Pay0016280 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016280
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transposase
Location	chr11: 12611452 .. 12611899 (+)
RNA-Seq Expression	Pay0016280
Synteny	Pay0016280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATGTGACACGTGTTCGAAGCGAAGGTGAGAGAAAATTGGTTGAATACAATGAAGATGGGGTACCCATTGGAGAAAATGGGGTGAAGCTTAACTCTTTTATCGGGTCGTGTGTACACTACCACATCCCCATTATCTATGCAACATGGATAGATGTGCCTGCAAAATTGAAGGAAAAGATATATACCATAGTTGAGGTAAATTTAATTATAGTAATTTTTGTACAAGTTTATTTAAATTGGCAATATAACACCAACTGATCTTCAATCTCAGGCTGCATTTATAATCGACAATAGATCTAGGAAGAGAATTCTTAAGACTGCAGGAACAACATTCCGGTCACTTAAGCATTGATTGATGAAGAGGCATATCTTGCCTTTTAGGAATGAACTTGAACTCTTGAAACGACCACCGGACATGTATTGTTATATTGACCAAAAATAG

mRNA sequence

ATGTTTGATGTGACACGTGTTCGAAGCGAAGGTGAGAGAAAATTGGTTGAATACAATGAAGATGGGGTACCCATTGGAGAAAATGGGGTGAAGCTTAACTCTTTTATCGGGTCGTGTGTACACTACCACATCCCCATTATCTATGCAACATGGATAGATGTGCCTGCAAAATTGAAGGAAAAGATATATACCATAGTTGAGGCTGCATTTATAATCGACAATAGATCTAGGAAGAGAATTCTTAAGACTGCAGGAACAACATTCCGGAATGAACTTGAACTCTTGAAACGACCACCGGACATGTATTGTTATATTGACCAAAAATAG

Coding sequence (CDS)

ATGTTTGATGTGACACGTGTTCGAAGCGAAGGTGAGAGAAAATTGGTTGAATACAATGAAGATGGGGTACCCATTGGAGAAAATGGGGTGAAGCTTAACTCTTTTATCGGGTCGTGTGTACACTACCACATCCCCATTATCTATGCAACATGGATAGATGTGCCTGCAAAATTGAAGGAAAAGATATATACCATAGTTGAGGCTGCATTTATAATCGACAATAGATCTAGGAAGAGAATTCTTAAGACTGCAGGAACAACATTCCGGAATGAACTTGAACTCTTGAAACGACCACCGGACATGTATTGTTATATTGACCAAAAATAG

Protein sequence

MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKEKIYTIVEAAFIIDNRSRKRILKTAGTTFRNELELLKRPPDMYCYIDQK

Homology

[Close]

BLAST of Pay0016280 vs. ExPASy TrEMBL
Match: A0A5A7UDE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00580 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 104/123 (84.55%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE
Sbjct: 315 MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 374

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVEAAFIIDNRSRK ILKTAGTTFR               NE ELLKRPP MY YI
Sbjct: 375 KIYTIVEAAFIIDNRSRKSILKTAGTTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYI 434

[Close]

BLAST of Pay0016280 vs. ExPASy TrEMBL
Match: A0A5A7TUX7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 98/123 (79.67%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVT VRSEGERKLVEYNEDGVPIGENG KLNSFIGSCVHYHIPIIYATWIDVPA+LKE
Sbjct: 470 MFDVTHVRSEGERKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKE 529

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVE AFIIDNRSRK ILKTAGT FR               NE  LLKRPP MY YI
Sbjct: 530 KIYTIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYI 589

[Close]

BLAST of Pay0016280 vs. ExPASy TrEMBL
Match: A0A5D3BVS7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 98/123 (79.67%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVT VRSEGERKLVEYNEDGVPIGENG KLNSFIGSCVHYHIPIIYATWIDVPA+LKE
Sbjct: 470 MFDVTHVRSEGERKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKE 529

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVE AFIIDNRSRK ILKTAGT FR               NE  LLKRPP MY YI
Sbjct: 530 KIYTIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYI 589

[Close]

BLAST of Pay0016280 vs. ExPASy TrEMBL
Match: A0A5D3CUP0 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001510 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 97/123 (78.86%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVTRVRSEGERKLVEYNEDGVPIGENG KLNSFI SCVHYHIPIIYATWIDV A+LKE
Sbjct: 600 MFDVTRVRSEGERKLVEYNEDGVPIGENGAKLNSFIRSCVHYHIPIIYATWIDVLAELKE 659

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVEAAFIIDNRSRK ILKTA T FR               N+ ELLKRPP MY YI
Sbjct: 660 KIYTIVEAAFIIDNRSRKSILKTARTAFRQFKHWLTKKYILPFKNKPELLKRPPYMYSYI 719

[Close]

BLAST of Pay0016280 vs. ExPASy TrEMBL
Match: A0A5A7T6M0 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00290 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 97/123 (78.86%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVTRVRSEGERKLVEYNEDGVPIGENG KLNSFI SCVHYHIPIIYATWIDV A+LKE
Sbjct: 45  MFDVTRVRSEGERKLVEYNEDGVPIGENGAKLNSFIRSCVHYHIPIIYATWIDVLAELKE 104

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVEAAFIIDNRSRK ILKTA T FR               N+ ELLKRPP MY YI
Sbjct: 105 KIYTIVEAAFIIDNRSRKSILKTARTAFRQFKHWLTKKYILPFKNKPELLKRPPYMYSYI 164

[Close]

BLAST of Pay0016280 vs. NCBI nr
Match: KAA0053264.1 (uncharacterized protein E6C27_scaffold102G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 2.9e-48
Identity = 104/123 (84.55%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE
Sbjct: 315 MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 374

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVEAAFIIDNRSRK ILKTAGTTFR               NE ELLKRPP MY YI
Sbjct: 375 KIYTIVEAAFIIDNRSRKSILKTAGTTFRQFKHWLTKKYILPFKNEPELLKRPPYMYSYI 434

[Close]

BLAST of Pay0016280 vs. NCBI nr
Match: TYK03264.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 5.2e-45
Identity = 98/123 (79.67%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVT VRSEGERKLVEYNEDGVPIGENG KLNSFIGSCVHYHIPIIYATWIDVPA+LKE
Sbjct: 470 MFDVTHVRSEGERKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKE 529

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVE AFIIDNRSRK ILKTAGT FR               NE  LLKRPP MY YI
Sbjct: 530 KIYTIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYI 589

[Close]

BLAST of Pay0016280 vs. NCBI nr
Match: KAA0046884.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 5.2e-45
Identity = 98/123 (79.67%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVT VRSEGERKLVEYNEDGVPIGENG KLNSFIGSCVHYHIPIIYATWIDVPA+LKE
Sbjct: 470 MFDVTHVRSEGERKLVEYNEDGVPIGENGAKLNSFIGSCVHYHIPIIYATWIDVPAELKE 529

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVE AFIIDNRSRK ILKTAGT FR               NE  LLKRPP MY YI
Sbjct: 530 KIYTIVETAFIIDNRSRKSILKTAGTAFRQFKHWLTKKYILPFKNEPTLLKRPPYMYSYI 589

[Close]

BLAST of Pay0016280 vs. NCBI nr
Match: KAA0037125.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 97/123 (78.86%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVTRVRSEGERKLVEYNEDGVPIGENG KLNSFI SCVHYHIPIIYATWIDV A+LKE
Sbjct: 45  MFDVTRVRSEGERKLVEYNEDGVPIGENGAKLNSFIRSCVHYHIPIIYATWIDVLAELKE 104

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVEAAFIIDNRSRK ILKTA T FR               N+ ELLKRPP MY YI
Sbjct: 105 KIYTIVEAAFIIDNRSRKSILKTARTAFRQFKHWLTKKYILPFKNKPELLKRPPYMYSYI 164

[Close]

BLAST of Pay0016280 vs. NCBI nr
Match: TYK13949.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 97/123 (78.86%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MFDVTRVRSEGERKLVEYNEDGVPIGENGVKLNSFIGSCVHYHIPIIYATWIDVPAKLKE 60
           MFDVTRVRSEGERKLVEYNEDGVPIGENG KLNSFI SCVHYHIPIIYATWIDV A+LKE
Sbjct: 600 MFDVTRVRSEGERKLVEYNEDGVPIGENGAKLNSFIRSCVHYHIPIIYATWIDVLAELKE 659

Query: 61  KIYTIVEAAFIIDNRSRKRILKTAGTTFR---------------NELELLKRPPDMYCYI 109
           KIYTIVEAAFIIDNRSRK ILKTA T FR               N+ ELLKRPP MY YI
Sbjct: 660 KIYTIVEAAFIIDNRSRKSILKTARTAFRQFKHWLTKKYILPFKNKPELLKRPPYMYSYI 719

The following BLAST results are available for this feature:

BLAST of Pay0016280 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0016280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDE2	1.4e-48	84.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TUX7	2.5e-45	79.67	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE...	[more]
A0A5D3BVS7	2.5e-45	79.67	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE...	[more]
A0A5D3CUP0	1.4e-43	78.86	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001510 P...	[more]
A0A5A7T6M0	1.4e-43	78.86	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Pay0016280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053264.1	2.9e-48	84.55	uncharacterized protein E6C27_scaffold102G00580 [Cucumis melo var. makuwa]	[more]
TYK03264.1	5.2e-45	79.67	transposase [Cucumis melo var. makuwa]	[more]
KAA0046884.1	5.2e-45	79.67	transposase [Cucumis melo var. makuwa]	[more]
KAA0037125.1	2.8e-43	78.86	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
TYK13949.1	2.8e-43	78.86	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Pay0016280 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33144:SF22	PLANT TRANSPOSASE (PTTA/EN/SPM FAMILY)	coord: 9..90
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 9..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016280.1	Pay0016280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006508	proteolysis
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding