Pay0014620 (gene) Melon (Payzawat) v1

Overview
NamePay0014620
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPPM-type phosphatase domain-containing protein
Locationchr01: 36045970 .. 36048216 (-)
RNA-Seq ExpressionPay0014620
SyntenyPay0014620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCATTGGACAATGGACGTGGTAATCTTGAGTTTTTGTGGGGTTCTGGATTAGATGAGGATCGTAGAACTGCAATTGAAGATGGCATCACCATATGGTTATATTTCCAGTTGGATGGAAAGATGATGGGTTGGTGGAGGAAGATTCTCAGCTGGTTCATTATTTTGGCTGGCTTGATGGGGACGGAGGTTTTAGGTACGTCTTTTGGTTATCTATAATGACTTAACCCAGATTAACTCAATAATACAACGTCTTTTGAGGCGGTTGATCACAATGAGTTAACACAGATTCATTACTTTATGAGTATTTAAGGGGCTTCCCTTCATATCAGAAAATTTCAAATTGTATTATTGTTTGTTGACCATGAAATAAGATCCTTAGAAGAGGAGATACTCTTTTTTCCCATTCCTTAGTTTGGCTAATGACGAGGAGACGTTGCCAAACCATTTAAAGATGGTTTTCACCTTGGTTCTACTTCAATTAAAATAATTACACTCATTCTTTATGCATTGAAGCTGTTCCCAATGAAAGATAGCATTGTTCTAACCTGTGGCCATTCCTGCTTTGATACCGTTTAAATACAAAGTATAAATGATGTATTTTGTTGGTGAGTTTAGGAAGGGGGTTCCAATTAGAAACCTAGTTTGGAGCATCCATATACACACACACATATACATATATTTTGGGTACAACAACTGTGGGTTGGGGATCATACCTCCCGCCTCAAGGATAGAAGATCATATCAAGTACTGTTGAGCTATGCTTCCTTTGATTTATCCATATATTTGATATGGAGTTTGGGCATATGATTGCTAAATATATGATCGATCTATTTTTTAATGATGGTTTTGGGTGAGTACGCATTGTTCAATGAACTTCCATGAATTATTAGAAAAAGAGTGGATTAGAGGGGTTCTGACATTTGTCAGAATGGGCAGCGGGAAATGGCATTTAGAAAGTCTCATGGGAGGTTTGATGATGCCTTCTACTCCGTTAGATCTACAGGTTTGGTTCTTCTCTCAGCTTGCCAGATAATTGTTGCCAACCATGGTGACTCGAGCATTGCTTTGTTGTCGGAGTCAAACCAGCACTTGACGGCTGACCACAAAGTTCAATTATAATTCTTTATCTGTTCTGTTTTATGTTTCTGAAATGTTATAGTTGGCCACGCTTTAATAATTTGACTTCATTGTTAGATAAAAATTTCAATTATGCGAGACCATATGCAGTAAATCATTAATCATCAGTCTTTTAGTTCTCCCATTGTCTCTTCTGAGGAATGGATAAGATGTTGCAGTCAGATTCTAGATTATGGATGCTGATGATGCCTTTGTAGGGATCGTTGTGTTTACCCTTTACGATGTGTTTTATTTTGTATAAATCTGTTGACATGTGTTTTCTATCCTTGACAATCTCTTGTGCAATTGAGTTATAGGCTCATTTCTGAAATTGGTAGGTGAGAGTAATATCTGAAGCTTTGGAAGGATTGAATTGTATACAAACTGGTTATATCTGTTGTTGATTGTGTAGTTACTAAACCATGAAGATTCTTGATTTTGTGTCCTATTGCAGATTATGGTTGTCAGACGCTTTATTGCTGTTGTGCCTTGTTTTAAGTATGTATGCTTTGTAATCTTTGTATTCAAATTAAGTAAAGACCAGTCATATGTATGATTTGGGTGCACAAATTTGCCCAATCTTTTTAGCTAATATTAAGGCTCTCGTATTTTCCACTTTCTGATGCATATCAGTAGGCTAGATGAATATGATAGACTTGCAAGGGAAAAGCGAGAATTTTGTTTGTTGGCTGCCCTAGGGTCGAAAGGAGGGCTGATTATGACCAGAGCAATAAGTTGTTTCTGACCCATAGCATCATATTATGCTATCTAATTATAACTAGTTATGGTTCTATTGATTTCCTGACACTCATTACTTTGAAGAGTCAAGTTAATAATGATTCTAGTTATCATCGAGCAAGTTTTGCAAGCTTCTGATAAAGAACATTTATACTAGCTGGGAAGAAATATGCTATGTTGCCCTGTGATTCCAAGTTTTATTACGATTATAATTAGTTCGAGGTTATGTTCTTGTTTAACAAAATCATTGTTCACTAAGCTAGTCTTCCTTGACTCATTTAGTTTCTGTCACCATTATCTAATTTTGGAATTACCTCCTTTTATTTTAGCTACTCCACTCCATACTGTTCTAATTTCGAGTATGTTTCTGCATCAGGTGATCATTAG

mRNA sequence

ATGAGTGCATTGGACAATGGACGTGGTAATCTTGAGTTTTTGTGGGGTTCTGGATTAGATGAGGATCGTAGAACTGCAATTGAAGATGGCATCACCATATGGTTATATTTCCAGTTGGATGGAAAGATGATGGGTTGGTGGAGGAAGATTCTCAGCTGGTTCATTATTTTGGCTGGCTTGATGGGGACGGAGGTTTTAGGTGATCATTAG

Coding sequence (CDS)

ATGAGTGCATTGGACAATGGACGTGGTAATCTTGAGTTTTTGTGGGGTTCTGGATTAGATGAGGATCGTAGAACTGCAATTGAAGATGGCATCACCATATGGTTATATTTCCAGTTGGATGGAAAGATGATGGGTTGGTGGAGGAAGATTCTCAGCTGGTTCATTATTTTGGCTGGCTTGATGGGGACGGAGGTTTTAGGTGATCATTAG

Protein sequence

MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGLMGTEVLGDH
Homology
[Close]
BLAST of Pay0014620 vs. ExPASy TrEMBL
Match: A0A5D3C0G3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00310 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.8e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGL 60
          MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGL
Sbjct: 1  MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGL 60

Query: 61 MGTEVL 67
          MGTEVL
Sbjct: 61 MGTEVL 66

[Close]
BLAST of Pay0014620 vs. ExPASy TrEMBL
Match: A0A0A0K7Z8 (PPM-type phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452870 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.4e-09
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 35 LYFQLDGKMMGWWRKILSWFIILAGLMGTEVLG 68
          LYF+LDGKMMGWWRKI SWFIILAGLMGTEV G
Sbjct: 7  LYFKLDGKMMGWWRKIFSWFIILAGLMGTEVFG 39

[Close]
BLAST of Pay0014620 vs. NCBI nr
Match: KAA0051044.1 (hypothetical protein E6C27_scaffold481G00220 [Cucumis melo var. makuwa] >TYK03839.1 hypothetical protein E5676_scaffold347G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 7.9e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGL 60
          MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGL
Sbjct: 1  MSALDNGRGNLEFLWGSGLDEDRRTAIEDGITIWLYFQLDGKMMGWWRKILSWFIILAGL 60

Query: 61 MGTEVL 67
          MGTEVL
Sbjct: 61 MGTEVL 66

[Close]
BLAST of Pay0014620 vs. NCBI nr
Match: KAE8646533.1 (hypothetical protein Csa_016286 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 35 LYFQLDGKMMGWWRKILSWFIILAGLMGTEVLG 68
          LYF+LDGKMMGWWRKI SWFIILAGLMGTEV G
Sbjct: 7  LYFKLDGKMMGWWRKIFSWFIILAGLMGTEVFG 39

The following BLAST results are available for this feature:
BLAST of Pay0014620 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0014620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C0G33.8e-31100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K7Z85.4e-0990.91PPM-type phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa... [more]
BLAST of Pay0014620 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051044.17.9e-31100.00hypothetical protein E6C27_scaffold481G00220 [Cucumis melo var. makuwa] >TYK0383... [more]
KAE8646533.11.1e-0890.91hypothetical protein Csa_016286 [Cucumis sativus][more]
BLAST of Pay0014620 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0014620.1Pay0014620.1mRNA