Pay0015808 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015808
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	heterogeneous nuclear ribonucleoprotein H2 isoform X1
Location	chr08: 4219655 .. 4222011 (+)
RNA-Seq Expression	Pay0015808
Synteny	Pay0015808

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGTTGAATTTGGGCGGTGGAATCGGAAGCCAAAATCGAAGTTCAGAATCAATCCTTCGTAATCTTGGTTAGGGTTTTCCTTTTCCCGCTTTCTTCTCTTCTCTTTCTCTTTGAATCCACTTCCTTAATCCTTCGCAAGCCATCCAATTTACTCCTTTTCCGTCGTTTATCAGAGTGTAGCTTTTGGAGTATCAACACAATCATGTACGGACCCAGAGGGTAAGTCCAGAATTTCTGACCTTTCTCTCTTCGCTCTTGTCTTGTTTCTTTGGAATTTTCATGGGTTGTTATTGAAATTGTGTGTTGGGATTGAGAGCAGCTGGATTGAGGGGATGAGTTCCTCTGTTTTTTGTCTTGGTGTTTCTTCTTCTTCTTATTATTCTTATTATTGCTATCAAATGGGGTTTTTTAGTAGAAAATATTCTTGAAGAACGACGTATGATTTTGTTAATGTAATTTAAATTGAGGTCCTTTTATAGTTTAATAAATAAAATGAAGGCGCGATTTATGAAACCATCCATGTGTTGCATTTTATTTACTTGATTCTCTTCTTTAGATTTTAACTTTAAAATAAACTCAATTCAGTCGGTGGTTTTTCTTCGATCGGGTAGATTTTTAGAAATCTCGAATCCTGTGGTAGGATGCGATATATCTGAGTCGTGTTAGGATTTCATTTTCCTTTTTTAAGTTTTAACCAGAAAGCAAGAATTTGAATATTGTATCGGTGTCTTATGACCTGTCTCGTTTTTTTTAATACCACTCTCAAATTTAGAAGAAGCTTTTGCAGCATTATTTAAGCTATGGAGGCCAGTGATTTAATTGGTTACTTAATGTTCTCGTGAATAGTCTTTACTTTAACATGAAGGGCTTCAATTTATACAAACATGGGGAAATCATTTTTTACTGCTTGATGGGTTGATGTTCACTGAGTCACAAAATGATTTTTCTGCTGGTACTTTTAGAAAGTCGTACTTATTCCATATCTAGTTAAATTGTTTTGTTTATAGGAGTGGTAATGGCATGTAACTTCATTGACCATAAACCGTGTACACCAATAGGTTTTAGAGGTGTAGGTTGGGCTTGGTTTTATTAACTTGCTTGAGTGGGGATTTTTCTTTTCTTTTTTCTGGGTTGGTAATTGAAGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAGTTTGCATTGCAACGTGATCGACAGAATATGGGACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAAGATTATTACAACGCTATTGCTGCAGAAGTAAATTACGAGGGCATTTATGATAATGATTACCACGGAAGCCCTCCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACCGAGATACTGAAACTTCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGTCCAGATGGGAAGGCTACTGGGGAGGCTTACGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCAAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGCTGAGTCAAGGTCAAGACAGTAAAGTAGGTAAACTTGGTTATGGAGTCTAAAAGGTTCTCTGTTGCTATATTTTTGTGCCGAGGATTTGCCGTTCTTGTACTCTTTCCAGTTTGTAGGATGACTATCGTTGTGGTATATTCTCTCTGCAGTTTTGGCTGAATCTGTGGAGTAAATCGATACTGCATTTTGAGATTGAAGTGTTAGTCCTATGAGTCCATAACTTGGTTAAAAGACTGACCTTCTTTTCCTTCTTTTTCCCATTTCACCGCATTTCTTTTTCCATTGAGGTACTCTATATGACATGAGATTAGGAATTTAGGCTACAGTTGTTGAAATTCAATTACGCAAAGTTCTGCAAAAGGGCCATACATTAATGGTGTGACAGTGGTTGACATTAATGAACAATAGCCAAAATTAAAAGCCGTCGTGAATTGTGTACTGTTGTTTATCATTTGCCA

mRNA sequence

TTGTGTTGAATTTGGGCGGTGGAATCGGAAGCCAAAATCGAAGTTCAGAATCAATCCTTCGTAATCTTGGTTAGGGTTTTCCTTTTCCCGCTTTCTTCTCTTCTCTTTCTCTTTGAATCCACTTCCTTAATCCTTCGCAAGCCATCCAATTTACTCCTTTTCCGTCGTTTATCAGAGTGTAGCTTTTGGAGTATCAACACAATCATGTACGGACCCAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAGTTTGCATTGCAACGTGATCGACAGAATATGGGACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAAGATTATTACAACGCTATTGCTGCAGAAGTAAATTACGAGGGCATTTATGATAATGATTACCACGGAAGCCCTCCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACCGAGATACTGAAACTTCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGTCCAGATGGGAAGGCTACTGGGGAGGCTTACGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCAAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGCTGAGTCAAGGTCAAGACAGTAAAGTAGGTAAACTTGGTTATGGAGTCTAAAAGGTTCTCTGTTGCTATATTTTTGTGCCGAGGATTTGCCGTTCTTGTACTCTTTCCAGTTTGTAGGATGACTATCGTTGTGGTATATTCTCTCTGCAGTTTTGGCTGAATCTGTGGAGTAAATCGATACTGCATTTTGAGATTGAAGTGTTAGTCCTATGAGTCCATAACTTGGTTAAAAGACTGACCTTCTTTTCCTTCTTTTTCCCATTTCACCGCATTTCTTTTTCCATTGAGGTACTCTATATGACATGAGATTAGGAATTTAGGCTACAGTTGTTGAAATTCAATTACGCAAAGTTCTGCAAAAGGGCCATACATTAATGGTGTGACAGTGGTTGACATTAATGAACAATAGCCAAAATTAAAAGCCGTCGTGAATTGTGTACTGTTGTTTATCATTTGCCA

Coding sequence (CDS)

ATGTACGGACCCAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAGTTTGCATTGCAACGTGATCGACAGAATATGGGACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAAGATTATTACAACGCTATTGCTGCAGAAGTAAATTACGAGGGCATTTATGATAATGATTACCACGGAAGCCCTCCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACCGAGATACTGAAACTTCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGTCCAGATGGGAAGGCTACTGGGGAGGCTTACGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCAAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGCTGAGTCAAGGTCAAGACAGTAA

Protein sequence

MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

Homology

[Close]

BLAST of Pay0015808 vs. ExPASy Swiss-Prot
Match: Q5E9J1 (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 72/202 (35.64%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 59  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFAL 118
           VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 119 QRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 178
           ++DR++MG RY+EVF+  R +    +              H  P        +       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLK-------------HSGP--------NSADTAND 131

Query: 179 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 238
             ++LRGLPF  TK  II+FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 239 KDKMTIGSRYVELFPSTPNEAR 256
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of Pay0015808 vs. ExPASy Swiss-Prot
Match: P52597 (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1 SV=3)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 71/202 (35.15%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 59  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFAL 118
           VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71

Query: 119 QRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 178
           ++DR++MG RY+EVF+  R +    +              H  P        +       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLK-------------HSGP--------NSADSAND 131

Query: 179 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 238
             ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 239 KDKMTIGSRYVELFPSTPNEAR 256
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of Pay0015808 vs. ExPASy Swiss-Prot
Match: Q60HC3 (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 71/202 (35.15%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 59  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFAL 118
           VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71

Query: 119 QRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 178
           ++DR++MG RY+EVF+  R +    +              H  P        +       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLK-------------HSGP--------NSADSAND 131

Query: 179 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 238
             ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 239 KDKMTIGSRYVELFPSTPNEAR 256
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of Pay0015808 vs. ExPASy Swiss-Prot
Match: Q9Z2X1 (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 59  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFAL 118
           VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 119 QRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 178
           ++DR++MG RY+EVF+  R +    +              H  P        +       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLK-------------HSGP--------NSADSAND 131

Query: 179 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 238
             ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 239 KDKMTIGSRYVELFPSTPNEAR 256
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of Pay0015808 vs. ExPASy Swiss-Prot
Match: Q794E4 (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 59  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFAL 118
           VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 119 QRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 178
           ++DR++MG RY+EVF+  R +    +              H  P        +       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLK-------------HSGP--------NSADSAND 131

Query: 179 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 238
             ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 239 KDKMTIGSRYVELFPSTPNEAR 256
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of Pay0015808 vs. ExPASy TrEMBL
Match: A0A1S4DTH1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485191 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG
Sbjct: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. ExPASy TrEMBL
Match: A0A0A0KJN7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509630 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG
Sbjct: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. ExPASy TrEMBL
Match: A0A6J1BYF3 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005858 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.4e-144
Identity = 256/263 (97.34%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IG
Sbjct: 181 LPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. ExPASy TrEMBL
Match: A0A6J1EFC5 (heterogeneous nuclear ribonucleoprotein H2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433681 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 7.5e-144
Identity = 257/263 (97.72%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTVGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCSDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSV KS+IIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIG
Sbjct: 181 LPFSVKKSDIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASEEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPST NEARRAESRSRQ
Sbjct: 241 SRYVELFPSTSNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. ExPASy TrEMBL
Match: A0A6J1IJJ3 (heterogeneous nuclear ribonucleoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477672 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.2e-143
Identity = 255/263 (96.96%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYKVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVF CKRQDYYNA+AAEVNYEGIY+NDY+GSPPPRQKR SDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFSCKRQDYYNAVAAEVNYEGIYNNDYNGSPPPRQKRISDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNIIEFFGEFDLAE+RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG
Sbjct: 181 LPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. NCBI nr
Match: XP_008440908.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo] >XP_016899253.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 3.0e-147
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG
Sbjct: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. NCBI nr
Match: XP_004134826.1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus] >XP_011658072.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus] >KGN48994.1 hypothetical protein Csa_003171 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 3.9e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG
Sbjct: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. NCBI nr
Match: XP_038882740.1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida])

HSP 1 Score: 530.4 bits (1365), Expect = 8.8e-147
Identity = 261/263 (99.24%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNA+A+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG
Sbjct: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. NCBI nr
Match: XP_022133202.1 (heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia] >XP_022133203.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia])

HSP 1 Score: 520.4 bits (1339), Expect = 9.1e-144
Identity = 256/263 (97.34%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVV
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+QVEFALQRDRQNM
Sbjct: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 121 GRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSVTKSNI EFFGEFDL EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IG
Sbjct: 181 LPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIG 240

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPSTPNEARRAESRSRQ
Sbjct: 241 SRYVELFPSTPNEARRAESRSRQ 263

[Close]

BLAST of Pay0015808 vs. NCBI nr
Match: KAG6594733.1 (hypothetical protein SDJN03_11286, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 519.6 bits (1337), Expect = 1.6e-143
Identity = 257/263 (97.72%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQPYGYGSFPPTHAFPVV
Sbjct: 346 MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTVGFQPYGYGSFPPTHAFPVV 405

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM
Sbjct: 406 RLRGLPFNCSDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 465

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 180
           GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG
Sbjct: 466 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRG 525

Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
           LPFSV KS+IIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIG
Sbjct: 526 LPFSVKKSDIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASEEEAKRAMSKDKMTIG 585

Query: 241 SRYVELFPSTPNEARRAESRSRQ 264
           SRYVELFPST NEARRAESRSRQ
Sbjct: 586 SRYVELFPSTSNEARRAESRSRQ 608

[Close]

BLAST of Pay0015808 vs. TAIR 10
Match: AT5G66010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 355.5 bits (911), Expect = 3.6e-98
Identity = 180/267 (67.42%), Postives = 211/267 (79.03%), Query Frame = 0


Query: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVV 60
           MYG RGAM GSG    GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVV
Sbjct: 1   MYGSRGAMFGSG----GYEVGSKRQRMMQSNPYLAVGTGPTSFPPFGYAG-----GFPVV 60

Query: 61  RLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM 120
           RLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFAG +QVE ALQRDR NM
Sbjct: 61  RLRGLPFNCADIDIFEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNM 120

Query: 121 GRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEIL 180
           GRRYVEVFRC +QDYYNA+AAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+L
Sbjct: 121 GRRYVEVFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAKRFSEKEKLEYTEVL 180

Query: 181 KLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDK 240
           K+RGLP+SV K  IIEFF  + + + R+ +  RPDGKATGEA+VEF + EEA+RAM+KDK
Sbjct: 181 KMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDK 240

Query: 241 MTIGSRYVELFPSTPNEARRAESRSRQ 264
           M+IGSRYVELFP+T  EARRAE+RSRQ
Sbjct: 241 MSIGSRYVELFPTTREEARRAEARSRQ 255

[Close]

BLAST of Pay0015808 vs. TAIR 10
Match: AT3G20890.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62
Identity = 132/288 (45.83%), Postives = 181/288 (62.85%), Query Frame = 0


Query: 10  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGL 69
           G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP   FP VRLRGL
Sbjct: 5   GYGDGPDGREMGPKRQRMIDQGPPGPFYGPHPSSGFMYNPYGFVAPPPPPPFPAVRLRGL 64

Query: 70  PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 129
           PF+C ++D+ +FF GLD+VDVL V++N +  GEAF V    +QV+FALQ++RQNMGRRYV
Sbjct: 65  PFDCAELDVVEFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 124

Query: 130 EVFRCKRQDYYNAIAAEVNYEGIY--------------------------DNDYHGSPPP 189
           EVFR  +Q+YY AIA EV    ++                               GS P 
Sbjct: 125 EVFRSTKQEYYKAIANEVAESRVHGMASGGGGGLGGGNGSGGGGGGGGGGGRISGGSSPR 184

Query: 190 R---QKRFSD--KDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKA 249
           R   + R SD  K+ +E+T IL+LRGLPFS  K +I++FF +F+L+ED +H+    +G+ 
Sbjct: 185 RHVQRARSSDDGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRP 244

Query: 250 TGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR 263
           TGEA+VEF +AE+++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Sbjct: 245 TGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 292

[Close]

BLAST of Pay0015808 vs. TAIR 10
Match: AT5G66010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-55
Identity = 106/161 (65.84%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 107 VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPP----RQK 166
           +QVE ALQRDR NMGRRYVEVFRC +QDYYNA+AAE   EG Y+ +   SPPP    R K
Sbjct: 1   MQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAK 60

Query: 167 RFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEF 226
           RFS+K+++EYTE+LK+RGLP+SV K  IIEFF  + + + R+ +  RPDGKATGEA+VEF
Sbjct: 61  RFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEF 120

Query: 227 ASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ 264
            + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Sbjct: 121 ETGEEARRAMAKDKMSIGSRYVELFPTTREEARRAEARSRQ 158

[Close]

BLAST of Pay0015808 vs. TAIR 10
Match: AT4G36960.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 28/85 (32.94%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 176 LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKD 235
           L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K 
Sbjct: 5   LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL-KG 64

Query: 236 KMTIGSRYVELFPSTPNEARRAESR 261
           +  +G+R +E+  +TP E  R  ++
Sbjct: 65  EHFLGNRILEVKVATPKEEMRQPAK 88

[Close]

BLAST of Pay0015808 vs. TAIR 10
Match: AT4G36960.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 28/85 (32.94%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 176 LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKD 235
           L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K 
Sbjct: 5   LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL-KG 64

Query: 236 KMTIGSRYVELFPSTPNEARRAESR 261
           +  +G+R +E+  +TP E  R  ++
Sbjct: 65  EHFLGNRILEVKVATPKEEMRQPAK 88

The following BLAST results are available for this feature:

BLAST of Pay0015808 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5E9J1	2.7e-26	35.64	Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 S...	[more]
P52597	3.6e-26	35.15	Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1...	[more]
Q60HC3	3.6e-26	35.15	Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRN...	[more]
Q9Z2X1	3.6e-26	35.15	Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=...	[more]
Q794E4	3.6e-26	35.15	Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnp...	[more]

BLAST of Pay0015808 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTH1	1.5e-147	100.00	heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KJN7	1.9e-147	99.62	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509630 PE=4 SV...	[more]
A0A6J1BYF3	4.4e-144	97.34	heterogeneous nuclear ribonucleoprotein H2 isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1EFC5	7.5e-144	97.72	heterogeneous nuclear ribonucleoprotein H2-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1IJJ3	2.2e-143	96.96	heterogeneous nuclear ribonucleoprotein H-like isoform X1 OS=Cucurbita maxima OX...	[more]

BLAST of Pay0015808 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440908.1	3.0e-147	100.00	PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo] ...	[more]
XP_004134826.1	3.9e-147	99.62	heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus] >XP_0116...	[more]
XP_038882740.1	8.8e-147	99.24	heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]	[more]
XP_022133202.1	9.1e-144	97.34	heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia] >XP_...	[more]
KAG6594733.1	1.6e-143	97.72	hypothetical protein SDJN03_11286, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0015808 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66010.1	3.6e-98	67.42	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G20890.1	3.2e-62	45.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G66010.2	1.7e-55	65.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.1	1.1e-06	32.94	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.2	1.1e-06	32.94	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 175..247 e-value: 1.0E-8 score: 45.0 coord: 59..128 e-value: 1.3E-5 score: 34.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 61..123 e-value: 1.7E-6 score: 27.7 coord: 178..244 e-value: 2.4E-8 score: 33.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 174..251 score: 10.274912
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 159..263 e-value: 2.2E-29 score: 103.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 56..141 e-value: 3.3E-23 score: 83.6
None	No IPR available	PANTHER	PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	coord: 1..263
None	No IPR available	PANTHER	PTHR13976:SF71	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..263
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 175..247 e-value: 7.64272E-29 score: 102.635
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 173..260
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 52..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015808.3	Pay0015808.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding