Pay0014865 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014865
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Lactation elevated protein 1
Location	chr11: 7472340 .. 7475083 (+)
RNA-Seq Expression	Pay0014865
Synteny	Pay0014865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGATGGAATGCATCAATCGAGCATGAATATATTTGGTAGAAGCTTATATTGCAATCCTACTACATATCCCAAAGTGAGGAACTTCCCCAACAAAACTTCTTCCACCTTTGGACAAACTTTTGTATATAAGGTATCATATTACTCATTAAAAGGTTATTAAGTTTCTTGTTTTTTGCTATAATTTCAATTGCTGTCATAAGGTTCTATTAGTTGATGAACTCCCTTTTTAGATATATATATATCGGTTCTTTGATGCTTACGAAGAAAGAAAGTTTATGCTTGTATGGGTTTCCAAATGAAGTATGGGAAGTTAATCTACTTTGTTTTATATATTTTGGTGCGAGATTTGGATGAAGAAATGCTACGTAGTTGTTTTTTGTTTAGGTTTGTTCTCAAAGAATTTTTTTCCTTTATAAACAAAATTGTAATGCATAGAAGATAATATATATATGTTATTCAATGAGATATTAAATGTATAGTTCTATGGTTTATTTGATTGATTTTCAAGTATTTGCTATCTTCCTTATGCAGAAAAATTTCACTCTGGCATTGGAAGGTGTCCCAATATTTGGACTCCACAACAGAACAGCAACGTATCGTTTTGTCACTTTGGTTGATGTAAGTTTGACTTCATATTTGGATATTTTTTACTTTTATAACCTCAATTTACATGGAAGTTTGTTACTTTTGTGACTTTAAGTCGTTTGCTAGAACCTTTGAACCCCAGTTTAATGAATATCTATTTGCTAGAACTTTGAAAATCGCCTGTTCTTGTATTTTATTCTTGTTTATTTCCATTGATCTGTTTTTTAGAACAACTGAAGGCATTTTTAATCCCAAAACTATCATTCAAAGCAATAAAATTACATAAAAGATTATTCATGGAGAAAAACAAGTGATCTAATTGCAATGTTACATAATTTGCCTTGGTATTATTCATTGGACAAAGTGACTATAAGTTGATACCTTTTCTGTAACTATACACCATTGTAGTTTAAAATGGCCATGGAGTGTTTTAAATCAGTTGAAGGTGGTCTCTTAGTGGATACAAGTTGTGGTAGGGGTTTGTTTTCCAGAAATTTTGCAACATATGGATCTTTCTCAAGTGTAATTGCTCTTGATTTCTTTGAGAATATGCTTCTTCAATGTTATGACTTCATTAAGAAAGATACTACTCTCTTGAACAAGTAATTTTAGTGACCTTTATTCTCTCTTAGTTTAGTTCTTTAGAACTGCAATCACTATTATATTCGGCTAGCTTGTGTATTATTATTCTATTGGCTAATGATGCAAGCTCTAACTAAAATTTTACTTTCTGCATTGAATAAGTATAGACTTGAGATATGTAGTGCCCATTTGATGTGTTATTTGTAAATATGATTTTTGTAAGAGTAGTTATAGCCACTTCTTACATTCTAGTTTTGCTGGATGGTCGATTAGGTATGGCTAAGTTGGCTTGGTCTATATTGAACTGATTTTGAGAAAAGTTTTGAATTGTAATGTACTTATCTTTACGTCATATATGCATTTAATATTAAGAATTCAATTGGTTCCGATCACTATGGGTTTCTTTTACTATTTGGTGAGGATCTAGTTGATTAGGCTTTGGAGTGTCCATGTGTCTAGGACTCGCAAGTCAAAAGTCTGCTTGAGCTACATACAACTTAGTGTTGATTTACATTGATGTAGAATGTTTTTTAAGAGAAGAAATATTTTGATGTAGAATGTTAAAATAGTTCATTACCTTCTCGATTGAGGACAATATATTGAACACCATTCTTTAGGGGGTAATTAATTATTTGCAAACATACCAATGACTAATAAGTTGATGGTAATCAGCATCATTGACAACAACATAAGCCTTAGCCGATTGCTATATTGACTTTTGAACTCCTTCAGTTGGAAAACATTTTTTGCTATTTGCACCAAATTGATCACCTTGAGGGCAGACTCAACTCAATAACCAATGGCTTCAAAGTTTCATCATCTTTCAAAAATAGCAATGTTCTCGTGGCATATGCTTTTATTTTGCATATTCTTATCTTGATGTATAGAGTCATACTCTAACATTTCATTTTGTTTTCTTACTAAGTTTTGCAAGAATCTATTGGAGAAATGAAGCCATATTTACGGCAATTGATTGATTTATAGGCCTTTTTGTAGGTTTAGTAGCCAAATTTTGGTTCAAATGTACTTATTTAAATAGCTTGTTCGTACCCAAACATATACGTTCATTCTTCATTGTACAAACACTTTACGAACAATTGTACATATATTAAAGTATATATATTAAG

mRNA sequence

ATGAGTGATGGAATGCATCAATCGAGCATGAATATATTTGGTAGAAGCTTATATTGCAATCCTACTACATATCCCAAAGTGAGGAACTTCCCCAACAAAACTTCTTCCACCTTTGGACAAACTTTTGTATATAAGAAAAATTTCACTCTGGCATTGGAAGGTGTCCCAATATTTGGACTCCACAACAGAACAGCAACGTATCGTTTTGTCACTTTGGTTGATTTGGAAAACATTTTTTGCTATTTGCACCAAATTGATCACCTTGAGGGCAGACTCAACTCAATAACCAATGGCTTCAAAGTTTCATCATCTTTCAAAAATAGCAATGTTCTCGTGGCATATGCTTTTATTTTGCATATTCTTATCTTGATGTATAGAGTCATACTCTAACATTTCATTTTGTTTTCTTACTAAGTTTTGCAAGAATCTATTGGAGAAATGAAGCCATATTTACGGCAATTGATTGATTTATAGGCCTTTTTGTAGGTTTAGTAGCCAAATTTTGGTTCAAATGTACTTATTTAAATAGCTTGTTCGTACCCAAACATATACGTTCATTCTTCATTGTACAAACACTTTACGAACAATTGTACATATATTAAAGTATATATATTAAG

Coding sequence (CDS)

ATGAGTGATGGAATGCATCAATCGAGCATGAATATATTTGGTAGAAGCTTATATTGCAATCCTACTACATATCCCAAAGTGAGGAACTTCCCCAACAAAACTTCTTCCACCTTTGGACAAACTTTTGTATATAAGAAAAATTTCACTCTGGCATTGGAAGGTGTCCCAATATTTGGACTCCACAACAGAACAGCAACGTATCGTTTTGTCACTTTGGTTGATTTGGAAAACATTTTTTGCTATTTGCACCAAATTGATCACCTTGAGGGCAGACTCAACTCAATAACCAATGGCTTCAAAGTTTCATCATCTTTCAAAAATAGCAATGTTCTCGTGGCATATGCTTTTATTTTGCATATTCTTATCTTGATGTATAGAGTCATACTCTAA

Protein sequence

MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGLHNRTATYRFVTLVDLENIFCYLHQIDHLEGRLNSITNGFKVSSSFKNSNVLVAYAFILHILILMYRVIL

Homology

[Close]

BLAST of Pay0014865 vs. ExPASy TrEMBL
Match: A0A1S4E3W5 (uncharacterized protein LOC103501079 OS=Cucumis melo OX=3656 GN=LOC103501079 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.7e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGL 60
          MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGL
Sbjct: 1  MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGL 60

Query: 61 HNRTATYRFVTLVDLE 77
          HNRTATYRFVTLVD +
Sbjct: 61 HNRTATYRFVTLVDFK 76

[Close]

BLAST of Pay0014865 vs. ExPASy TrEMBL
Match: A0A438HJR0 (AFG1-like ATPase OS=Vitis vinifera OX=29760 GN=AFG1L_0 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-05
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDLENIFCY 82
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD  ++  +
Sbjct: 406 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDDSSLIAF 444

[Close]

BLAST of Pay0014865 vs. ExPASy TrEMBL
Match: A0A438HV88 (AFG1-like ATPase OS=Vitis vinifera OX=29760 GN=AFG1L_1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-05
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDLENIFCY 82
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD  ++  +
Sbjct: 396 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDDSSLIAF 434

[Close]

BLAST of Pay0014865 vs. ExPASy TrEMBL
Match: A0A1S4DV19 (lactation elevated protein 1 OS=Cucumis melo OX=3656 GN=LOC103487322 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-05
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDL 76
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD+
Sbjct: 370 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDV 402

[Close]

BLAST of Pay0014865 vs. ExPASy TrEMBL
Match: A0A5A7SYX6 (Lactation elevated protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00320 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-05
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDL 76
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD+
Sbjct: 370 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDV 402

[Close]

BLAST of Pay0014865 vs. NCBI nr
Match: XP_016902926.1 (PREDICTED: uncharacterized protein LOC103501079 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 7.6e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGL 60
          MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGL
Sbjct: 1  MSDGMHQSSMNIFGRSLYCNPTTYPKVRNFPNKTSSTFGQTFVYKKNFTLALEGVPIFGL 60

Query: 61 HNRTATYRFVTLVDLE 77
          HNRTATYRFVTLVD +
Sbjct: 61 HNRTATYRFVTLVDFK 76

[Close]

BLAST of Pay0014865 vs. NCBI nr
Match: RVW88372.1 (AFG1-like ATPase [Vitis vinifera])

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-05
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDLENIFCY 82
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD  ++  +
Sbjct: 396 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDDSSLIAF 434

[Close]

BLAST of Pay0014865 vs. NCBI nr
Match: RVW84703.1 (AFG1-like ATPase [Vitis vinifera])

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-05
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDLENIFCY 82
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD  ++  +
Sbjct: 406 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDDSSLIAF 444

[Close]

BLAST of Pay0014865 vs. NCBI nr
Match: KAA0035116.1 (lactation elevated protein 1 [Cucumis melo var. makuwa] >TYJ95963.1 lactation elevated protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-05
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDL 76
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD+
Sbjct: 370 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDV 402

[Close]

BLAST of Pay0014865 vs. NCBI nr
Match: CAE6172305.1 (unnamed protein product [Arabidopsis arenosa])

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-05
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDL 76
           ++KK  TLALEGVPIFGLHNRTA YRFVTLVD+
Sbjct: 354 LFKKFHTLALEGVPIFGLHNRTAAYRFVTLVDV 386

[Close]

BLAST of Pay0014865 vs. TAIR 10
Match: AT4G28070.2 (AFG1-like ATPase family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDL 76
           ++KK  TLALEGVP FGLHNRTA YRFVTLVD+
Sbjct: 353 LFKKFHTLALEGVPFFGLHNRTAAYRFVTLVDV 385

[Close]

BLAST of Pay0014865 vs. TAIR 10
Match: AT4G30490.1 (AFG1-like ATPase family protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 43  VYKKNFTLALEGVPIFGLHNRTATYRFVTLVDL 76
           ++KK  TLAL+ +P+FGLHNRTA YRFVTLVD+
Sbjct: 382 LFKKFHTLALDEIPVFGLHNRTAAYRFVTLVDV 414

[Close]

BLAST of Pay0014865 vs. TAIR 10
Match: AT4G28070.1 (AFG1-like ATPase family protein )

HSP 1 Score: 44.7 bits (104), Expect = 6.7e-05
Identity = 20/26 (76.92%), Postives = 21/26 (80.77%), Query Frame = 0


Query: 50  LALEGVPIFGLHNRTATYRFVTLVDL 76
           L L  VP FGLHNRTA YRFVTLVD+
Sbjct: 351 LGLFSVPFFGLHNRTAAYRFVTLVDV 376

The following BLAST results are available for this feature:

BLAST of Pay0014865 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0014865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3W5	3.7e-35	97.37	uncharacterized protein LOC103501079 OS=Cucumis melo OX=3656 GN=LOC103501079 PE=...	[more]
A0A438HJR0	1.8e-05	69.23	AFG1-like ATPase OS=Vitis vinifera OX=29760 GN=AFG1L_0 PE=3 SV=1	[more]
A0A438HV88	1.8e-05	69.23	AFG1-like ATPase OS=Vitis vinifera OX=29760 GN=AFG1L_1 PE=3 SV=1	[more]
A0A1S4DV19	2.3e-05	81.82	lactation elevated protein 1 OS=Cucumis melo OX=3656 GN=LOC103487322 PE=3 SV=1	[more]
A0A5A7SYX6	2.3e-05	81.82	Lactation elevated protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Pay0014865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902926.1	7.6e-35	97.37	PREDICTED: uncharacterized protein LOC103501079 [Cucumis melo]	[more]
RVW88372.1	3.7e-05	69.23	AFG1-like ATPase [Vitis vinifera]	[more]
RVW84703.1	3.7e-05	69.23	AFG1-like ATPase [Vitis vinifera]	[more]
KAA0035116.1	4.8e-05	81.82	lactation elevated protein 1 [Cucumis melo var. makuwa] >TYJ95963.1 lactation el...	[more]
CAE6172305.1	4.8e-05	81.82	unnamed protein product [Arabidopsis arenosa]	[more]

BLAST of Pay0014865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28070.2	1.3e-08	78.79	AFG1-like ATPase family protein	[more]
AT4G30490.1	1.4e-07	69.70	AFG1-like ATPase family protein	[more]
AT4G28070.1	6.7e-05	76.92	AFG1-like ATPase family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014865.1	Pay0014865.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding