Pay0014830 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014830
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	CCHC-type domain-containing protein
Location	chr04: 27324796 .. 27327475 (-)
RNA-Seq Expression	Pay0014830
Synteny	Pay0014830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAATGTCTGGAGATCATATCACCTCCAAACCAAATGAGGCTAGTCCCAAGGGAGCACATAATGTCATGGACCACTTCCTGACACTTATCGACTGAAAAACCCATCATAACGACAAGGGATTTAGGTTAATTACAACATCCTCCTAACCAGACCCTAATCAAATGTATTATGCACATATAGGGCCAACCAACTTTACGTTAAAAATGCCAGTCTCAAGTACCATTAGGGCACAAAAAATGATTACTCACCTTTTCATGAAGGGAACTACCGATATTTAAGATAACATGCTGCCAAAATTGACGTAGAATAATAGGCCCCCTTTCTAACCAACTATCATATTAAACTTAACAACGATGTCCATTATCTATAAAAAAAAAAAAAAAAAAATCGAACCTAGATCTCAAACTATCCTTAGAAGCAAAAGATAATAACCTCTGGTACCAAGACAAAAGACTTGAAATTATCTCAAATCACATAAATAGATTGACCCCACAAACTATAGGCCTCCATATAATGAGAGGGGGAAAAGGGTATACTAATGAATTTTTTGTGGTCTTTTACGTGTTTTTTTTAAAGTTGTCTTTACACTTTTTTTTAATTAATAGTTGCAATTTTACTGTATATGTTTTTATTCTAAATCAATTTACTCTATCACTATCCATTTTTTATTGATGAATAGAAAGATTGAATTTTGATTTGATATATCTTTTTCGTTTTTAAATAAGTCTTTATATATTTTTTAACAAGGGCACAAGGTTTGTGGTAATGCTGAAGGGTTGTGAATTGGTGCATGTGGTTTTGCTACATTGAGTTATTAACCATAACCACAACAACGACAAACAGTAAAAGGTTGCAACTACCACGAAAATAAGTATAATATGTATATATATTTATGTAACTCGAAAAAATTAAAAGAAAAAAGAACTTTGAATGATAACCATTTATATGGAAATTTTCAAACTCATAATAATAATAAAAATAAAATAAACCCACAAATTAAGATTTATTGTAAATATAATGATATTATAAATGTAGATATCCATAACCTATATAAGTTACAATTTTCATATAACTCTCACATTCAATTTCATATTGTAACATCCATCCCATTGAATTTCATAATGTAACTTATACATATGATGTCCTATAAATAGAGGAGTGTGGTGCATTTGTAAGACACACCACTATTGAGTTCAATTGTATTCTCTTCTCCCTCTCTTCTCTATTATTCACTTTGTTTGTTTCATTATCCTTTATTTCATAACACGTTATCAGCACGACGCTCTACAATTTTGTTATTTACAAAAGTTTTACCATGTCAAGTCTTACCAAATTAGAATTTCTAGCTCTTGATATCAATGGTGATAATTATTTATCATGGGTACTTGATACTGAAATTCATTTGGATGCCATGAATCTTGGAGAAACGATTAAAGAAGGAAACACGACTTCAAGTCAAGAAAAGGCAAAAGCCATGATTTTCCTTCGACATCATCTTCATGAGGGACTAAAGATTGAATATCTTACGATAAAAGATCCCTATGAACTATGGCAAAGTTTAAAAGAAAGGTATGATCATAAAAAAAGTGTGATTCTTATTAAAGCTCGATATGATTGGATGCACTTAAGGTTGCAAGATTTTAAATTAGTAAGTGATTATAATTCCGCATTATTTAAAATTTGTTCAAAATTATTATTATGCGGAGAAAAAGTTACTGATGAAGATATGTTAGAGAAAACCTTTTCAACATTTCATGTCTCGAATATGCTCTTGCAGCAGCAATATCGAGAAAGAGGTTTTAAAAAGTATTCCGAACTCATATCATGTCTTCTTGTGGCTGAACAAAATAATGAGTTATTAATGAAAAACCATGAATCTCGACCAATTGGAGCAACACCATTCCCTGAAGCGAATGTCGTATTTTTAAATAATATTAATGGTTGAGGTCGAGGTCGTGGCCGAGGTCGTGACCGTGGTAGAGGAAGAAGTAATTATACTTTACGTGGTAATAATGATTTAGATTTCAAGAAAACCACAAATGATGATCATAGAAGGAAGACTCCACAAAATAAGAAAATTAAAAGTGGTGAAAATCAATGTTTCCGTTGTGGTATGAATGGTCATTGGACTCGTACTTGTCGTACATCCAAGCACTTAGTCGACCTTTATCAAGCCTCATTGAAGGAAAAAGGGAAGAATGTGAAAGTAAACTTTGCCTATCCAGATGATGTATTTGACCCTTCCAACATGACCCATTTAGATGTGGCGGACTTCTTTGAGTCTCCTAAAGAGAAAAATGATGTTAATGAAGGAGTAGCAAATACTTCTTTTAATTATGATAATGTCCAAAACTAATATTTGCATTATGTTTTCTTTATTTAACATTTACTAGTTTATTTACATTATTTACATTTCAAGGTTCGTTTTTCTTTTTAACAAGAGACTTATTGTAATCGTTTTTTTTAATGAAGAGTTATGGACATTTCTCATATTTTGGTTGATTCAAAGATGAATAATGAAGAGTTATGTTTGGCAGATAGTGCAACTACGCACACAATACTTAAAAGTAAAAAATATTTTTCTACATTGACAATGCTTGAAGCAAATGTCAATACAATATCAGGTTCTACAAACTTGATTAAAGGTTTTGGTAGCAAACCTTATTTTGCCTAG

mRNA sequence

ATGAAAGAATGTCTGGAGATCATATCACCTCCAAACCAAATGAGGCTAGTCCCAAGGGAGCACATAATTCTTACCAAATTAGAATTTCTAGCTCTTGATATCAATGGTGATAATTATTTATCATGGGTACTTGATACTGAAATTCATTTGGATGCCATGAATCTTGGAGAAACGATTAAAGAAGGAAACACGACTTCAAGTCAAGAAAAGGCAAAAGCCATGATTTTCCTTCGACATCATCTTCATGAGGGACTAAAGATTGAATATCTTACGATAAAAGATCCCTATGAACTATGGCAAAGTTTAAAAGAAAGGTATGATCATAAAAAAAGTGTGATTCTTATTAAAGCTCGATATGATTGGATGCACTTAAGGTTGCAAGATTTTAAATTAGTAAGTGATTATAATTCCGCATTATTTAAAATTTGTTCAAAATTATTATTATGCGGAGAAAAAGTTACTGATGAAGATATGTTAGAGAAAACCTTTTCAACATTTCATGTCTCGAATATGCTCTTGCAGCAGCAATATCGAGAAAGAGGTTTTAAAAAGTATTCCGAACTCATATCATGTCTTCTTGTGGCTGAACAAAATAATGAGTTATTAATGAAAAACCATGAATCTCGACCAATTGGAGCAACACCATTCCCTGAAGCGAATGTCGTATTTTTAAATAATATTAATGGAAGAAGTAATTATACTTTACGTGGTAATAATGATTTAGATTTCAAGAAAACCACAAATGATGATCATAGAAGGAAGACTCCACAAAATAAGAAAATTAAAAGTGGTGAAAATCAATGTTTCCGTTGTGGTATGAATGGTCATTGGACTCGTACTTGTCGTACATCCAAGCACTTAGTCGACCTTTATCAAGCCTCATTGAAGGAAAAAGGGAAGAATGTGAAAGTAAACTTTGCCTATCCAGATGATGTATTTGACCCTTCCAACATGACCCATTTAGATGTGGCGGACTTCTTTGAGTCTCCTAAAGAGAAAAATGATGTTAATGAAGGAATGAATAATGAAGAGTTATGTTTGGCAGATAGTGCAACTACGCACACAATACTTAAAAGTAAAAAATATTTTTCTACATTGACAATGCTTGAAGCAAATGTCAATACAATATCAGGTTCTACAAACTTGATTAAAGGTTTTGGTAGCAAACCTTATTTTGCCTAG

Coding sequence (CDS)

ATGAAAGAATGTCTGGAGATCATATCACCTCCAAACCAAATGAGGCTAGTCCCAAGGGAGCACATAATTCTTACCAAATTAGAATTTCTAGCTCTTGATATCAATGGTGATAATTATTTATCATGGGTACTTGATACTGAAATTCATTTGGATGCCATGAATCTTGGAGAAACGATTAAAGAAGGAAACACGACTTCAAGTCAAGAAAAGGCAAAAGCCATGATTTTCCTTCGACATCATCTTCATGAGGGACTAAAGATTGAATATCTTACGATAAAAGATCCCTATGAACTATGGCAAAGTTTAAAAGAAAGGTATGATCATAAAAAAAGTGTGATTCTTATTAAAGCTCGATATGATTGGATGCACTTAAGGTTGCAAGATTTTAAATTAGTAAGTGATTATAATTCCGCATTATTTAAAATTTGTTCAAAATTATTATTATGCGGAGAAAAAGTTACTGATGAAGATATGTTAGAGAAAACCTTTTCAACATTTCATGTCTCGAATATGCTCTTGCAGCAGCAATATCGAGAAAGAGGTTTTAAAAAGTATTCCGAACTCATATCATGTCTTCTTGTGGCTGAACAAAATAATGAGTTATTAATGAAAAACCATGAATCTCGACCAATTGGAGCAACACCATTCCCTGAAGCGAATGTCGTATTTTTAAATAATATTAATGGAAGAAGTAATTATACTTTACGTGGTAATAATGATTTAGATTTCAAGAAAACCACAAATGATGATCATAGAAGGAAGACTCCACAAAATAAGAAAATTAAAAGTGGTGAAAATCAATGTTTCCGTTGTGGTATGAATGGTCATTGGACTCGTACTTGTCGTACATCCAAGCACTTAGTCGACCTTTATCAAGCCTCATTGAAGGAAAAAGGGAAGAATGTGAAAGTAAACTTTGCCTATCCAGATGATGTATTTGACCCTTCCAACATGACCCATTTAGATGTGGCGGACTTCTTTGAGTCTCCTAAAGAGAAAAATGATGTTAATGAAGGAATGAATAATGAAGAGTTATGTTTGGCAGATAGTGCAACTACGCACACAATACTTAAAAGTAAAAAATATTTTTCTACATTGACAATGCTTGAAGCAAATGTCAATACAATATCAGGTTCTACAAACTTGATTAAAGGTTTTGGTAGCAAACCTTATTTTGCCTAG

Protein sequence

MKECLEIISPPNQMRLVPREHIILTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLMKNHESRPIGATPFPEANVVFLNNINGRSNYTLRGNNDLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKNVKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKKYFSTLTMLEANVNTISGSTNLIKGFGSKPYFA

Homology

[Close]

BLAST of Pay0014830 vs. ExPASy TrEMBL
Match: A0A438ID00 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1841 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.9e-119
Identity = 229/386 (59.33%), Postives = 278/386 (72.02%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNI---NGRSNYTLRGNN----------------DLDFK 263
           +NH+SRP G+ PFPE N +         GR     RG N                 L  +
Sbjct: 184 RNHQSRPTGSEPFPEVNAISSQTRGRGRGRGRGRGRGRNPRYHGSYSNNSQKMKASLHHQ 243

Query: 264 KTTNDD---HRRKTPQNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKN 323
           K  N++      K  Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K KGK 
Sbjct: 244 KWNNNETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAKGKE 303

Query: 324 VKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKK 383
           +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+ K+
Sbjct: 304 IEMNFTDGDGL----DLTYYDI-DFF--------------------GDCATTHTILRDKR 363

Query: 384 YFSTLTMLEANVNTISGSTNLIKGFG 388
           YF  LT+++ANV+TISG+TNL++G G
Sbjct: 364 YFLELTLIKANVSTISGTTNLVEGSG 364

[Close]

BLAST of Pay0014830 vs. ExPASy TrEMBL
Match: A5B4M9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015758 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.9e-119
Identity = 227/386 (58.81%), Postives = 276/386 (71.50%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNI---NGRSNYTLRGNNDLDFKKTTNDDHRRKTP---- 263
           +NH+SRP G+ PFPE N +         GR     RG N       +N+  + K      
Sbjct: 184 RNHQSRPTGSEPFPEVNAISSQTRGRGRGRGRGXGRGXNPRYHGSYSNNSQKMKASLHHQ 243

Query: 264 ---------------QNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKN 323
                          Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K KGK 
Sbjct: 244 KWNNTETIQENGKRLQDKPXKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAKGKE 303

Query: 324 VKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKK 383
           +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+ K+
Sbjct: 304 IEMNFTDGDGL----DLTYYDI-DFF--------------------GDCATTHTILRDKR 363

Query: 384 YFSTLTMLEANVNTISGSTNLIKGFG 388
           YF  LT+++ANV+TISG+TNL++G G
Sbjct: 364 YFLELTLIKANVSTISGTTNLVEGSG 364

[Close]

BLAST of Pay0014830 vs. ExPASy TrEMBL
Match: A5AJ43 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006175 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 2.5e-119
Identity = 227/386 (58.81%), Postives = 275/386 (71.24%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EY T+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYFTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNI---NGRSNYTLRGNNDLDFKKTTNDDHRRKTP---- 263
           +NH+SRP G+ PFPE N +         GR     RG N       +N+  + K      
Sbjct: 184 RNHQSRPTGSEPFPEVNAISSQTRGRGRGRGRGRGRGRNPRYHGSYSNNSQKMKASLHHQ 243

Query: 264 ---------------QNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKN 323
                          Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K KGK 
Sbjct: 244 KWNNTETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAKGKE 303

Query: 324 VKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKK 383
           +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+ K+
Sbjct: 304 IEMNFTDGDGL----DLTYYDI-DFF--------------------GDCATTHTILRDKR 363

Query: 384 YFSTLTMLEANVNTISGSTNLIKGFG 388
           YF  LT++EANV+TISG+TNL++G G
Sbjct: 364 YFLELTLIEANVSTISGTTNLVEGSG 364

[Close]

BLAST of Pay0014830 vs. ExPASy TrEMBL
Match: A5C0A9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_035070 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.1e-117
Identity = 227/389 (58.35%), Postives = 275/389 (70.69%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRH+LHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHNLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRE  F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRECRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNINGRSNYTLRG----------------NNDLDFK--- 263
           +NH+SRP G+ PFPE N +  +   GR     RG                NN    K   
Sbjct: 184 RNHQSRPTGSEPFPEVNAI-SSQTRGRGRGRGRGRGRGHGRNPRYHGSYSNNSQKMKASL 243

Query: 264 ------KTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEK 323
                  T       K  Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K K
Sbjct: 244 HHQKWNNTETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAK 303

Query: 324 GKNVKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILK 383
           GK +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+
Sbjct: 304 GKEIEMNFTNGDGL----DLTYYDI-DFF--------------------GDCATTHTILR 363

Query: 384 SKKYFSTLTMLEANVNTISGSTNLIKGFG 388
            K+YF  LT+++ANV+TISG+TNL++G G
Sbjct: 364 DKRYFLELTLIKANVSTISGTTNLVEGSG 366

[Close]

BLAST of Pay0014830 vs. ExPASy TrEMBL
Match: A0A2N9I863 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47933 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 4.3e-111
Identity = 212/340 (62.35%), Postives = 248/340 (72.94%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           LTKLEF+ALDI+G NYLSW+LD EIHL+AMNLG+TIK+GN  S Q +AKAMIF+RHHLHE
Sbjct: 4   LTKLEFVALDISGKNYLSWILDAEIHLEAMNLGDTIKDGNQASPQNRAKAMIFIRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
            LK EYLT+KDP  LW +LKERY+H+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  ELKTEYLTVKDPLILWNNLKERYEHQKTVILPKARYDWMHLRLQDFKSVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+TDEDMLEKT++TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELL+
Sbjct: 124 SQLKLCGEKITDEDMLEKTYTTFHASNVLLQQQYRERKFTKYSELISCLLVAEQNNELLL 183

Query: 204 KNHESRPIGATPFPEANVVFLNNINGRSNYTLRGNNDLDFKKTTNDDHRRKTP------- 263
           KNH+SRP G+TPFPE N    +N  G  N   RG+      +T N   +  TP       
Sbjct: 184 KNHQSRPTGSTPFPEVNGTSFDNNRG-YNGRGRGHGRKRGGRTQNTPRKNTTPYHRKGNY 243

Query: 264 ------------QNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKNVKV 323
                       QNK  K+ E +C RCGM GHW RTCR  KHLVDLYQAS+KEKGK +++
Sbjct: 244 NETKQHGNGQGLQNKPPKTHEEKCLRCGMKGHWQRTCRMPKHLVDLYQASIKEKGKGIEM 303

Query: 324 NFAYPDDVFD---------PSNMTHLDVADFFESPKEKND 336
           NFA+  D  D           ++THLDV+DFFE    K D
Sbjct: 304 NFAHHSDPEDHMGYSDIPNKVDITHLDVSDFFEDANGKID 342

[Close]

BLAST of Pay0014830 vs. NCBI nr
Match: RVW94544.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-119
Identity = 229/386 (59.33%), Postives = 278/386 (72.02%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNI---NGRSNYTLRGNN----------------DLDFK 263
           +NH+SRP G+ PFPE N +         GR     RG N                 L  +
Sbjct: 184 RNHQSRPTGSEPFPEVNAISSQTRGRGRGRGRGRGRGRNPRYHGSYSNNSQKMKASLHHQ 243

Query: 264 KTTNDD---HRRKTPQNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKN 323
           K  N++      K  Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K KGK 
Sbjct: 244 KWNNNETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAKGKE 303

Query: 324 VKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKK 383
           +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+ K+
Sbjct: 304 IEMNFTDGDGL----DLTYYDI-DFF--------------------GDCATTHTILRDKR 363

Query: 384 YFSTLTMLEANVNTISGSTNLIKGFG 388
           YF  LT+++ANV+TISG+TNL++G G
Sbjct: 364 YFLELTLIKANVSTISGTTNLVEGSG 364

[Close]

BLAST of Pay0014830 vs. NCBI nr
Match: CAN60947.1 (hypothetical protein VITISV_015758 [Vitis vinifera])

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-119
Identity = 227/386 (58.81%), Postives = 276/386 (71.50%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNI---NGRSNYTLRGNNDLDFKKTTNDDHRRKTP---- 263
           +NH+SRP G+ PFPE N +         GR     RG N       +N+  + K      
Sbjct: 184 RNHQSRPTGSEPFPEVNAISSQTRGRGRGRGRGXGRGXNPRYHGSYSNNSQKMKASLHHQ 243

Query: 264 ---------------QNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKN 323
                          Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K KGK 
Sbjct: 244 KWNNTETIQENGKRLQDKPXKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAKGKE 303

Query: 324 VKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKK 383
           +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+ K+
Sbjct: 304 IEMNFTDGDGL----DLTYYDI-DFF--------------------GDCATTHTILRDKR 363

Query: 384 YFSTLTMLEANVNTISGSTNLIKGFG 388
           YF  LT+++ANV+TISG+TNL++G G
Sbjct: 364 YFLELTLIKANVSTISGTTNLVEGSG 364

[Close]

BLAST of Pay0014830 vs. NCBI nr
Match: CAN77974.1 (hypothetical protein VITISV_006175 [Vitis vinifera])

HSP 1 Score: 438.7 bits (1127), Expect = 5.2e-119
Identity = 227/386 (58.81%), Postives = 275/386 (71.24%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EY T+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYFTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRERRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNI---NGRSNYTLRGNNDLDFKKTTNDDHRRKTP---- 263
           +NH+SRP G+ PFPE N +         GR     RG N       +N+  + K      
Sbjct: 184 RNHQSRPTGSEPFPEVNAISSQTRGRGRGRGRGRGRGRNPRYHGSYSNNSQKMKASLHHQ 243

Query: 264 ---------------QNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGKN 323
                          Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K KGK 
Sbjct: 244 KWNNTETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAKGKE 303

Query: 324 VKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSKK 383
           +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+ K+
Sbjct: 304 IEMNFTDGDGL----DLTYYDI-DFF--------------------GDCATTHTILRDKR 363

Query: 384 YFSTLTMLEANVNTISGSTNLIKGFG 388
           YF  LT++EANV+TISG+TNL++G G
Sbjct: 364 YFLELTLIEANVSTISGTTNLVEGSG 364

[Close]

BLAST of Pay0014830 vs. NCBI nr
Match: CAN66208.1 (hypothetical protein VITISV_035070 [Vitis vinifera])

HSP 1 Score: 431.8 bits (1109), Expect = 6.4e-117
Identity = 227/389 (58.35%), Postives = 275/389 (70.69%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           +TKLEF+ALDI+G NYLSW+LD E+HLDAMNLG TIK+GN  S Q++AKA+IFLRH+LHE
Sbjct: 4   ITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHNLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP+ LW +LKERYDH+K+VIL KARYDWMHLRLQDFK VS+YNSALFKI 
Sbjct: 64  GLKNEYLTVKDPFTLWSNLKERYDHQKTVILPKARYDWMHLRLQDFKTVSEYNSALFKIS 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRE  F KYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGEKITEEDMLEKTFTTFHASNVLLQQQYRECRFTKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLNNINGRSNYTLRG----------------NNDLDFK--- 263
           +NH+SRP G+ PFPE N +  +   GR     RG                NN    K   
Sbjct: 184 RNHQSRPTGSEPFPEVNAI-SSQTRGRGRGRGRGRGRGHGRNPRYHGSYSNNSQKMKASL 243

Query: 264 ------KTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEK 323
                  T       K  Q+K  K+ EN C+RCGM GHW+RTCRT KHLVDLYQAS+K K
Sbjct: 244 HHQKWNNTETIQENGKRLQDKPPKNHENNCYRCGMKGHWSRTCRTPKHLVDLYQASIKAK 303

Query: 324 GKNVKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILK 383
           GK +++NF   D +    ++T+ D+ DFF                     D ATTHTIL+
Sbjct: 304 GKEIEMNFTNGDGL----DLTYYDI-DFF--------------------GDCATTHTILR 363

Query: 384 SKKYFSTLTMLEANVNTISGSTNLIKGFG 388
            K+YF  LT+++ANV+TISG+TNL++G G
Sbjct: 364 DKRYFLELTLIKANVSTISGTTNLVEGSG 366

[Close]

BLAST of Pay0014830 vs. NCBI nr
Match: XP_021716055.1 (uncharacterized protein LOC110683932 [Chenopodium quinoa])

HSP 1 Score: 417.5 bits (1072), Expect = 1.2e-112
Identity = 224/387 (57.88%), Postives = 267/387 (68.99%), Query Frame = 0


Query: 24  LTKLEFLALDINGDNYLSWVLDTEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHE 83
           L KLEF+ LDI G NYLSWVLD EIHLDA  LGETIKE N  + Q+KAKAMIFLRHHLHE
Sbjct: 4   LAKLEFVPLDITGKNYLSWVLDVEIHLDAKGLGETIKEANKATPQDKAKAMIFLRHHLHE 63

Query: 84  GLKIEYLTIKDPYELWQSLKERYDHKKSVILIKARYDWMHLRLQDFKLVSDYNSALFKIC 143
           GLK EYLT+KDP  LW +LKERYDH+K+VIL +ARY+W++LRLQDFK VS+YNS +FKI 
Sbjct: 64  GLKNEYLTVKDPQILWSNLKERYDHQKTVILPRARYEWLNLRLQDFKFVSEYNSDMFKIT 123

Query: 144 SKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYSELISCLLVAEQNNELLM 203
           S+L LCGE +TD +MLEKT+STFH +N++LQ QYRE+GFKKYSELISCLLVAEQNNELLM
Sbjct: 124 SQLKLCGENITDAEMLEKTYSTFHANNIVLQTQYREKGFKKYSELISCLLVAEQNNELLM 183

Query: 204 KNHESRPIGATPFPEANVVFLN----------NINGRSNYTLRGNNDLDFKK-------- 263
           KNHESRP G+TPFPEANV   N          + +GR     RG      +         
Sbjct: 184 KNHESRPTGSTPFPEANVTTHNGKETKNRDHSSSSGRGRGRGRGRGQWRGRGRGRGYGRG 243

Query: 264 -----TTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCRTSKHLVDLYQASLKEKGK 323
                T +  H++   +++K KS  N C+RCG  GHW+R CRT KHL++LYQ SLK KGK
Sbjct: 244 RGGHFTNSHSHQKWERRDEKEKSDNNICYRCGGKGHWSRVCRTPKHLIELYQESLK-KGK 303

Query: 324 NVKVNFAYPDDVFDPSNMTHLDVADFFESPKEKNDVNEGMNNEELCLADSATTHTILKSK 383
            V+                ++D+            V   MN EELCLADS TTHTILK+K
Sbjct: 304 KVE----------------NMDI----------TQVQFAMNGEELCLADSVTTHTILKNK 363

Query: 384 KYFSTLTMLEANVNTISGSTNLIKGFG 388
           KYFS L M   NV+TISGSTN+I+G G
Sbjct: 364 KYFSHLMMKRINVSTISGSTNIIEGSG 363

The following BLAST results are available for this feature:

BLAST of Pay0014830 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0014830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438ID00	1.9e-119	59.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5B4M9	1.9e-119	58.81	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015758 PE=4 SV=1	[more]
A5AJ43	2.5e-119	58.81	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006175 PE=4 SV=1	[more]
A5C0A9	3.1e-117	58.35	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_035070 PE=4 SV=1	[more]
A0A2N9I863	4.3e-111	62.35	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4793...	[more]

BLAST of Pay0014830 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW94544.1	4.0e-119	59.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN60947.1	4.0e-119	58.81	hypothetical protein VITISV_015758 [Vitis vinifera]	[more]
CAN77974.1	5.2e-119	58.81	hypothetical protein VITISV_006175 [Vitis vinifera]	[more]
CAN66208.1	6.4e-117	58.35	hypothetical protein VITISV_035070 [Vitis vinifera]	[more]
XP_021716055.1	1.2e-112	57.88	uncharacterized protein LOC110683932 [Chenopodium quinoa]	[more]

BLAST of Pay0014830 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	4.10.60.10		coord: 244..305 e-value: 5.1E-5 score: 25.0
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 69..161 e-value: 2.9E-7 score: 30.4
None	No IPR available	PANTHER	PTHR33325	ZINC FINGER, CCHC-TYPE-RELATED	coord: 24..305
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 268..282 score: 9.356029
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 248..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014830.1	Pay0014830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding