Pay0015556 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCACTTAGCTCCAATGGCTTCTCCAAGCAATAATCTTCTTAAACCGGTGGTCGTGGTCACCTTCGCCATCGTACTTTCCCTCTTGCTCTCTCTTACCACATTATCAGGTAAATCAACAAAAGCAAAAGCAATAGCAAACCCTTTAGCCAAATTTTCTTTCTTTTTTCTTTTTTTTCTTCTTTTTTATGCTCAAAACATAATGTGCACAGCCACAAAAATTGAGTAACTTTTGTGTTTATGTGTTCAGCTGTGGCTGAGGTTGAGAGTAGTTTGCAAAAGAGGACGGTGCTGGGATCGAAGCCACCAAGATGCGTCGGGAAGTGTTTGAATTGTAGGCCTTGCACGGCGGCGTTGGTGGTGCCGGAGCACCTTGAACGGAAGAGATTTGAAAGAAATTTGGATCGTAGAGAAGAAGATGACAGCTATTATCTTCTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGAGAGAATAATATATGATGATGCTGTTCTTCTTTTCTTTTCTTTTCTTTTTTTCCTTCCCATCATGGTGTTGGTTTATGTACAAAATTGAACTTGATTTAGC CTCACTTAGCTCCAATGGCTTCTCCAAGCAATAATCTTCTTAAACCGGTGGTCGTGGTCACCTTCGCCATCGTACTTTCCCTCTTGCTCTCTCTTACCACATTATCAGCTGTGGCTGAGGTTGAGAGTAGTTTGCAAAAGAGGACGGTGCTGGGATCGAAGCCACCAAGATGCGTCGGGAAGTGTTTGAATTGTAGGCCTTGCACGGCGGCGTTGGTGGTGCCGGAGCACCTTGAACGGAAGAGATTTGAAAGAAATTTGGATCGTAGAGAAGAAGATGACAGCTATTATCTTCTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGAGAGAATAATATATGATGATGCTGTTCTTCTTTTCTTTTCTTTTCTTTTTTTCCTTCCCATCATGGTGTTGGTTTATGTACAAAATTGAACTTGATTTAGC ATGGCTTCTCCAAGCAATAATCTTCTTAAACCGGTGGTCGTGGTCACCTTCGCCATCGTACTTTCCCTCTTGCTCTCTCTTACCACATTATCAGCTGTGGCTGAGGTTGAGAGTAGTTTGCAAAAGAGGACGGTGCTGGGATCGAAGCCACCAAGATGCGTCGGGAAGTGTTTGAATTGTAGGCCTTGCACGGCGGCGTTGGTGGTGCCGGAGCACCTTGAACGGAAGAGATTTGAAAGAAATTTGGATCGTAGAGAAGAAGATGACAGCTATTATCTTCTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGA MASPSNNLLKPVVVVTFAIVLSLLLSLTTLSAVAEVESSLQKRTVLGSKPPRCVGKCLNCRPCTAALVVPEHLERKRFERNLDRREEDDSYYLLHWKCKCGNKLYQP Homology
BLAST of Pay0015556 vs. ExPASy Swiss-Prot
Match: Q1G3V9 (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EPFL8 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.3e-06 Identity = 29/92 (31.52%), Postives = 48/92 (52.17%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.4e-05 Identity = 26/62 (41.94%), Postives = 28/62 (45.16%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04 Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04 Identity = 23/65 (35.38%), Postives = 27/65 (41.54%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.7e-04 Identity = 25/61 (40.98%), Postives = 30/61 (49.18%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy TrEMBL
Match: A0A5D3E1Z8 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001760 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 2.7e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy TrEMBL
Match: A0A1S3BZD4 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103494701 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 2.7e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy TrEMBL
Match: A0A0A0KWT7 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G005010 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.8e-43 Identity = 93/107 (86.92%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy TrEMBL
Match: A0A6J1GAL3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452285 PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.3e-33 Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Pay0015556 vs. ExPASy TrEMBL
Match: A0A6J1K9T3 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492958 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.7e-33 Identity = 81/108 (75.00%), Postives = 86/108 (79.63%), Query Frame = 0
BLAST of Pay0015556 vs. NCBI nr
Match: XP_008454238.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucumis melo] >KAA0044443.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucumis melo var. makuwa] >TYK29570.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 214.2 bits (544), Expect = 5.7e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Pay0015556 vs. NCBI nr
Match: XP_004152199.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucumis sativus] >KGN52892.1 hypothetical protein Csa_015347 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 1.8e-42 Identity = 93/107 (86.92%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Pay0015556 vs. NCBI nr
Match: XP_038876854.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Benincasa hispida]) HSP 1 Score: 158.3 bits (399), Expect = 3.7e-35 Identity = 82/107 (76.64%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of Pay0015556 vs. NCBI nr
Match: XP_023525861.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.5 bits (384), Expect = 2.0e-33 Identity = 81/108 (75.00%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Pay0015556 vs. NCBI nr
Match: XP_022948690.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata]) HSP 1 Score: 152.1 bits (383), Expect = 2.6e-33 Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Pay0015556 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07 Identity = 29/92 (31.52%), Postives = 48/92 (52.17%), Query Frame = 0
BLAST of Pay0015556 vs. TAIR 10
Match: AT2G30370.1 (allergen-related ) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 26/62 (41.94%), Postives = 28/62 (45.16%), Query Frame = 0
BLAST of Pay0015556 vs. TAIR 10
Match: AT2G30370.2 (allergen-related ) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 26/62 (41.94%), Postives = 28/62 (45.16%), Query Frame = 0
BLAST of Pay0015556 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of Pay0015556 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05 Identity = 25/61 (40.98%), Postives = 30/61 (49.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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