Pay0014976 (gene) Melon (Payzawat) v1

Overview
NamePay0014976
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionElongation factor
Locationchr07: 4778182 .. 4778570 (-)
RNA-Seq ExpressionPay0014976
SyntenyPay0014976
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATGGTGGATCAAGATAAGTACTCCGTTGAGAAGTTTTACCTTCAGAGTCGCCTCTCGTCTCGGATTTCGCAAACGCGGTATGAGATTTCTTTACATATATATAAATTTGAGAAAATAAAACAATTCCGATTCTCAATCTCAAATCCAGAAGGGATTTGTTCGTTTTTGGTTGAATTGGGGATTTTATGAAATGAGTTAGGGCTACTGAAATTGGGCCAAGATGTGAAGGCATGTGAATATGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCAACTAATTGGATCGTCCGAAAGGCGCCGGAAAAGGAGATCGCTATGGAATATATTTTGGTGGGCTCGATCAGCCCCATGCATCGGCAGAATCTGA

mRNA sequence

ATGGAATGGTGGATCAAGATAAGTACTCCGTTGAGAAGTTTTACCTTCAGAGTCGCCTCTCGTCTCGGATTTCGCAAACGCGGGCTACTGAAATTGGGCCAAGATGTGAAGGCATGTGAATATGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCAACTAATTGGATCGTCCGAAAGGCGCCGGAAAAGGAGATCGCTATGGAATATATTTTGGTGGGCTCGATCAGCCCCATGCATCGGCAGAATCTGA

Coding sequence (CDS)

ATGGAATGGTGGATCAAGATAAGTACTCCGTTGAGAAGTTTTACCTTCAGAGTCGCCTCTCGTCTCGGATTTCGCAAACGCGGGCTACTGAAATTGGGCCAAGATGTGAAGGCATGTGAATATGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCAACTAATTGGATCGTCCGAAAGGCGCCGGAAAAGGAGATCGCTATGGAATATATTTTGGTGGGCTCGATCAGCCCCATGCATCGGCAGAATCTGA

Protein sequence

MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLIGSSERRRKRRSLWNIFWWARSAPCIGRI
Homology
BLAST of Pay0014976 vs. ExPASy TrEMBL
Match: A0A0A0L522 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642370 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41
Identity = 79/88 (89.77%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          MEWWIK+S PLRSFTFRVA RLGFRKRGL+KLG+DVKACEYEDVHVMWEMLKRNETDQLI
Sbjct: 1  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLI 60

Query: 61 GSSERRRKRRSLWNIFWWARSAPCIGRI 89
          GSSERR+KR+SLWNIFWWARSAPC+G+I
Sbjct: 61 GSSERRQKRKSLWNIFWWARSAPCLGKI 88

BLAST of Pay0014976 vs. ExPASy TrEMBL
Match: A0A7N2RF01 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21
Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          MEWW K+  P+R     VA+RLG RK GLLKL  DV  CEYEDV VMWEMLKR+ET+Q++
Sbjct: 3  MEWWDKVKIPIRRVWIGVATRLGIRKSGLLKLRHDVSTCEYEDVRVMWEMLKRSETEQVV 62

Query: 61 GSSERRRKRRSLWNIFWWARSAPCIGR 88
               + K+RS WNIF WAR  PC+ R
Sbjct: 63 ---PEKSKKRSFWNIFDWARCTPCLCR 86

BLAST of Pay0014976 vs. ExPASy TrEMBL
Match: A0A2N9EM58 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3673 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.6e-19
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          MEWW K+  P+R     VA RLG RK GLLKL QDV+ CEYEDVHVMWE+L+R+ET+++ 
Sbjct: 5  MEWWDKVKIPMRLIWIGVAKRLGIRKNGLLKLRQDVRTCEYEDVHVMWEILRRSETERI- 64

Query: 61 GSSERRRKRRSLWNIFWWARSAPCIGR 88
               + K+RS WN + WAR  P + R
Sbjct: 65 ---PEKSKKRSPWNFYEWARCTPYLCR 87

BLAST of Pay0014976 vs. ExPASy TrEMBL
Match: B9R721 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1587890 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.3e-19
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          MEWW K+  P+R     VA R+G RKRGLLKL  DV+ACEYEDV +MWEML+R ET+   
Sbjct: 1  MEWWDKVMHPVRRVWKGVALRIGIRKRGLLKLRHDVRACEYEDVRIMWEMLRRTETESAR 60

Query: 61 GSSERRRKRRSLWNIFWWARSAPCIGR 88
           S   + K+R  W  F WAR +P  GR
Sbjct: 61 QSQPVKSKKRCFWKCFSWARCSPYFGR 87

BLAST of Pay0014976 vs. ExPASy TrEMBL
Match: A0A218WD46 (uncharacterized protein LOC116215154 OS=Punica granatum OX=22663 GN=LOC116215154 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          ++ W K+  PLR+    VA+RLG R RGLLKL QDV+ CEY+DVHVMW MLK+NET +  
Sbjct: 3  LDCWDKMRVPLRNLWIDVATRLGVRNRGLLKLRQDVRRCEYDDVHVMWNMLKKNET-EAA 62

Query: 61 GSSERRRKRRSLWNIFWWARSAP 84
            S +RRK+RS W+ F WAR AP
Sbjct: 63 ALSPKRRKKRSFWSFFDWARCAP 84

BLAST of Pay0014976 vs. NCBI nr
Match: KAG6608437.1 (hypothetical protein SDJN03_01779, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.7 bits (387), Expect = 7.5e-34
Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 0

Query: 1   MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
           MEWWIK+++PLR FT RVASRLG+RKRGLLKLG+DVKACEYEDVHVMWEMLKRNET+ + 
Sbjct: 69  MEWWIKVASPLRRFTSRVASRLGYRKRGLLKLGRDVKACEYEDVHVMWEMLKRNETEAVG 128

Query: 61  GSSERRRKRRSLWNIFWWARSAPCIG 87
               RRRK+R +WNIFWWARSAPCIG
Sbjct: 129 IPEGRRRKKRPIWNIFWWARSAPCIG 154

BLAST of Pay0014976 vs. NCBI nr
Match: KAG7024293.1 (hypothetical protein SDJN02_13107, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.0 bits (328), Expect = 5.2e-27
Identity = 59/86 (68.60%), Postives = 71/86 (82.56%), Query Frame = 0

Query: 1   MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
           M WW ++++PLR F+FR+ASRLGFRKRGLLKLG+DV+ACEY DV VMWEM+KRNE  +++
Sbjct: 48  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNE-KEVV 107

Query: 61  GSSERRRKRRSLWNIFWWARSAPCIG 87
           G  ERRRKRRSL NI WW  S  CIG
Sbjct: 108 GVQERRRKRRSLLNILWWGGSGACIG 132

BLAST of Pay0014976 vs. NCBI nr
Match: KAG6591414.1 (hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-24
Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 0

Query: 1   MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
           M WW ++++PLR F+FR+ASRLGFRKRGLLKLG+DV+ACEY DV VMWEM+KRNE  +++
Sbjct: 23  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNE-KEVV 82

Query: 61  GSSERRRKRRSLWNIFWWARS 82
           G  ERRRKRRSL NI WW  S
Sbjct: 83  GVQERRRKRRSLLNILWWGGS 102

BLAST of Pay0014976 vs. NCBI nr
Match: KAF7819640.1 (elongation factor [Senna tora])

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-20
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          ME W K+  P+RS   RVA+RLG RK GLLKL  DV+ACEY+D+HVMW ML+RN  D + 
Sbjct: 1  MELWRKLMYPMRSVWIRVATRLGIRKTGLLKLRHDVRACEYKDIHVMWGMLERN--DSVF 60

Query: 61 GSSERRRKRRSLWNIFWWARSAPCIGR 88
           S E+ +KRR+ W +F WAR APCI R
Sbjct: 61 ASPEKGKKRRNYWKLFRWARCAPCICR 85

BLAST of Pay0014976 vs. NCBI nr
Match: KAF3975031.1 (hypothetical protein CMV_001685 [Castanea mollissima])

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19
Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 0

Query: 1  MEWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLI 60
          MEWW K+  P+R     VA+RLG RK GLLKL  DV  CEYEDV VMWEMLKR+ET+Q+I
Sbjct: 1  MEWWYKVKIPIRRVWIGVATRLGIRKSGLLKLRHDVSTCEYEDVRVMWEMLKRSETEQVI 60

Query: 61 GSSERRRKRRSLWNIFWWARSAPCIGR 88
               + K+RS WNIF WA   P + R
Sbjct: 61 ---PEKSKKRSFWNIFEWASCTPYLCR 84

BLAST of Pay0014976 vs. TAIR 10
Match: AT5G43150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 7.8e-13
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 0

Query: 2  EWWIKISTPLRSFTFRVASRLGFRKRGLLKLGQDVKACEYEDVHVMWEMLKRNETDQLIG 61
          EWW  ++ P R    R   R+GFR  GLL+L  DV +CEYED+H+MW +L +NE    + 
Sbjct: 8  EWWNTMAFPTRRIWNRFTVRVGFRHSGLLRLEHDVSSCEYEDIHIMWNLLHKNEDLTRVP 67

Query: 62 SSERRRKRRS-LWNI 76
            +++++R+   WN+
Sbjct: 68 IQQQQQQRKKPCWNL 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5222.3e-4189.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642370 PE=4 SV=1[more]
A0A7N2RF012.7e-2158.62Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2N9EM585.6e-1954.02Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3673 PE=4 SV=1[more]
B9R7217.3e-1954.02Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1587890 PE=4 SV=1[more]
A0A218WD461.2e-1857.83uncharacterized protein LOC116215154 OS=Punica granatum OX=22663 GN=LOC116215154... [more]
Match NameE-valueIdentityDescription
KAG6608437.17.5e-3479.07hypothetical protein SDJN03_01779, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7024293.15.2e-2768.60hypothetical protein SDJN02_13107, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6591414.11.4e-2469.14hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF7819640.12.1e-2058.62elongation factor [Senna tora][more]
KAF3975031.11.8e-1957.47hypothetical protein CMV_001685 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
AT5G43150.17.8e-1340.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33181OS01G0778500 PROTEINcoord: 1..85
NoneNo IPR availablePANTHERPTHR33181:SF4EXPRESSED PROTEINcoord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0014976.1Pay0014976.1mRNA