Pay0015031 (gene) Melon (Payzawat) v1

Overview


Name	Pay0015031
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transmembrane protein
Location	chr05: 4939760 .. 4940557 (-)
RNA-Seq Expression	Pay0015031
Synteny	Pay0015031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCAAAATCAAAATTATATTATAATATTAATATTACACAGCAAACCTAATTTCAAAATCTCACACCAAAAGAAAATACAAACTTATTCAAACTAATATCTAACAAAAAGAAGAAAAAAAAAAGAAAAAGAAAAAAGATGAGAAAAATGAACAACTTGGATGATTGATTCATTCATATGTCTGTAAAAATTTGTATAAACACACGATTTTTTTTCTTTTTTTTTTTTTCATTTTTGAGCTTCAGACTGAAATGTCCGGCACCGGCAAGGCAACAAAGAAGAAGAGTTCTAATTCTGGAGGGGCAAAAAAGGCAATGGGTGATCGTCGGAATGAGCAATCGGAAACGGCTCTAGGTTTCTTCGGCGCCGGTGGACACGTCAGAATCTCTGGGATTCTATGTCTCTCTGCTTTTGGAGTACTGCAACCGCCGTCGGAACACTCGTCGCCAAATTCCACGATGTCGTTTTGCGTGACGGCGGCTGGAATCTCCGTCTTCTGCAGCGGTTGTTTCTTGTTCGTCGTTTTCTTGATTTTCTTCGTTAGCTTCAAGTTGGGTAAACTTCTTCTCGTTCTCGTAGCCACTCTTGCTCCTGAAGGCGCCATTTTTGAAGGAAAACAGAGGAATTTGAGTAAGAAGAAAAACAGAGGGGTTTAAGCGAAAAGATTTAAGCTTTAGAAAGGATTCGTTCTAAAAAGAAAAGGGTTTGAGAGAATTTGGGAAGATAACCATTAAAGAGAAGGATTGAAGTTGAAAAACCCACAAAACCCTAGAGAGAGAGAGAGGAACAGAGTGAAAG

mRNA sequence

TTCCCAAAATCAAAATTATATTATAATATTAATATTACACAGCAAACCTAATTTCAAAATCTCACACCAAAAGAAAATACAAACTTATTCAAACTAATATCTAACAAAAAGAAGAAAAAAAAAAGAAAAAGAAAAAAGATGAGAAAAATGAACAACTTGGATGATTGATTCATTCATATGTCTGTAAAAATTTGTATAAACACACGATTTTTTTTCTTTTTTTTTTTTTCATTTTTGAGCTTCAGACTGAAATGTCCGGCACCGGCAAGGCAACAAAGAAGAAGAGTTCTAATTCTGGAGGGGCAAAAAAGGCAATGGGTGATCGTCGGAATGAGCAATCGGAAACGGCTCTAGGTTTCTTCGGCGCCGGTGGACACGTCAGAATCTCTGGGATTCTATGTCTCTCTGCTTTTGGAGTACTGCAACCGCCGTCGGAACACTCGTCGCCAAATTCCACGATGTCGTTTTGCGTGACGGCGGCTGGAATCTCCGTCTTCTGCAGCGGTTGTTTCTTGTTCGTCGTTTTCTTGATTTTCTTCGTTAGCTTCAAGTTGGGTAAACTTCTTCTCGTTCTCGTAGCCACTCTTGCTCCTGAAGGCGCCATTTTTGAAGGAAAACAGAGGAATTTGAGTAAGAAGAAAAACAGAGGGGTTTAAGCGAAAAGATTTAAGCTTTAGAAAGGATTCGTTCTAAAAAGAAAAGGGTTTGAGAGAATTTGGGAAGATAACCATTAAAGAGAAGGATTGAAGTTGAAAAACCCACAAAACCCTAGAGAGAGAGAGAGGAACAGAGTGAAAG

Coding sequence (CDS)

ATGTCCGGCACCGGCAAGGCAACAAAGAAGAAGAGTTCTAATTCTGGAGGGGCAAAAAAGGCAATGGGTGATCGTCGGAATGAGCAATCGGAAACGGCTCTAGGTTTCTTCGGCGCCGGTGGACACGTCAGAATCTCTGGGATTCTATGTCTCTCTGCTTTTGGAGTACTGCAACCGCCGTCGGAACACTCGTCGCCAAATTCCACGATGTCGTTTTGCGTGACGGCGGCTGGAATCTCCGTCTTCTGCAGCGGTTGTTTCTTGTTCGTCGTTTTCTTGATTTTCTTCGTTAGCTTCAAGTTGGGTAAACTTCTTCTCGTTCTCGTAGCCACTCTTGCTCCTGAAGGCGCCATTTTTGAAGGAAAACAGAGGAATTTGAGTAAGAAGAAAAACAGAGGGGTTTAA

Protein sequence

MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFEGKQRNLSKKKNRGV

Homology

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BLAST of Pay0015031 vs. ExPASy TrEMBL
Match: A0A5D3BCF0 (Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001030 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.9e-61
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60
           MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP
Sbjct: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60

Query: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
           SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE
Sbjct: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120

Query: 121 GKQRNLSKKKNR 133
           GKQRNLSKKK +
Sbjct: 121 GKQRNLSKKKKQ 132

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BLAST of Pay0015031 vs. ExPASy TrEMBL
Match: A0A1S4DXN3 (uncharacterized protein LOC107991009 OS=Cucumis melo OX=3656 GN=LOC107991009 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.9e-61
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60
           MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP
Sbjct: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60

Query: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
           SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE
Sbjct: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120

Query: 121 GKQRNLSKKKNR 133
           GKQRNLSKKK +
Sbjct: 121 GKQRNLSKKKKQ 132

[Close]

BLAST of Pay0015031 vs. ExPASy TrEMBL
Match: A0A7G2EN36 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS11614 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.4e-06
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 66
          A  KKSS SGGAKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 13 ALTKKSSISGGAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 71

[Close]

BLAST of Pay0015031 vs. ExPASy TrEMBL
Match: A0A7J0FBZ7 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_11g0005400 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSSP 66
          A KKKSS SGG K A+G+ R+E     L FFG  GH +ISG L L AFGV QP +  S  
Sbjct: 5  ANKKKSSISGGEKAAIGELRSENLAATLFFFGGSGHDKISGNLNLFAFGVEQPDTS-SLL 64

Query: 67 NSTMSFCVTAAGIS 81
          +S++ F  T +G S
Sbjct: 65 SSSLGFFSTKSGFS 77

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BLAST of Pay0015031 vs. NCBI nr
Match: XP_016900741.1 (PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo] >KAA0041417.1 transmembrane protein [Cucumis melo var. makuwa] >TYJ96135.1 transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60
           MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP
Sbjct: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60

Query: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
           SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE
Sbjct: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120

Query: 121 GKQRNLSKKKNR 133
           GKQRNLSKKK +
Sbjct: 121 GKQRNLSKKKKQ 132

[Close]

BLAST of Pay0015031 vs. NCBI nr
Match: QHO18661.1 (uncharacterized protein DS421_11g322430 [Arachis hypogaea])

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-06
Identity = 55/116 (47.41%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 9   KKKSSNSGGAKKAMGDRRNEQ---SETALGFFGAGGHVRISGILCLSAFGV-LQPPSEHS 68
           KKK S SGG K   GDRR EQ    E  L FFGAGGHV ISGIL  S FGV  QPP   S
Sbjct: 2   KKKRSKSGGEKNESGDRRKEQFEDDEITLCFFGAGGHVEISGILNFSPFGVEQQPPLTSS 61

Query: 69  SPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 121
             +ST S  +     S+FC     F  FL+FFV   +G  +++++    PEGA+ E
Sbjct: 62  MTSSTSSSFLFL--FSLFC----CFFKFLLFFVFGFVGSDVVIVL----PEGAMRE 107

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BLAST of Pay0015031 vs. NCBI nr
Match: CAD5323680.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 66
          A  KKSS SGGAKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 13 ALTKKSSISGGAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 71

[Close]

BLAST of Pay0015031 vs. NCBI nr
Match: QHO48225.1 (uncharacterized protein DS421_1g03730 [Arachis hypogaea])

HSP 1 Score: 58.2 bits (139), Expect = 6.5e-05
Identity = 38/66 (57.58%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 9  KKKSSNSGGAKKAMGDRRNEQ---SETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 68
          KKK S SGG K   GD R EQ    E  L FFGAGGHV ISGIL  S FGV Q P   SS
Sbjct: 2  KKKRSKSGGEKNESGDLRKEQFEDDEITLCFFGAGGHVEISGILNFSPFGVEQQPPLTSS 61

Query: 69 PNSTMS 72
            S+ S
Sbjct: 62 MTSSSS 67

[Close]

BLAST of Pay0015031 vs. NCBI nr
Match: GFY96234.1 (hypothetical protein Acr_11g0005400 [Actinidia rufa])

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-04
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSSP 66
          A KKKSS SGG K A+G+ R+E     L FFG  GH +ISG L L AFGV QP +  S  
Sbjct: 5  ANKKKSSISGGEKAAIGELRSENLAATLFFFGGSGHDKISGNLNLFAFGVEQPDTS-SLL 64

Query: 67 NSTMSFCVTAAGIS 81
          +S++ F  T +G S
Sbjct: 65 SSSLGFFSTKSGFS 77

[Close]

BLAST of Pay0015031 vs. TAIR 10
Match: AT3G20900.1 (unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06
Identity = 31/57 (54.39%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 9  KKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 66
          K    N   AKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 3  KVARKNKTSAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 59

The following BLAST results are available for this feature:

BLAST of Pay0015031 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0015031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCF0	6.9e-61	98.48	Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18...	[more]
A0A1S4DXN3	6.9e-61	98.48	uncharacterized protein LOC107991009 OS=Cucumis melo OX=3656 GN=LOC107991009 PE=...	[more]
A0A7G2EN36	6.4e-06	62.71	(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC...	[more]
A0A7J0FBZ7	1.6e-04	50.00	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_11g0005400 PE=4 SV=1	[more]

BLAST of Pay0015031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900741.1	1.4e-60	98.48	PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo] >KAA0041417.1 tra...	[more]
QHO18661.1	1.2e-06	47.41	uncharacterized protein DS421_11g322430 [Arachis hypogaea]	[more]
CAD5323680.1	1.3e-05	62.71	unnamed protein product [Arabidopsis thaliana]	[more]
QHO48225.1	6.5e-05	57.58	uncharacterized protein DS421_1g03730 [Arachis hypogaea]	[more]
GFY96234.1	3.2e-04	50.00	hypothetical protein Acr_11g0005400 [Actinidia rufa]	[more]

BLAST of Pay0015031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20900.1	1.7e-06	54.39	unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacter...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0015031.1	Pay0015031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane