPL------------- 120
           VTKD+NGTVVDHKLYRS+VGSLLYL  S+LDIAYAVGICARFQSDP              
Sbjct: 61  VTKDVNGTVVDHKLYRSMVGSLLYLTTSRLDIAYAVGICARFQSDPRSSYLTAVKRILKY 120

Query: 121 ---TLEF--CIHLTRLLPWLDIVMLIGLVLQMIGKALLEVVSL 144
              T +F  CI LT+ LPWLDIVMLIGLVLQMIGKALLEVVSL
Sbjct: 121 VHGTSDFGICILLTQPLPWLDIVMLIGLVLQMIGKALLEVVSL 163

[Close]

BLAST of Pay0016353 vs. NCBI nr
Match: TYK22184.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 218.4 bits (555), Expect = 4.0e-53
Identity = 122/160 (76.25%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           MKS+FEMSMVGELSCFL LQIKQRS  IFISQEKY KN+VKKFGLDQCQHKRT  ATHVK
Sbjct: 223 MKSDFEMSMVGELSCFLSLQIKQRSEGIFISQEKYAKNVVKKFGLDQCQHKRTPTATHVK 282

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPL------------- 120
           VTKD+NGTVVDHKLYRS+VGSLLYL  S+LDIAYAVGICARFQSDP              
Sbjct: 283 VTKDVNGTVVDHKLYRSMVGSLLYLTTSRLDIAYAVGICARFQSDPRSSYLTAVKRILKY 342

Query: 121 ---TLEF--CIHLTRLLPWLDIVMLIGLVLQMIGKALLEV 141
              T +F  CI LT+ LPWLDIVMLIGLVLQMIGKALLE+
Sbjct: 343 VHGTSDFGICILLTQPLPWLDIVMLIGLVLQMIGKALLEL 382

[Close]

BLAST of Pay0016353 vs. NCBI nr
Match: KAA0032212.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50
Identity = 118/159 (74.21%), Postives = 125/159 (78.62%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           MKS+FEMSMV ELSCFL LQIKQRS  IFISQEKY KN+VKKFGLDQCQHKRT  ATHVK
Sbjct: 163 MKSDFEMSMVEELSCFLSLQIKQRSEGIFISQEKYAKNVVKKFGLDQCQHKRTPAATHVK 222

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLT------------ 120
           VTKD+NGTVVDHKLYRS+VGSLLYL AS+LDIAYAVGICARFQS P +            
Sbjct: 223 VTKDVNGTVVDHKLYRSMVGSLLYLTASRLDIAYAVGICARFQSYPRSSSLTVVKRILKY 282

Query: 121 ------LEFCIHLTRLLPWLDIVMLIGLVLQMIGKALLE 140
                    CI LT+ LPWLDIVMLI LVLQMIGKALLE
Sbjct: 283 VHGMSDFGICILLTQPLPWLDIVMLIRLVLQMIGKALLE 321

[Close]

BLAST of Pay0016353 vs. NCBI nr
Match: KAA0035790.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 207.6 bits (527), Expect = 7.1e-50
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 60
           MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT
Sbjct: 269 MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 328

Query: 61  KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLT 107
           KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDP T
Sbjct: 329 KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRT 374

[Close]

BLAST of Pay0016353 vs. NCBI nr
Match: TYK29824.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49
Identity = 107/120 (89.17%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 60
           MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT
Sbjct: 517 MKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVT 576

Query: 61  KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLTLEFCIHLTRLLPWL 120
           KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDP T    + + R+L ++
Sbjct: 577 KDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTV-VKRILKYV 635

[Close]

BLAST of Pay0016353 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           +KS F++  +G L  FLGL+I + +  I I Q KY  +L+ + GL  C+     +   V 
Sbjct: 304 LKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVT 363

Query: 61  VTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDP 105
            +    G  VD K YR L+G L+YL  ++LDI++AV   ++F   P
Sbjct: 364 FSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 409

[Close]

BLAST of Pay0016353 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.5e-08
Identity = 42/138 (30.43%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 1   MKSEFEMSMVGELSCFLGLQIKQR--SIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVK 60
           + S F M  +G +  FLG+QIK     +F+SQ KY + ++   G+  C  K  S    +K
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDC--KPMSTPLPLK 86

Query: 61  VTKDIN-GTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPLTLEFCIHLTRLL 120
           +   ++     D   +RS+VG+L YL  ++ DI+YAV I  +   +P   +F + L R+L
Sbjct: 87  LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDL-LKRVL 146

Query: 121 PWLDIVMLIGLVLQMIGK 136
            ++   +  GL +    K
Sbjct: 147 RYVKGTIFHGLYIHKNSK 161

The following BLAST results are available for this feature:

BLAST of Pay0016353 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.5e-10	33.04	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	7.7e-07	30.43	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	9.4e-05	29.51	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.6e-04	27.36	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Pay0016353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DU18	6.0e-55	77.30	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3DF22	1.9e-53	76.25	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SMF2	5.3e-51	74.21	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7SXM5	3.4e-50	99.06	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3E1T0	1.0e-49	89.17	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Pay0016353 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899484.1	1.2e-54	77.30	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
TYK22184.1	4.0e-53	76.25	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0032212.1	1.1e-50	74.21	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0035790.1	7.1e-50	99.06	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK29824.1	2.1e-49	89.17	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0016353 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.0e-10	35.85	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.5e-08	30.43	DNA/RNA polymerases superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016353.1	Pay0016353.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding