Pay0015487 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015487
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr05: 9609142 .. 9613175 (-)
RNA-Seq Expression	Pay0015487
Synteny	Pay0015487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTGGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATTCTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCCTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTCTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCCGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

mRNA sequence

ATGGCTTCTACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTGGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGGTGTACTTTTCATATGACCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATTCTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCCTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTCTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCCGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Coding sequence (CDS)

ATGGCTTCTACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTTGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTCGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTGGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAAGTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTATGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGGTGTACTTTTCATATGACCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATTCTTACTAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCCCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACACTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACAACCAAAGGTATTTTGGATTATGTTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCCTTTGGAAAATTCCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGGGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTCCAGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAGCATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGATTAAAACAATCCCCAAGACAGTGGTACATCAGGTTTGATACTTTCATTCTAAAGCAGGGATTCCACAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGAATTCTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTGGTAGCAAGGCAGTCTCAACACCCTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCCGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Protein sequence

MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVYFSYDPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG

Homology

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BLAST of Pay0015487 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 1.2e-292
Identity = 559/1344 (41.59%), Postives = 820/1344 (61.01%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILD-EERLPDNITESEKRDMDEMAY 60
            M+  ++EV+KFNG   F+ W++++R +L+Q  + K+LD + + PD +   +  D+DE A 
Sbjct: 1    MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 61   STILLYLSDEVL-RLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLE 120
            S I L+LSD+V+  ++DE T  G +W +LESLY++K+L NK+Y+K++ +   M +  +  
Sbjct: 61   SAIRLHLSDDVVNNIIDEDTARG-IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 120

Query: 121  ENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDAL 180
             +L+ F  ++  L N+G K+ +E++A++LLNSLP +Y  +   I +G+ ++ +  V  AL
Sbjct: 121  SHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 180

Query: 181  KTRNLEIKKERKDGELLM--ARGRSEKKSWKGKERS-----FRSKSKGKSRKCFLCHKEG 240
                   KK    G+ L+   RGRS ++S     RS      +++SK + R C+ C++ G
Sbjct: 181  LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 240

Query: 241  HFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAE------------TGYESAEVLM 300
            HFK++CP  +  +  TS     D  N+A +    D+              +G ES  V+ 
Sbjct: 241  HFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVD 300

Query: 301  VVYFSY-DPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 360
                 +  P RD    +   D G V +G+     + G G + I T+ G   +L +VR+VP
Sbjct: 301  TAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVP 360

Query: 361  KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 420
             L+ NLIS   LDR G      N   ++TKGSLV  +G  R  LY        G    A 
Sbjct: 361  DLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQ 420

Query: 421  GKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH 480
             +++    LWHKR+ H+SE+GLQ L+++ L+   K   +  C++C+ GK  RV F     
Sbjct: 421  DEIS--VDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSE 480

Query: 481  TTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQ 540
                ILD V+SD+ GP +  SMGG++YF++ IDD SRK+W+Y LK KD+ F  F ++   
Sbjct: 481  RKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHAL 540

Query: 541  VENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMER 600
            VE +TGRK+K LR+DNG E+ + +F ++C S GI    TV  TPQ NG+AER NRTI+E+
Sbjct: 541  VERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEK 600

Query: 601  TRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTA 660
             R +L  A LP  FWGEA QTACYLINRSPS  L  + P+ VWT K  S  HL+VFGC A
Sbjct: 601  VRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 660

Query: 661  YAHV---KDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCV 720
            +AHV   +  KL+ +++ C+FIGY     GY+LW  +    K I SRDV F E+E+    
Sbjct: 661  FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLW--DPVKKKVIRSRDVVFRESEVRTAA 720

Query: 721  KEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE 780
               +K + G  +   V I S        ++    VSE     Q E  G   +Q   L DE
Sbjct: 721  DMSEKVKNG-IIPNFVTIPSTSNNPTSAESTTDEVSE-----QGEQPGEVIEQGEQL-DE 780

Query: 781  GAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEA 840
            G    E  +  + Q+  L R   +R R    RY   + V         S + EP + +E 
Sbjct: 781  GVEEVEHPTQGEEQHQPLRRS--ERPRVESRRYPSTEYVLI-------SDDREPESLKEV 840

Query: 841  IVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA 900
            +    K Q   AM+EE+ SL KN T+ LV  P  ++ ++ KW++K+K   G     RYKA
Sbjct: 841  LSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK-DGDCKLVRYKA 900

Query: 901  RLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVI 960
            RLV KG+ QK+G+DF EIFSPVV+ +SIR ILS+A   D+ +EQ+DV TAFLHG+LEE I
Sbjct: 901  RLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEI 960

Query: 961  YMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQ 1020
            YM QP+G+EV GK+ MVC+L+KSLYGLKQ+PRQWY++FD+F+  Q + +   D CVY+K+
Sbjct: 961  YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 1020

Query: 1021 SQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKG 1080
              +  +I LLLYVDDM++V KD   I +LK  LS  F+MKDLG  ++ILGM + R+R   
Sbjct: 1021 FSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSR 1080

Query: 1081 LLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVG 1140
             L +SQE Y+ ++LE++NM  +K VSTPLA H +LS   CP T +E+  M+ +PY +AVG
Sbjct: 1081 KLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVG 1140

Query: 1141 SIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKST 1200
            S+MY M+CTRPD+ +A+ ++SRF+ NPGKEHW+AVKW+LRYL+G+    LC+        
Sbjct: 1141 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG---GSDP 1200

Query: 1201 LLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKE 1260
            +L+G+TDAD A D+D R+S +G++F   G  +SW+  LQ  VALSTTE+EYI+  E  KE
Sbjct: 1201 ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKE 1260

Query: 1261 AVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVE 1320
             +WLKR + EL   +   +++CDSQSAI L+KN  +H R+KHIDV++H+IR ++  + ++
Sbjct: 1261 MIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLK 1317

[Close]

BLAST of Pay0015487 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 634.0 bits (1634), Expect = 3.7e-180
Identity = 444/1437 (30.90%), Postives = 735/1437 (51.15%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            M   +  +  F+G   +A+W+ +IRA+L +  V K++D   +P+ + +S K+  +  A S
Sbjct: 1    MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVD-GLMPNEVDDSWKK-AERCAKS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TI+ YLSD  L       T  ++ + L+++Y  KSL +++ ++++    K+    SL  +
Sbjct: 61   TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGRDSLTMSIVLDALK 180
               F +++ +L   G K+ + ++   LL +LP  Y  +  AI+    ++LT++ V + L 
Sbjct: 121  FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 180

Query: 181  TRNLEIKKERKD--GELLMARGRSEKKSWKG---KERSFRSKS--KGKSR---KCFLCHK 240
             + ++IK +  D   +++ A   +   ++K    K R  + K   KG S+   KC  C +
Sbjct: 181  DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGR 240

Query: 241  EGHFKKNC-----PLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVYFS 300
            EGH KK+C      LN   + +  +      +  A +    ++         VL      
Sbjct: 241  EGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVL------ 300

Query: 301  YDPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRI-------LTNVRYV 360
                 D L N + +    V +       V   G    AT  G+VR+       L +V + 
Sbjct: 301  DSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFC 360

Query: 361  PKLKRNLISLGELDRSGCTIKSENGVMKVTKGSL--VKLRGTLRHGLYVLEGTTVSGSAA 420
             +   NL+S+  L  +G +I+ +   + ++K  L  VK  G L +         ++  A 
Sbjct: 361  KEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNN------VPVINFQAY 420

Query: 421  IASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNVEL--PFCEHCIMGKSTR 480
              + K  +   LWH+R  H+S+  L  + ++ +      + N+EL    CE C+ GK  R
Sbjct: 421  SINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQAR 480

Query: 481  VKFGKGKHTT--KGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEA 540
            + F + K  T  K  L  VHSD+ GP   V++    YF+  +D F+     Y +K K + 
Sbjct: 481  LPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDV 540

Query: 541  FGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLA 600
            F  F ++  + E     KV YL  DNG E+++N+  QFC  +GI+ H TV +TPQ NG++
Sbjct: 541  FSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVS 600

Query: 601  ERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL--NLKTPQEVWTGKAP 660
            ER  RTI E+ R +++ A L   FWGEA  TA YLINR PS AL  + KTP E+W  K P
Sbjct: 601  ERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKP 660

Query: 661  SLEHLRVFGCTAYAHVKD--GKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDV 720
             L+HLRVFG T Y H+K+  GK + ++ K +F+GY     G+KLW  +    K I++RDV
Sbjct: 661  YLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKLW--DAVNEKFIVARDV 720

Query: 721  TFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVRP--SIDLDNQPPLVSEI 780
              +ET M            +K+ ++ +  +      +I     P  S + DN    +  +
Sbjct: 721  VVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDN----IQFL 780

Query: 781  EDTQQSEFDGIQSQQERIL----------IDEGAFIEESSSNNDL--------------- 840
            +D+++SE     +   +I+           D   F+++S  +N                 
Sbjct: 781  KDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLN 840

Query: 841  -------------------------------QNYQLTRDRVQRERHAP-IRYGYADLVAY 900
                                              ++   R +R +  P I Y   D    
Sbjct: 841  ESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLN 900

Query: 901  ALTCAADSIEAE-PLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQS 960
             +   A +I  + P +F+E    D K  W++A+  EL +   N TW++  +P N+ ++ S
Sbjct: 901  KVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDS 960

Query: 961  KWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDM 1020
            +W++ +K    GN   RYKARLVA+G+TQK  +D+ E F+PV R SS R ILS+ + +++
Sbjct: 961  RWVFSVKYNELGN-PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNL 1020

Query: 1021 FIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDT 1080
             + QMDV TAFL+G L+E IYM  P+G  +    D VC+L+K++YGLKQ+ R W+  F+ 
Sbjct: 1021 KVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQ 1080

Query: 1081 FILKQGFHRNSYDACVY-WKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEM 1140
             + +  F  +S D C+Y   +      IY+LLYVDD+++ + D   +   K+ L  +F M
Sbjct: 1081 ALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRM 1140

Query: 1141 KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSGSKAVSTPLAS--HFRLSS 1200
             DL E+K  +G+ ++   +K  + +SQ +YV K+L K+NM    AVSTPL S  ++ L +
Sbjct: 1141 TDLNEIKHFIGIRIEMQEDK--IYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLN 1200

Query: 1201 SQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKW 1260
            S          E  N P  + +G +MY+M+CTRPDL  A++++SR+ S    E W+ +K 
Sbjct: 1201 SD---------EDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKR 1260

Query: 1261 VLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYG-NVVSWKV 1320
            VLRYLKG+  + L + ++      + G+ D+D+A     R+S +G++F+++  N++ W  
Sbjct: 1261 VLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNT 1320

Query: 1321 NLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPI-IHCDSQSAIHLAKNPS 1328
              Q  VA S+TE+EY++L EAV+EA+WLK ++  +  +   PI I+ D+Q  I +A NPS
Sbjct: 1321 KRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPS 1380

[Close]

BLAST of Pay0015487 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 9.3e-139
Identity = 421/1458 (28.88%), Postives = 670/1458 (45.95%), Query Frame = 0


Query: 16   DFALWRKKIRAILVQHKVAKILD-----------EERLPD-NITESEKRDMDEMAYSTIL 75
            ++ +W +++ A+   +++A  LD            + +P  N   +  R  D++ YS IL
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIK-------EKFFGYKMDQSKS 135
              +S  V   V  ATT  ++W+ L  +Y   S  +   ++           G  MD  + 
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQLALLGKPMDHDEQ 149

Query: 136  LE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSLPETYREVKAAIK 195
            +E   ENL +  K V+D          L  I E++ +    ++ LNS       + A + 
Sbjct: 150  VERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVV--PITANVV 209

Query: 196  YGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRK 255
              R++ T          RN   + + ++      R  S + S  G  RS   + K    +
Sbjct: 210  THRNTNT---------NRNQNNRGDNRNYNNNNNRSNSWQPSSSG-SRSDNRQPKPYLGR 269

Query: 256  CFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVYF 315
            C +C  +GH  K CP     +++T++   T  +   +      +  + Y +   L+    
Sbjct: 270  CQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANL-AVNSPYNANNWLLDSGA 329

Query: 316  SYDPHRDF--LTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKL 375
            ++    DF  L+  Q   GG  V++ D  T  +  TGS  + T    +  L  V YVP +
Sbjct: 330  THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYVPNI 389

Query: 376  KRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLY---VLEGTTVSGSA 435
             +NLIS+  L   +R        +  +K     +  L+G  +  LY   +     VS  A
Sbjct: 390  HKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFA 449

Query: 436  AIASGKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCEHCIMGKSTRVKF 495
            +  S K T  S  WH RL H S   L + +S   L     + +L  C  C + KS +V F
Sbjct: 450  SPCS-KATHSS--WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF 509

Query: 496  GKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFL 555
                 T+   L+Y++SD+W  +  +S+   RY++  +D F+R  W+YPLKQK +    F+
Sbjct: 510  SNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFI 569

Query: 556  EWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNR 615
             +K  VEN+   ++  L +DNG EFV      +    GI+   +  +TP+ NGL+ER +R
Sbjct: 570  IFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHR 629

Query: 616  TIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRV 675
             I+E    LL++AS+P  +W  A   A YLINR P+  L L++P +   G+ P+ E L+V
Sbjct: 630  HIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKV 689

Query: 676  FGCTAYAHVKD---GKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETE 735
            FGC  Y  ++     KL  ++ +C F+GY      Y   C+     +   SR V F+E  
Sbjct: 690  FGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAY--LCLHIPTGRLYTSRHVQFDERC 749

Query: 736  MPYC-----VKEQQKQQT-------------------------GDHVVTEVRIASEVRP- 795
             P+      V   Q+Q++                         G H+ T  R  S   P 
Sbjct: 750  FPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPL 809

Query: 796  ---------------SIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSS 855
                           S    ++P   S       ++    Q+      I         S 
Sbjct: 810  CTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSP 869

Query: 856  NNDLQNYQLTRDR--------------------------------------VQRERHAPI 915
            N+  QN  L +                                        +Q    AP+
Sbjct: 870  NSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPV 929

Query: 916  R-YGYA-----------DLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFS 975
              +  A              +YA + AA+S   EP T  +A+  D   +W+ AM  E+ +
Sbjct: 930  NTHSMATRAKDGIRKPNQKYSYATSLAANS---EPRTAIQAMKDD---RWRQAMGSEINA 989

Query: 976  LHKNQTWSLV-PKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEI 1035
               N TW LV P PP+  ++  +WI+  K  + G S  RYKARLVAKGY Q+ G+D+ E 
Sbjct: 990  QIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRPGLDYAET 1049

Query: 1036 FSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVC 1095
            FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+QP G+  K + D VC
Sbjct: 1050 FSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVC 1109

Query: 1096 RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMIL 1155
            RL K++YGLKQ+PR WY+   T++L  GF  +  D  ++  Q  + + IY+L+YVDD+++
Sbjct: 1110 RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR-SIIYMLVYVDDILI 1169

Query: 1156 VSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYN 1215
               D   +      LS  F +K+  +L   LG++ KR  +   L +SQ  Y + LL + N
Sbjct: 1170 TGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQRRYTLDLLARTN 1229

Query: 1216 MSGSKAVSTPLASHFRL---SSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGY 1275
            M  +K V+TP+A+  +L   S ++ P   +         Y   VGS+ YL   TRPDL Y
Sbjct: 1230 MLTAKPVATPMATSPKLTLHSGTKLPDPTE---------YRGIVGSLQYLAF-TRPDLSY 1289

Query: 1276 AMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLD 1328
            A++ +S++M  P  +HW A+K VLRYL G+    +   +    +  L  ++DAD+A D D
Sbjct: 1290 AVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK--GNTLSLHAYSDADWAGDTD 1349

[Close]

BLAST of Pay0015487 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 4.3e-136
Identity = 411/1461 (28.13%), Postives = 679/1461 (46.48%), Query Frame = 0


Query: 16   DFALWRKKIRAILVQHKVAKILD-EERLPD-----------NITESEKRDMDEMAYSTIL 75
            ++ +W +++ A+   +++A  LD    +P            N   +  +  D++ YS +L
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDE 135
              +S  V   V  ATT  ++W+ L  +Y   S  +   ++ +   +    +K++++ +  
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-TKTIDDYMQG 149

Query: 136  FQKIVVDLNNIGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT----------- 195
                   L  +G+ M  + Q   +L +LPE Y+ V  + A K    +LT           
Sbjct: 150  LVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHES 209

Query: 196  ----------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSWKGKERSF--- 255
                      + I  +A+  RN        +G            +  K W+    +F   
Sbjct: 210  KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN 269

Query: 256  RSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYE 315
             ++SK    KC +C  +GH  K C   +   +S +       +   +      +  + Y 
Sbjct: 270  NNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANL-ALGSPYS 329

Query: 316  SAEVLMVVYFSYDPHRDF--LTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRI 375
            S   L+    ++    DF  L+  Q   GG  V++ D  T  +  TGS  ++T    +  
Sbjct: 330  SNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLN- 389

Query: 376  LTNVRYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLRGTLRHGLY---V 435
            L N+ YVP + +NLIS+  L + +G +++    +  +K     +  L+G  +  LY   +
Sbjct: 390  LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPI 449

Query: 436  LEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPF--CEH 495
                 VS  A+  S K T  S  WH RL H +   L ++     L  V N    F  C  
Sbjct: 450  ASSQPVSLFAS-PSSKATHSS--WHARLGHPAPSILNSVISNYSL-SVLNPSHKFLSCSD 509

Query: 496  CIMGKSTRVKFGKGKHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPL 555
            C++ KS +V F +    +   L+Y++SD+W  +  +S    RY++  +D F+R  W+YPL
Sbjct: 510  CLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPL 569

Query: 556  KQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTP 615
            KQK +    F+ +K  +EN+   ++    +DNG EFV     ++    GI+   +  +TP
Sbjct: 570  KQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTP 629

Query: 616  QQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWT 675
            + NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+  L L++P +   
Sbjct: 630  EHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLF 689

Query: 676  GKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCI 735
            G +P+ + LRVFGC  Y  ++     KL+ ++ +C+F+GY      Y   C+    ++  
Sbjct: 690  GTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAY--LCLHLQTSRLY 749

Query: 736  ISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR---------------I 795
            ISR V F+E   P+         V+EQ+++ +     H     R                
Sbjct: 750  ISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAA 809

Query: 796  ASEVRPSIDLDNQPPLVSEIEDTQQSEF-----------DGIQSQQERILIDEGAFIEES 855
                 PS    N     S ++ +  S F           +G Q   +           ++
Sbjct: 810  TPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQN 869

Query: 856  SSNNDLQN---YQLTRDR----------------------------------------VQ 915
            +S N+  N    QL +                                          V 
Sbjct: 870  TSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVN 929

Query: 916  RERHAPIR------YGYADLV----AYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAME 975
                AP+          A ++     Y+L  +  + E+EP T   AI +   ++W++AM 
Sbjct: 930  NNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL-AAESEPRT---AIQALKDERWRNAMG 989

Query: 976  EELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGV 1035
             E+ +   N TW LVP PP+   ++  +WI+  K  + G S  RYKARLVAKGY Q+ G+
Sbjct: 990  SEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKARLVAKGYNQRPGL 1049

Query: 1036 DFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGK 1095
            D+ E FSPV++ +SIR++L +AV     I Q+DV  AFL G L + +YM+QP G+  K +
Sbjct: 1050 DYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDR 1109

Query: 1096 EDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYV 1155
             + VC+L K+LYGLKQ+PR WY+    ++L  GF  +  D  ++  Q  K + +Y+L+YV
Sbjct: 1110 PNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGK-SIVYMLVYV 1169

Query: 1156 DDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKL 1215
            DD+++   D   +      LS  F +KD  EL   LG++ KR      L +SQ  Y++ L
Sbjct: 1170 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRRYILDL 1229

Query: 1216 LEKYNMSGSKAVSTPLASHFRLS-SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPD 1275
            L + NM  +K V+TP+A   +LS  S   +T           Y   VGS+ YL   TRPD
Sbjct: 1230 LARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE-------YRGIVGSLQYLAF-TRPD 1289

Query: 1276 LGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAA 1328
            + YA++ +S+FM  P +EH +A+K +LRYL G+ +  +   +    +  L  ++DAD+A 
Sbjct: 1290 ISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK--GNTLSLHAYSDADWAG 1349

[Close]

BLAST of Pay0015487 vs. ExPASy Swiss-Prot
Match: P25384 (Transposon Ty2-C Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-C PE=3 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 3.8e-39
Identity = 263/1288 (20.42%), Postives = 491/1288 (38.12%), Query Frame = 0


Query: 336  YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAA 395
            + P +  +L+SL EL     T       ++ + G++  L   ++HG +          + 
Sbjct: 514  HTPNIAYDLLSLSELANQNITACFTRNTLERSDGTV--LAPIVKHGDFYWLSKKYLIPSH 573

Query: 396  IASGKVTDMSM----------LWHKRLAHVSERGLQALSQQGLLGGVKNVELPF------ 455
            I+   + +++           L H+ L H + R +Q   ++  +  +K  ++ +      
Sbjct: 574  ISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTY 633

Query: 456  -CEHCIMGKSTRVKFGKGK----HTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFS 515
             C  C++GKST+ +  KG       +     Y+H+D++GP   +      YFIS  D+ +
Sbjct: 634  QCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKT 693

Query: 516  RKVWIYPL--KQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGI 575
            R  W+YPL  ++++     F      ++NQ   +V  ++ D G E+ N   ++F  + GI
Sbjct: 694  RFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGI 753

Query: 576  TRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL 635
            T  +T T   + +G+AER NRT++   R LL  + LP   W  A + +  +I  S  +  
Sbjct: 754  TACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFST-IIRNSLVSPK 813

Query: 636  NLKTPQEVWTGKAPSLEHLRVFGCTAYA--HVKDGKLNKRALKCMFIGYPQGVKGYKLW- 695
            N K+ ++        +  +  FG       H  D K++ R +    +   +   GY ++ 
Sbjct: 814  NDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYL 873

Query: 696  -CIEKGMN--KCIISRD------------VTF-----------------NETEMPYCVKE 755
              ++K ++    +I +D            +TF                 NETE  Y    
Sbjct: 874  PSLKKTVDTTNYVILQDKQSKLDQFNYDTLTFDDDLNRLTAHNQSFIEQNETEQSY---- 933

Query: 756  QQKQQTGDHVVTEVRIASE----------VRPSIDLDNQPPLVSEIE-----DTQQSEFD 815
             Q  ++     +E+ I S+          + P + LD +P  V ++      D   SE++
Sbjct: 934  DQNTESDHDYQSEIEINSDPLVNDFSSQSINP-LQLDKEP--VQKVRAPKEVDADISEYN 993

Query: 816  ----GIQSQQERILIDE----GAFIEESSS------------------------------ 875
                 ++S+   I+  E    G  +E  ++                              
Sbjct: 994  ILPSPVRSRTPHIINKESTEMGGTVESDTTSPRHSSTFTARNQKRPGSPNDMIDLTSQDR 1053

Query: 876  -NNDLQNYQLTR------DRVQRERHAPIRY-----------------GYADLVAYALTC 935
             N  L+N + TR        +QR     I+Y                     +++     
Sbjct: 1054 VNYGLENIKTTRLGGTEEPYIQRNSDTNIKYRTTNSTPSIDDRSSNSESTTPIISIETKA 1113

Query: 936  AAD---SIEAEP------------------------------------------------ 995
              D   SI+ +P                                                
Sbjct: 1114 VCDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTHQSPTDTSDVS 1173

Query: 996  ------------------------------------------------------------ 1055
                                                                        
Sbjct: 1174 KDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPPR 1233

Query: 1056 -----------------------LTFEEAIV----SDSKKQWKDAMEEELFSLHKNQTW- 1115
                                   L ++EAI     +  K ++ +A  +E+  L K  TW 
Sbjct: 1234 SKKRINLIAAIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWD 1293

Query: 1116 --------SLVPKPPNQKLIQSKWIY-KIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHE 1175
                     + PK    K+I S +I+ K + GT       +KAR VA+G  Q       +
Sbjct: 1294 TNKYYDRNDIDPK----KVINSMFIFNKKRDGT-------HKARFVARGDIQHPDTYDSD 1353

Query: 1176 IFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMV 1235
            + S  V H ++   LSIA+  D +I Q+D+++A+L+ +++E +Y+  P      G  D +
Sbjct: 1354 MQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHL---GLNDKL 1413

Query: 1236 CRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY--WKQSQKGTYIYLLLYVDD 1295
             RL KSLYGLKQS   WY    ++++      N  D      W    K + + + L+VDD
Sbjct: 1414 LRLRKSLYGLKQSGANWYETIKSYLI------NCCDMQEVRGWSCVFKNSQVTICLFVDD 1473

Query: 1296 MILVSKDYAEICELKKQLSNEFEMK--DLGELKR-----ILGMDVKRDREKGLLTISQES 1325
            MIL SKD     ++   L  +++ K  +LGE        ILG+++K  R K  + +  E 
Sbjct: 1474 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSK-YMKLGMEK 1533

[Close]

BLAST of Pay0015487 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 2625.1 bits (6803), Expect = 0.0e+00
Identity = 1321/1344 (98.29%), Postives = 1324/1344 (98.51%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY--------------FSYD 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMV +              F   
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

Query: 1321 DMLTKALSAHRFKYLLDELNVKSG 1331
            DMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1321 DMLTKALSAHRFKYLLDELNVKSG 1344

[Close]

BLAST of Pay0015487 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 2511.5 bits (6508), Expect = 0.0e+00
Identity = 1273/1331 (95.64%), Postives = 1276/1331 (95.87%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY--------------FSYD 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMV +              F   
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1318
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

[Close]

BLAST of Pay0015487 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 2460.3 bits (6375), Expect = 0.0e+00
Identity = 1254/1331 (94.21%), Postives = 1257/1331 (94.44%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY--------------FSYD 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMV +              F   
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1318
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

[Close]

BLAST of Pay0015487 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 2306.2 bits (5975), Expect = 0.0e+00
Identity = 1154/1174 (98.30%), Postives = 1156/1174 (98.47%), Query Frame = 0


Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY-------- 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMV +        
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  ------FSYDPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
                  F   PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1070
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1310
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1311 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1331
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]

BLAST of Pay0015487 vs. ExPASy TrEMBL
Match: A0A5A7TP18 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001600 PE=4 SV=1)

HSP 1 Score: 2004.9 bits (5193), Expect = 0.0e+00
Identity = 1052/1226 (85.81%), Postives = 1065/1226 (86.87%), Query Frame = 0


Query: 111  MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY-------- 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMV +        
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  ------FSYDPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
                  F   PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 951  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 1010
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 1011 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1070
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1071 REKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1130
            +EKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1131 NAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1190
            NAVGSIMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1191 DKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1250
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1251 AVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1310
            AVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

Query: 1311 KDVELVKVHTVENLSDMLTKALSAHR 1318
            KDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1201 KDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]

BLAST of Pay0015487 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2625.1 bits (6803), Expect = 0.0e+00
Identity = 1321/1344 (98.29%), Postives = 1324/1344 (98.51%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY--------------FSYD 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMV +              F   
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

Query: 1321 DMLTKALSAHRFKYLLDELNVKSG 1331
            DMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1321 DMLTKALSAHRFKYLLDELNVKSG 1344

[Close]

BLAST of Pay0015487 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 2511.5 bits (6508), Expect = 0.0e+00
Identity = 1273/1331 (95.64%), Postives = 1276/1331 (95.87%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY--------------FSYD 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMV +              F   
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA           
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA----------- 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
                             RLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  -----------------RLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1318
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303

[Close]

BLAST of Pay0015487 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2460.3 bits (6375), Expect = 0.0e+00
Identity = 1254/1331 (94.21%), Postives = 1257/1331 (94.44%), Query Frame = 0


Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY--------------FSYD 300
            KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMV +              F   
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960
            GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1318
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

[Close]

BLAST of Pay0015487 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2306.2 bits (5975), Expect = 0.0e+00
Identity = 1154/1174 (98.30%), Postives = 1156/1174 (98.47%), Query Frame = 0


Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY-------- 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMV +        
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  ------FSYDPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
                  F   PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
            LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1070
            QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1310
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

Query: 1311 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1331
            VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Sbjct: 1141 VKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG 1174

[Close]

BLAST of Pay0015487 vs. NCBI nr
Match: KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2004.9 bits (5193), Expect = 0.0e+00
Identity = 1052/1226 (85.81%), Postives = 1065/1226 (86.87%), Query Frame = 0


Query: 111  MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 170
            MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVVY-------- 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMV +        
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  ------FSYDPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
                  F   PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK              
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-------------- 780

Query: 891  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 950
                               PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIY
Sbjct: 781  -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIY 840

Query: 951  MAQPKGYEVKGKE-----DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACV 1010
            MAQPKGYEVKGKE     DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG          
Sbjct: 841  MAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------- 900

Query: 1011 YWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRD 1070
                    T  +++L                 LKK  ++ +      ELKRILGMDVKRD
Sbjct: 901  -------STETHMMLVFTGN-----------NLKKVRTSIY----CCELKRILGMDVKRD 960

Query: 1071 REKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1130
            +EKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC
Sbjct: 961  KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYC 1020

Query: 1131 NAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDC 1190
            NAVGSIMYLMICTRPDLGYAMS                          SASVSLCYSRDC
Sbjct: 1021 NAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDC 1080

Query: 1191 DKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGE 1250
            DKSTLLEGFTDADYAADLDKR  L                       L    +EYISLGE
Sbjct: 1081 DKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGE 1113

Query: 1251 AVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1310
            AVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Sbjct: 1141 AVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ 1113

Query: 1311 KDVELVKVHTVENLSDMLTKALSAHR 1318
            KDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1201 KDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]

BLAST of Pay0015487 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 305.8 bits (782), Expect = 1.7e-82
Identity = 183/494 (37.04%), Postives = 288/494 (58.30%), Query Frame = 0


Query: 798  LTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKW 857
            L C A +   EP T+ EA        W  AM++E+ ++    TW +   PPN+K I  KW
Sbjct: 77   LVCIAKA--KEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKW 136

Query: 858  IYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFI 917
            +YKIK  + G  + RYKARLVAKGYTQ+EG+DF E FSPV + +S++LIL+I+  ++  +
Sbjct: 137  VYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 196

Query: 918  EQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDM----VCRLHKSLYGLKQSPRQWYIRF 977
             Q+D++ AFL+G+L+E IYM  P GY  +  + +    VC L KS+YGLKQ+ RQW+++F
Sbjct: 197  HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 256

Query: 978  DTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFE 1037
               ++  GF ++  D   Y+ +     ++ +L+YVDD+I+ S + A + ELK QL + F+
Sbjct: 257  SVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 316

Query: 1038 MKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSS 1097
            ++DLG LK  LG+++ R      + I Q  Y + LL++  + G K  S P+      S+ 
Sbjct: 317  LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 376

Query: 1098 QCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWV 1157
                +  + ++     Y   +G +MYL I TR D+ +A++ +S+F   P   H +AV  +
Sbjct: 377  ----SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 436

Query: 1158 LRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNL 1217
            L Y+KG+    L YS   +    L+ F+DA + +  D RRS +G+   L  +++SWK   
Sbjct: 437  LHYIKGTVGQGLFYSSQAEMQ--LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 496

Query: 1218 QPVVALSTTESEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNPSHH 1277
            Q VV+ S+ E+EY +L  A  E +WL +   EL L      ++ CD+ +AIH+A N   H
Sbjct: 497  QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 552

Query: 1278 ERSKHIDVKFHYIR 1287
            ER+KHI+   H +R
Sbjct: 557  ERTKHIESDCHSVR 552

[Close]

BLAST of Pay0015487 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 8.4e-26
Identity = 81/237 (34.18%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 1002 IYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQ 1061
            +YLLLYVDD++L       +  L  QLS+ F MKDLG +   LG+ +K     GL  +SQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK-THPSGLF-LSQ 60

Query: 1062 ESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLM 1121
              Y  ++L    M   K +STPL    +L+SS       +  +  +I     VG++ YL 
Sbjct: 61   TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQYLT 120

Query: 1122 ICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFT 1181
            + TRPD+ YA++++ + M  P    +  +K VLRY+KG+    L   ++   +  ++ F 
Sbjct: 121  L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFC 180

Query: 1182 DADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1239
            D+D+A     RRS +G    L  N++SW    QP V+ S+TE+EY +L     E  W
Sbjct: 181  DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0015487 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-25
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 362 GVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQ 421
           GV+KV KG    L+G     LY+L+G+  +G + +A     D + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 422 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYVHSDLWG 474
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDYVHSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of Pay0015487 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-17
Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 796 YALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQS 855
           Y+LT    +I+ EP   +  I +     W  AM+EEL +L +N+TW LVP P NQ ++  
Sbjct: 16  YSLTITT-TIKKEP---KSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGC 75

Query: 856 KWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDM 915
           KW++K K  + G +  R KARLVAKG+ Q+EG+ F E +SPVVR ++IR IL++A   ++
Sbjct: 76  KWVFKTKLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130

[Close]

BLAST of Pay0015487 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.3e-17
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 572 NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHL 631
           NRTI+E+ R +L    LP  F  +AA TA ++IN+ PSTA+N   P EVW    P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 632 RVFGCTAYAHVKDGKLNKRALK 654
           R FGC AY H  +GKL  RA K
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKK 83

The following BLAST results are available for this feature:

BLAST of Pay0015487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.2e-292	41.59	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.7e-180	30.90	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	9.3e-139	28.88	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.3e-136	28.13	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25384	3.8e-39	20.42	Transposon Ty2-C Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Pay0015487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UB25	0.0e+00	98.29	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7U2U7	0.0e+00	95.64	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5D3DNU1	0.0e+00	94.21	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3CTV2	0.0e+00	98.30	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488...	[more]
A0A5A7TP18	0.0e+00	85.81	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Pay0015487 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050719.1	0.0e+00	98.29	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0047995.1	0.0e+00	95.64	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
TYK25306.1	0.0e+00	94.21	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK13826.1	0.0e+00	98.30	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0043826.1	0.0e+00	85.81	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0015487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.7e-82	37.04	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	8.4e-26	34.18	DNA/RNA polymerases superfamily protein	[more]
ATMG00300.1	4.1e-25	49.11	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	1.9e-17	43.33	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	9.3e-17	48.78	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	GENE3D	4.10.60.10		coord: 196..251 e-value: 2.1E-6 score: 29.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 54..179 e-value: 1.6E-30 score: 105.7
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 331..1198 coord: 2..233
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1178..1315 e-value: 3.22086E-66 score: 217.721
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 223..239 e-value: 0.004 score: 26.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 222..238 score: 9.553822
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 838..1084 e-value: 8.1E-72 score: 241.7
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 467..562 e-value: 1.4E-10 score: 41.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 457..625 score: 24.214426
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 456..636 e-value: 4.9E-45 score: 155.3
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 381..448 e-value: 2.2E-16 score: 59.4
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 208..243
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 465..634
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 837..1283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015487.1	Pay0015487.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding