Pay0015937 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015937
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 26682554 .. 26684729 (+)
RNA-Seq Expression	Pay0015937
Synteny	Pay0015937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCCGACCAGAATATGAATCTGTTCGTGCTGCTATATTACATCGTAACCCCTGCCTTCTCTTGACGCTGTTGTTCAGGATATCTTATTTAAGGAAAAAAGACTTAGCATTGTCTCCACTCTGCCCTCTGACGTTGCTCTTGCCACTACTTATCTTCGACAAACTAATGAGACCAGTTTCTGCAAGAATTATAAACTTCATGGCCATAAGTTTGCTAATTGTCCTACCATTGAGTGCAGGTATTGTCACAAACGAGGTCACATTTTGGATCATTGTTCAACTCGTCCACCCCGCCCCTCTGGTCACTCACACAAACCCAATTTCTCCTCTAAAGTTGGTTCTCCATATGTTGTTGCTGCTACACCATTTGATATCACTACACCTTCGAGCCTTCAGTTAATTGATCTTCATGATTTACAAAAACTAGTGATCTCTTCCAACTCTACCGCTCTTGCTGTCACCCCAGGTATCTCTTGGCTCCTTGACTCGACTTGTTGTAATCACATGACTTCTGACATTTCATTGTTATCCTCTCATATTTCTGTTCACTCACTTCCTCTAATTCACTCTGCTGATGGTAATCACATGTATATTTCCCACATTGGCACTGTTAATACACCCACCATAAAACTTTTCAACACCTACCATGTCCCCAATCTTACATTCAAACTAGCATCTGTTGGCCAATCATGTGATCTCAAACTTACTATTGTCTTTTCTTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGTGACGAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCTCTACAGCACTCTTCTATGTTCCCAACCATCTCTGCTCCAGCCACTAATAACACTATATTTTAGTGGCATCTTCGTCTAGGTCATGCATCCTCTGATAAACTCCGTAGTTTAGCTTCTAATGGTATGTTGAATAATGTTTCTAAGTTTAGCACTCTTGACTGTTTAAATTGCAAACTAGCAAAACAACCTACTTTGTCCTTTCCTAATTCTGCTTATTTATGTGATAAATATTTTGGCCTAATTCACTATGATATTTGGGGACCTGCTCCATGTGCTATGGTCAATGGTTATCGATATTTTGTTTTATTTATTGATGACTATTCTCGTTTTACTTGGATTTACTTTCTTAAAAATCGTTCCTCCTTATATCAAATATATATTGAGTTTGCCAACATGGTCCAAACACAATTTTCCAGCACCATTAAAATTCTTCGCACCGATAATGCAATGGAGTACAAGGACTATCGCTTTCTTTGCTTCCTTGCCCAACAAGGCACTTTGATTCAATGCTCATGTTCTCACACCTCCCAGTAAAATGGACGAGCAGAACGCAAACACCGTTACATTCTAGACTCTGTTCGTGCTCAACTCCTCTCTGCCTCATGCCTTGAAAAATTTTGGGCAGAGGCCGTCCTCACCTCTGTTTATGTCATCAATCGCCTTTCATATCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTTCTCCCTCTTACTCTAATCTCAAAGTCATTGGTTGTGCATGTTTTGTATTATTACATCCTCATGAACATACAAAACTCGAACCTCGTGCTCGTCTATGTTGTTTCTTGGGTTATGGCACTGAACATAAAGGTTTTCGTTGTTGGATCTTATCTCTCAACGATTACGTATTTCTCACAACTACTTTCTTGGTCTTGAGATCTCATCATCACCCAGTGGCTACTATTTATCTCAAGCAAAATATGCTTCTGACCACCTCAATCAATATGGTATTACTGATATTGCTACATCCTCAACACCTTTGGATCCCAATGTGCACCTCACTCCTTTTGATGATGTTCCTTTTGATGATCCCACCTTATATCGACAACTTATTGGCAGCCTAATTTACTTAACTGTGACTTGTCCAGATATTGCATATGCAATTCACATTGTTAGTCAATTCATGACTGCTCCTCGTACAATTCACTTCACTATCGTCCTTCATATTCTTCGCTACATTAAAGGCACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTTTGGATTCTCTGATGCTGATTGGACAGACGATCCTACTGATAGACGGTCTACAACTGATTATTGCTTCTATCTAGGTGACGCTCTTATCTTCTAA

mRNA sequence

ATGGGTCTCCGACCAGAATATGAATCTGTTCGTGCTGCTATATTACATCGTAACCCCTGCCTTCTCTTGACGCTGTTGTTCAGGATATCTTATTTAAGGAAAAAAGACTTAGCATTGTCTCCACTCTGCCCTCTGACGTTGCTCTTGCCACTACTTATCTTCGACAAACTAATGAGACCAGTTTCTGCAAGAATTATAAACTTCATGGCCATAATTGGTTCTCCATATGTTGTTGCTGCTACACCATTTGATATCACTACACCTTCGAGCCTTCAGTTAATTGATCTTCATGATTTACAAAAACTAGTGATCTCTTCCAACTCTACCGCTCTTGCTGTCACCCCAGGTTCAGGATTCTCAGACGTGACGAGTGATTGGTTTTCGTTGTTGGATCTTATCTCTCAACGATTACGTATTTCTCACAACTACTTTCTTGGTCTTGAGATCTCATCATCACCCAGTGGCTACTATTTATCTCAAGCAAAATATGCTTCTGACCACCTCAATCAATATGGTATTACTGATATTGCTACATCCTCAACACCTTTGGATCCCAATGTGCACCTCACTCCTTTTGATGATGTTCCTTTTGATGATCCCACCTTATATCGACAACTTATTGGCAGCCTAATTTACTTAACTGTGACTTGTCCAGATATTGCATATGCAATTCACATTGTTAGTCAATTCATGACTGCTCCTCGTACAATTCACTTCACTATCGTCCTTCATATTCTTCGCTACATTAAAGGCACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTTTGGATTCTCTGATGCTGATTGGACAGACGATCCTACTGATAGACGGTCTACAACTGATTATTGCTTCTATCTAGGTGACGCTCTTATCTTCTAA

Coding sequence (CDS)

ATGGGTCTCCGACCAGAATATGAATCTGTTCGTGCTGCTATATTACATCGTAACCCCTGCCTTCTCTTGACGCTGTTGTTCAGGATATCTTATTTAAGGAAAAAAGACTTAGCATTGTCTCCACTCTGCCCTCTGACGTTGCTCTTGCCACTACTTATCTTCGACAAACTAATGAGACCAGTTTCTGCAAGAATTATAAACTTCATGGCCATAATTGGTTCTCCATATGTTGTTGCTGCTACACCATTTGATATCACTACACCTTCGAGCCTTCAGTTAATTGATCTTCATGATTTACAAAAACTAGTGATCTCTTCCAACTCTACCGCTCTTGCTGTCACCCCAGGTTCAGGATTCTCAGACGTGACGAGTGATTGGTTTTCGTTGTTGGATCTTATCTCTCAACGATTACGTATTTCTCACAACTACTTTCTTGGTCTTGAGATCTCATCATCACCCAGTGGCTACTATTTATCTCAAGCAAAATATGCTTCTGACCACCTCAATCAATATGGTATTACTGATATTGCTACATCCTCAACACCTTTGGATCCCAATGTGCACCTCACTCCTTTTGATGATGTTCCTTTTGATGATCCCACCTTATATCGACAACTTATTGGCAGCCTAATTTACTTAACTGTGACTTGTCCAGATATTGCATATGCAATTCACATTGTTAGTCAATTCATGACTGCTCCTCGTACAATTCACTTCACTATCGTCCTTCATATTCTTCGCTACATTAAAGGCACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTTTGGATTCTCTGATGCTGATTGGACAGACGATCCTACTGATAGACGGTCTACAACTGATTATTGCTTCTATCTAGGTGACGCTCTTATCTTCTAA

Protein sequence

MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPLLIFDKLMRPVSARIINFMAIIGSPYVVAATPFDITTPSSLQLIDLHDLQKLVISSNSTALAVTPGSGFSDVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPTLYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSSQSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALIF

Homology

[Close]

BLAST of Pay0015937 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           +YFLG++I + PSG +LSQ KYA   LN  G+ D    STPL   ++ +      + DP+
Sbjct: 40  HYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPS 99

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
            +R ++G+L YLT+T PDI+YA++IV Q M  P    F ++  +LRY+KGT+ HGL    
Sbjct: 100 DFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
            S L +  F D+DW    + RRSTT +C +LG  +I
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNII 194

[Close]

BLAST of Pay0015937 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.4e-26
Identity = 67/168 (39.88%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 130  LDLISQRLRISH----NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDP 189
            LD +SQR  +      +YFLG+E    P+G +LSQ +Y  D L +  +      +TP+ P
Sbjct: 1168 LDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAP 1227

Query: 190  NVHLTPFDDVPFDDPTLYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHI 249
            +  L+ +      DPT YR ++GSL YL  T PDI+YA++ +SQFM  P   H   +  I
Sbjct: 1228 SPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRI 1287

Query: 250  LRYIKGTLGHGLQFSSQSSLVLFGFSDADWTDDPTDRRSTTDYCFYLG 294
            LRY+ GT  HG+     ++L L  +SDADW  D  D  ST  Y  YLG
Sbjct: 1288 LRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLG 1335

[Close]

BLAST of Pay0015937 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-25
Identity = 64/168 (38.10%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 130  LDLISQRLRISH----NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDP 189
            LD +SQR  +      +YFLG+E    P G +LSQ +Y  D L +  +      +TP+  
Sbjct: 1151 LDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMAT 1210

Query: 190  NVHLTPFDDVPFDDPTLYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHI 249
            +  LT        DPT YR ++GSL YL  T PD++YA++ +SQ+M  P   H+  +  +
Sbjct: 1211 SPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1270

Query: 250  LRYIKGTLGHGLQFSSQSSLVLFGFSDADWTDDPTDRRSTTDYCFYLG 294
            LRY+ GT  HG+     ++L L  +SDADW  D  D  ST  Y  YLG
Sbjct: 1271 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLG 1318

[Close]

BLAST of Pay0015937 vs. ExPASy Swiss-Prot
Match: P93290 (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 211 IYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSSQSSLVLFGF 270
           +YLT+T PD+ +A++ +SQF +A RT     V  +L Y+KGT+G GL +S+ S L L  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 271 SDADWTDDPTDRRSTTDYC 290
           +D+DW   P  RRS T +C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of Pay0015937 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.7e-13
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 203 YRQLIGSLIYL-TVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 262
           Y   +G+++YL  VT PD+A A+ ++SQF + P   H+  +  +LRY++ T  +GL+F+ 
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 263 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
             +  L G+SDADW  D   RRST+ Y F L    +
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCV 101

[Close]

BLAST of Pay0015937 vs. ExPASy TrEMBL
Match: A0A1S4E4E9 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992037 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.6e-94
Identity = 196/274 (71.53%), Postives = 205/274 (74.82%), Query Frame = 0


Query: 1   MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPLLIFDKLMRP 60
           MGLRPEYESVR A+LHRN                      PL  L   +  ++F++    
Sbjct: 1   MGLRPEYESVRVALLHRN----------------------PLPSLNAAVQDILFEE---- 60

Query: 61  VSARIINFMAIIGSPYVVAATPFDITTPSSLQLIDLHDLQKLVISSNSTALAVTPGSGFS 120
                               TP DITTPSSLQL DLH+L KLV S NS ALAVTPG GFS
Sbjct: 61  ------------------KTTPSDITTPSSLQLTDLHELPKLVFSFNSIALAVTPGLGFS 120

Query: 121 DVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSS 180
           DVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLN+YGITD ATSS
Sbjct: 121 DVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLNRYGITDSATSS 180

Query: 181 TPLDPNVHLTPFDDVPFDDPTLYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFT 240
           TPLDP V L PFD VPFDDPTLYRQL+GSLIYLTVTCPDIAYAIHIVSQFMTA RTIHFT
Sbjct: 181 TPLDPKVRLIPFDGVPFDDPTLYRQLVGSLIYLTVTCPDIAYAIHIVSQFMTASRTIHFT 230

Query: 241 IVLHILRYIKGTLGHGLQFSSQSSLVLFGFSDAD 275
           IVL ILRYIKGTLGHGLQF SQSSLVLFGFSDAD
Sbjct: 241 IVLRILRYIKGTLGHGLQFFSQSSLVLFGFSDAD 230

[Close]

BLAST of Pay0015937 vs. ExPASy TrEMBL
Match: A0A5A7TGJ6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00960 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 4.0e-69
Identity = 136/156 (87.18%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           NYFLGLEISSS SGYYLSQAKYASD +N+ GITD AT STPLDPNV LTPFD VP +DPT
Sbjct: 644 NYFLGLEISSSSSGYYLSQAKYASDLVNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 703

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
           LYRQL+GSLIYLTVT PDIAYAIHIVSQFM APRTIHFT+VL ILRYIKGTLGHGLQFSS
Sbjct: 704 LYRQLVGSLIYLTVTRPDIAYAIHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSS 763

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
           QSSLVL GFSDADW  DPTDRRSTT YCFYLGDALI
Sbjct: 764 QSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI 799

[Close]

BLAST of Pay0015937 vs. ExPASy TrEMBL
Match: A0A5A7TGJ6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00960 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.0e-08
Identity = 61/162 (37.65%), Postives = 70/162 (43.21%), Query Frame = 0


Query: 1   MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPL--------L 60
           MGLRPEYESVRAA+LHRNP   L    +     +K L +       + L           
Sbjct: 1   MGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANET 60

Query: 61  IFDKLMRPVSARIINFMAII-----------------------------------GSPYV 120
           IF K  +    +  N   I                                     S  V
Sbjct: 61  IFCKNCKLHGHKFANCPTIECRYCHKRGHILDTCPTRPPRPPGHSHKPKFSHKAGSSSVV 120

HSP 2 Score: 270.8 bits (691), Expect = 6.9e-69
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 142  NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
            NYFLGLEISSS SGYYLSQAKYASD LN+ GITD AT STPLDPNV LTPFD VP +DPT
Sbjct: 1064 NYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 1123

Query: 202  LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
            LYRQL+GSLIYLTVT PDIAYA+HIVSQFM APRTIHFT VL ILRYIKGTLGHGLQFSS
Sbjct: 1124 LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSS 1183

Query: 262  QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
            QSSLVL GFSDADW  DPTDRRSTT YCFYLGDALI
Sbjct: 1184 QSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI 1219

[Close]

BLAST of Pay0015937 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-08
Identity = 61/161 (37.89%), Postives = 70/161 (43.48%), Query Frame = 0


Query: 1   MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPL--------L 60
           MGLRPEYESVRAA+LHRNP   L    +     +K L +       + L           
Sbjct: 165 MGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANET 224

Query: 61  IFDKLMRPVSARIIN----------------------------------FMAIIGSPYVV 120
           IF K  +    +  N                                  F    GS  VV
Sbjct: 225 IFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVV 284

HSP 2 Score: 270.8 bits (691), Expect = 6.9e-69
Identity = 135/156 (86.54%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           NYFLGLEISSSPSGYYLSQA YASD L+Q GITD AT STPLDPN  LTPFD VP DDPT
Sbjct: 683 NYFLGLEISSSPSGYYLSQANYASDLLSQSGITDSATFSTPLDPNGRLTPFDGVPLDDPT 742

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
           LYRQL+G+LIYLTVT PDIAYA+HIVSQFM APRTIHFT+VL ILRYIKGTLGHGLQFSS
Sbjct: 743 LYRQLVGNLIYLTVTRPDIAYAVHIVSQFMVAPRTIHFTVVLRILRYIKGTLGHGLQFSS 802

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
           QSSLVL GFS+ADWT DPTDRRSTT YCFYLGDALI
Sbjct: 803 QSSLVLSGFSNADWTGDPTDRRSTTGYCFYLGDALI 838

[Close]

BLAST of Pay0015937 vs. ExPASy TrEMBL
Match: A0A5D3DWU7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00160 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.9e-69
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           NYFLGLEISSS SGYYLSQAKYASD LN+ GITD AT STPLDPNV LTPFD VP +DPT
Sbjct: 480 NYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 539

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
           LYRQL+GSLIYLTVT PDIAYA+HIVSQFM APRTIHFT VL ILRYIKGTLGHGLQFSS
Sbjct: 540 LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSS 599

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
           QSSLVL GFSDADW  DPTDRRSTT YCFYLGDALI
Sbjct: 600 QSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI 635

[Close]

BLAST of Pay0015937 vs. NCBI nr
Match: XP_016903108.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 3.4e-94
Identity = 196/274 (71.53%), Postives = 205/274 (74.82%), Query Frame = 0


Query: 1   MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPLLIFDKLMRP 60
           MGLRPEYESVR A+LHRN                      PL  L   +  ++F++    
Sbjct: 1   MGLRPEYESVRVALLHRN----------------------PLPSLNAAVQDILFEE---- 60

Query: 61  VSARIINFMAIIGSPYVVAATPFDITTPSSLQLIDLHDLQKLVISSNSTALAVTPGSGFS 120
                               TP DITTPSSLQL DLH+L KLV S NS ALAVTPG GFS
Sbjct: 61  ------------------KTTPSDITTPSSLQLTDLHELPKLVFSFNSIALAVTPGLGFS 120

Query: 121 DVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSS 180
           DVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLN+YGITD ATSS
Sbjct: 121 DVTSDWFSLLDLISQRLRISHNYFLGLEISSSPSGYYLSQAKYASDHLNRYGITDSATSS 180

Query: 181 TPLDPNVHLTPFDDVPFDDPTLYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFT 240
           TPLDP V L PFD VPFDDPTLYRQL+GSLIYLTVTCPDIAYAIHIVSQFMTA RTIHFT
Sbjct: 181 TPLDPKVRLIPFDGVPFDDPTLYRQLVGSLIYLTVTCPDIAYAIHIVSQFMTASRTIHFT 230

Query: 241 IVLHILRYIKGTLGHGLQFSSQSSLVLFGFSDAD 275
           IVL ILRYIKGTLGHGLQF SQSSLVLFGFSDAD
Sbjct: 241 IVLRILRYIKGTLGHGLQFFSQSSLVLFGFSDAD 230

[Close]

BLAST of Pay0015937 vs. NCBI nr
Match: KAA0041166.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 8.3e-69
Identity = 136/156 (87.18%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           NYFLGLEISSS SGYYLSQAKYASD +N+ GITD AT STPLDPNV LTPFD VP +DPT
Sbjct: 644 NYFLGLEISSSSSGYYLSQAKYASDLVNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 703

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
           LYRQL+GSLIYLTVT PDIAYAIHIVSQFM APRTIHFT+VL ILRYIKGTLGHGLQFSS
Sbjct: 704 LYRQLVGSLIYLTVTRPDIAYAIHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSS 763

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
           QSSLVL GFSDADW  DPTDRRSTT YCFYLGDALI
Sbjct: 764 QSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI 799

[Close]

BLAST of Pay0015937 vs. NCBI nr
Match: KAA0041166.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 8.2e-08
Identity = 61/162 (37.65%), Postives = 70/162 (43.21%), Query Frame = 0


Query: 1   MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPL--------L 60
           MGLRPEYESVRAA+LHRNP   L    +     +K L +       + L           
Sbjct: 1   MGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANET 60

Query: 61  IFDKLMRPVSARIINFMAII-----------------------------------GSPYV 120
           IF K  +    +  N   I                                     S  V
Sbjct: 61  IFCKNCKLHGHKFANCPTIECRYCHKRGHILDTCPTRPPRPPGHSHKPKFSHKAGSSSVV 120

HSP 2 Score: 270.8 bits (691), Expect = 1.4e-68
Identity = 135/156 (86.54%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           NYFLGLEISSSPSGYYLSQA YASD L+Q GITD AT STPLDPN  LTPFD VP DDPT
Sbjct: 683 NYFLGLEISSSPSGYYLSQANYASDLLSQSGITDSATFSTPLDPNGRLTPFDGVPLDDPT 742

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
           LYRQL+G+LIYLTVT PDIAYA+HIVSQFM APRTIHFT+VL ILRYIKGTLGHGLQFSS
Sbjct: 743 LYRQLVGNLIYLTVTRPDIAYAVHIVSQFMVAPRTIHFTVVLRILRYIKGTLGHGLQFSS 802

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
           QSSLVL GFS+ADWT DPTDRRSTT YCFYLGDALI
Sbjct: 803 QSSLVLSGFSNADWTGDPTDRRSTTGYCFYLGDALI 838

[Close]

BLAST of Pay0015937 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-68
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 142  NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
            NYFLGLEISSS SGYYLSQAKYASD LN+ GITD AT STPLDPNV LTPFD VP +DPT
Sbjct: 1064 NYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 1123

Query: 202  LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
            LYRQL+GSLIYLTVT PDIAYA+HIVSQFM APRTIHFT VL ILRYIKGTLGHGLQFSS
Sbjct: 1124 LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSS 1183

Query: 262  QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
            QSSLVL GFSDADW  DPTDRRSTT YCFYLGDALI
Sbjct: 1184 QSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI 1219

[Close]

BLAST of Pay0015937 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-07
Identity = 61/161 (37.89%), Postives = 70/161 (43.48%), Query Frame = 0


Query: 1   MGLRPEYESVRAAILHRNPCLLLTLLFRISYLRKKDLALSPLCPLTLLLPL--------L 60
           MGLRPEYESVRAA+LHRNP   L    +     +K L +       + L           
Sbjct: 165 MGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANET 224

Query: 61  IFDKLMRPVSARIIN----------------------------------FMAIIGSPYVV 120
           IF K  +    +  N                                  F    GS  VV
Sbjct: 225 IFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVV 284

HSP 2 Score: 270.8 bits (691), Expect = 1.4e-68
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 142  NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
            NYFLGLEISSS SGYYLSQAKYASD LN+ GITD AT STPLDPNV LTPFD VP +DPT
Sbjct: 1032 NYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPT 1091

Query: 202  LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
            LYRQL+GSLIYLTVT PDIAYA+HIVSQFM APRTIHFT VL ILRYIKGTLGHGLQFSS
Sbjct: 1092 LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSS 1151

Query: 262  QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
            QSSLVL GFSDADW  DPTDRRSTT YCFYLGDALI
Sbjct: 1152 QSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALI 1187

[Close]

BLAST of Pay0015937 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30
Identity = 72/155 (46.45%), Postives = 97/155 (62.58%), Query Frame = 0


Query: 143 YFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPTL 202
           YFLGLEI+ S +G  + Q KYA D L++ G+     SS P+DP+V  +      F D   
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377

Query: 203 YRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSSQ 262
           YR+LIG L+YL +T  DI++A++ +SQF  APR  H   V+ IL YIKGT+G GL +SSQ
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437

Query: 263 SSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
           + + L  FSDA +      RRST  YC +LG +LI
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472

[Close]

BLAST of Pay0015937 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 0


Query: 142 NYFLGLEISSSPSGYYLSQAKYASDHLNQYGITDIATSSTPLDPNVHLTPFDDVPFDDPT 201
           +YFLG++I + PSG +LSQ KYA   LN  G+ D    STPL   ++ +      + DP+
Sbjct: 40  HYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPS 99

Query: 202 LYRQLIGSLIYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSS 261
            +R ++G+L YLT+T PDI+YA++IV Q M  P    F ++  +LRY+KGT+ HGL    
Sbjct: 100 DFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 262 QSSLVLFGFSDADWTDDPTDRRSTTDYCFYLGDALI 298
            S L +  F D+DW    + RRSTT +C +LG  +I
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNII 194

[Close]

BLAST of Pay0015937 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-14
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 211 IYLTVTCPDIAYAIHIVSQFMTAPRTIHFTIVLHILRYIKGTLGHGLQFSSQSSLVLFGF 270
           +YLT+T PD+ +A++ +SQF +A RT     V  +L Y+KGT+G GL +S+ S L L  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 271 SDADWTDDPTDRRSTTDYC 290
           +D+DW   P  RRS T +C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Pay0015937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92519	2.0e-28	42.31	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	2.4e-26	39.88	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.4e-25	38.10	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P93290	1.8e-13	45.57	Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0CV72	6.7e-13	38.54	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Pay0015937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4E9	1.6e-94	71.53	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7TGJ6	4.0e-69	87.18	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7TGJ6	4.0e-08	37.65	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DG18	5.2e-08	37.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DWU7	6.9e-69	87.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Pay0015937 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903108.1	3.4e-94	71.53	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0041166.1	8.3e-69	87.18	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0041166.1	8.2e-08	37.65	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0043149.1	1.4e-68	87.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0043149.1	1.1e-07	37.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

Pages

BLAST of Pay0015937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-30	46.45	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.4e-29	42.31	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.3e-14	45.57	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 174..291
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 174..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015937.1	Pay0015937.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding