Pay0015915 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015915
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr09: 16016683 .. 16017612 (+)
RNA-Seq Expression	Pay0015915
Synteny	Pay0015915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACTACGTCCAGAATATGAATCTGTTAGGGCTGCCTTATTACACCGCAGCCCCCTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCCAAACATTCTGAGGCTGTTCTTGCCAACACTTATTCACCACCTGGAGCATCAAACACATTTTGTAAGAATTGTAAGCTCACTGGTCATAAATTTATTAATTGTCCTAAAATAGAATGTAGGTACTGCCATAAGCCAGGTCACATCCTGGATAATTATCCCATAAAACCACCTCGACCTCAAAGCTATTCTATAAGAGCAAAGAACTTTACTAAACCCAGTAACTCCTCTGTTGCTGCTGCTGCTCTGGATAATTCCACCACCCCCTGTTTCAGATAAATGATCTTCAAAGTTTACTAAATCAGTTGATTTCATCATCTTCCTCTGCACTTGCCATTTCACCAGGTAATCGATGGCTTCTTGACTCTGGCTGTTGCAATCATATGACATCTAATTACTCTCTTATGAACATTCCTAGTCCTACTAAATCTTTACCTCCCATTTATGCTGCTGACGGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCTAGTTTGAATCTTCCTCATACTTACTGTATCCCAAACTTAACCTTTAATCTAGTATCTGTTGATCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTTCCAATGGTTGTCAGGTTCAGGATCCACAGACGGGACAGACGATTGGGACGGGACAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTTCCTCCTCCATCCATCTCTGCCCTTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTTCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTGA

mRNA sequence

ATGGGACTACGTCCAGAATATGAATCTGTTAGGGCTGCCTTATTACACCGCAGCCCCCTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCCAAACATTCTGAGGCTGTTCTTGCCAACACTTATTCACCACCTGGAGCATCAAACACATTTTGTAAGAATTGTAATCGATGGCTTCTTGACTCTGGCTGTTGCAATCATATGACATCTAATTACTCTCTTATGAACATTCCTAGTCCTACTAAATCTTTACCTCCCATTTATGCTGCTGACGGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCTAGTTTGAATCTTCCTCATACTTACTGTATCCCAAACTTAACCTTTAATCTAGTATCTGTTGATCAATTGTTCAGGATCCACAGACGGGACAGACGATTGGGACGGGACAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTTCCTCCTCCATCCATCTCTGCCCTTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTTCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTGA

Coding sequence (CDS)

ATGGGACTACGTCCAGAATATGAATCTGTTAGGGCTGCCTTATTACACCGCAGCCCCCTGCCCTCATTGGATGCTGCTATCCAAGAAATATTATTTGAAGAAAAACGTCTTGGCATCAATCTCTCCAAACATTCTGAGGCTGTTCTTGCCAACACTTATTCACCACCTGGAGCATCAAACACATTTTGTAAGAATTGTAATCGATGGCTTCTTGACTCTGGCTGTTGCAATCATATGACATCTAATTACTCTCTTATGAACATTCCTAGTCCTACTAAATCTTTACCTCCCATTTATGCTGCTGACGGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCTAGTTTGAATCTTCCTCATACTTACTGTATCCCAAACTTAACCTTTAATCTAGTATCTGTTGATCAATTGTTCAGGATCCACAGACGGGACAGACGATTGGGACGGGACAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTTCCTCCTCCATCCATCTCTGCCCTTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTTCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTGA

Protein sequence

MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASNTFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDTYQWHLRLGHASSEKLRHLISINN

Homology

[Close]

BLAST of Pay0015915 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09
Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 0


Query: 65  NCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTP----SLN 124
           N N WLLDSG  +H+TS+++ ++   P      +  ADG+ + ITH G+ + P    SL+
Sbjct: 306 NANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLD 365

Query: 125 LPHTYCIPNLTFNLVSVDQLFRIHR------------RDRRLGRDKV-----GRLFELLS 184
           L     +PN+  NL+SV +L   +R            +D   G   +       L+E   
Sbjct: 366 LNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPI 425

Query: 185 LQVPPPSISALVTDSDTY-QWHLRLGHASSEKLRHLIS 201
                 S+ A      T+  WH RLGH S   L  +IS
Sbjct: 426 ASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 463

[Close]

BLAST of Pay0015915 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 67  NRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMG--TINTPS--LNLP 126
           N WLLDSG  +H+TS+++ +++  P      +  ADG+ + I+H G  +++T S  LNL 
Sbjct: 329 NNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLH 388

Query: 127 HTYCIPNLTFNLVSVDQL--------------FRIHRRDRRL----GRDKVGRLFELLSL 186
           +   +PN+  NL+SV +L              F++   +  +    G+ K   L+E    
Sbjct: 389 NILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTK-DELYEWPIA 448

Query: 187 QVPPPSISALVTDSDTY-QWHLRLGHASSEKLRHLIS 201
              P S+ A  +   T+  WH RLGH +   L  +IS
Sbjct: 449 SSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVIS 484

[Close]

BLAST of Pay0015915 vs. ExPASy TrEMBL
Match: A0A1S3CQM0 (uncharacterized protein LOC103503195 OS=Cucumis melo OX=3656 GN=LOC103503195 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN
Sbjct: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60

Query: 61  TFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 120
           TFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLN
Sbjct: 61  TFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 120

Query: 121 LPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDT 180
           LPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDT
Sbjct: 121 LPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDT 180

Query: 181 YQWHLRLGHASSEKLRHLISINN 204
           YQWHLRLGHASSEKLRHLISINN
Sbjct: 181 YQWHLRLGHASSEKLRHLISINN 203

[Close]

BLAST of Pay0015915 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. ExPASy TrEMBL
Match: A0A5D3DT06 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00190 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. NCBI nr
Match: XP_008465564.1 (PREDICTED: uncharacterized protein LOC103503195 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 2.6e-114
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN
Sbjct: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60

Query: 61  TFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 120
           TFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLN
Sbjct: 61  TFCKNCNRWLLDSGCCNHMTSNYSLMNIPSPTKSLPPIYAADGNCMNITHMGTINTPSLN 120

Query: 121 LPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDT 180
           LPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDT
Sbjct: 121 LPHTYCIPNLTFNLVSVDQLFRIHRRDRRLGRDKVGRLFELLSLQVPPPSISALVTDSDT 180

Query: 181 YQWHLRLGHASSEKLRHLISINN 204
           YQWHLRLGHASSEKLRHLISINN
Sbjct: 181 YQWHLRLGHASSEKLRHLISINN 203

[Close]

BLAST of Pay0015915 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. NCBI nr
Match: TYK26360.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

[Close]

BLAST of Pay0015915 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 181/310 (58.39%), Postives = 191/310 (61.61%), Query Frame = 0


Query: 1   MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSEAVLANTYSPPGASN 60
           MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEE+RLGINLSKHS+AVLA+TYSPPGAS+
Sbjct: 161 MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASS 220

Query: 61  TFCKNC------------------------------------------------------ 120
           TFCKNC                                                      
Sbjct: 221 TFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAA 280

Query: 121 -------------------------------------NRWLLDSGCCNHMTSNYSLMNIP 180
                                                NRWLLDSGCCNHMTS+YSLMN P
Sbjct: 281 TVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVSPGNRWLLDSGCCNHMTSDYSLMNTP 340

Query: 181 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCIPNLTFNLVSVDQLFRI------ 204
           SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYC+PNLTFNLVSV QL  +      
Sbjct: 341 SPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGFTVSF 400

The following BLAST results are available for this feature:

BLAST of Pay0015915 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	3.1e-09	30.38	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.2e-08	29.94	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Pay0015915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQM0	1.3e-114	100.00	uncharacterized protein LOC103503195 OS=Cucumis melo OX=3656 GN=LOC103503195 PE=...	[more]
A0A5A7VIT8	1.0e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	1.0e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	1.0e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DT06	1.0e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Pay0015915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465564.1	2.6e-114	100.00	PREDICTED: uncharacterized protein LOC103503195 [Cucumis melo]	[more]
TYK19656.1	2.1e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK26360.1	2.1e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	2.1e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	2.1e-84	58.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Pay0015915 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015915.1	Pay0015915.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding