Pay0014559 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014559
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	replication factor C subunit 4
Location	chr07: 9860513 .. 9866205 (-)
RNA-Seq Expression	Pay0014559
Synteny	Pay0014559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGCTCCGTTAAGAAATTAGAAAAATGATGAAAAATTGAAGCTAATCCTCTCTCCGACTGAACGCGGGAAAAAAAGTATAAACCCTATTTCCGGTGCCGAGGAGAGTGGATCAGCGGGAGAAGAAATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAAAAATAGTACGTTTCCCTTTTCCTTCCTTTCAATTCACTTGTTTCTCAGAATCTGTTGCATTATCTCAACCGTTGTTCATTTTTCCGATTGATAGTCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAGGTGGTTCGGGTCCTCACCAACACTCTCGAGACTGCCAGTGTACTTATTATCATTGATATCTCTCTCTCTCTCTTTTTTAATGGTGTTTGTAATAATCTTTGCAACTTGGTGTTGATTTTCTATTCAATTGTTGGTTGAATAGTGTCCACATATGCTGTTCTATGGACCGCCTGGTACTGGAAAAACCACCACTGCTCTTGCGATTTCCCATCAATTATTCGGGTTCGTTTTTACCTCTGTCTGGTTTATATATTTCTATTTGTGCTTCTTTTGTTCCTGTTGTCTTTTTGGAAGATGTGAATTTGTGTTTGGTAGTTCAGAATCCATTATAAGAAATAGCTTGGAATCTTTCCGTTGTGGGAGTTGATTGGTTTTGAGGAGGTTTTAATTTTATGAATTTTTATTTTATTTTAATTTTCTTTATTCTGTGATTGGGGTGGGTGTTGAGGATCCCAAACTTGAAAAATTGAATGATCTTGAACTCTTAATAAGATAGATGAATTACTCCTCTCATTTTATTATCAATTGATTTTGAGATGGAACCTTCCATGGGATACAACGATACAACAGTATCTAAACAAATAGGATATAAATACATTGGGGATACATTTTTTTCATTAAATTCTTCTAGGCTATGTGTGTGCGTGCATGTGACGTTGTGGGGGCTCATGCATCAAGTTGAATATTAGATGATTCTAAGGTTCATGTTTTTACTTCTTTTTCCCATATTTTTATTATGTGTTGGGGCAATGAGCTTTTAGATAGGCTGCGTAGTTCTTAGTTGAGGAAGATTAGATGAGTTTCATTTTTTTAAAGGTCCAACATGAATAGATGTGCCAAATCTTATGTCAAGGCATATTGGTATCTGATATGAATCCGATACTGATTGTCTACCTCAGTTGAAGTCTCCATGCTTCATGGACCTGTGTTATCTGATTAGTGAAGAGGTTAGATGCATCATACATGAAACTATAAATCAATCATGACCTCACTATCATTATGGTTAAATGGTGTTATCGAGATTCTGGGTGGTTTTTGCTCAAGAACATGATTTGCTTATTTCATAATGAAACCATTCAATCTAATTGGCTTAATTTGTATTAAACATGAAATAGACAAAATCAAATGTCGTTTTAGTTTTTATTTGATACACAAAATATTTGATTGAAGAAGTATTATTTGCAGTCCTGAACTTTACAAGTCTAGAGTTTTGGAGTTGAATGCAAGTGATGACCGCGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGTACTTTTCTTAATCATATCTATAACATTTTCATAAGATTCCTGTTATGAGCTTCACACTTCTTACGAAAGAAAATAACTCCAGGGGTTATCCTTGTCCACCCTTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGGTGTGACACAATGTAGATATAATTTCTTTTTTTAGTTATGTGAGTTAAAACTTTTTTTCTCTTCCTTATATTAAACTTATGTAGAATGCCTTGAGGCGTACCATGGAAACACACTCCAAAGTGACACGATTCTTTTTTATTTGCAACTATATCAGCAGGTAAAGCATAGCTTCCTTTTATTGTGTTAAATTTCTCACTATATTGTTGTAAAATTTTCTTTTCTTTTTTCTTGTTTGGTTGATGTTTGCGGTCTCCGATTTACTGTTGTTGCGTTTTTTTTTTGGATTTTTGCTTTTGATACTTATGACAGTCTCCAACCTTTTGTAGCGCAAATTAATAATCATAGCGCATATGATGTTTGCAATTGCAAGCCATTTATGGAAAACAAGATTGGAAGGGTTGATCGTAATTTTCTTCCGGTTAAATAATTGAGAAAGAGAAAGGGTATGCGGATCAGATCTTTGAAAACAATGGTTGTATCACCATTATGGTCCGCAGATTAGTTATTAACTAGACCACAATTTAATTGTCAAAAAAAGGTAAATTCGCAAAGACTATGGTAGCCTAATGTTTTTTAAAGCGCAAGAGTCTTCTAAGGCTTAAGCGCAAGACACGTTGAAGCGCAATAGTATTTTGGGCTCAAGTGCAAAACCAAAAAAAATAAGAAAACGTAGGTTTTTTCTTTTCAGAGGCATATTGCATTTAGGTTTAGTAAATTCGATTTTTCTTAGTTGTTATTGGAGGAAAAATCTCAATGACTTCTATTTCTGAAAATAATAAGAAAGCCCCAAGGCATGGCTTTGAGTCTTGGGGCTTCACAAACGGCACATGAGGCGTGCCTTATTTTGTGAGCCTAAAGGCAAGGCACCCGACCTGCGGCTTGAGCCTCATTGCATGCTGGGGAGGCCTTTTAAAACAGTGTGGGAGTCTGTTTGATCTTTGATAAAATTTGTGAATGAGCAGGAGCATGATTATAATGAAGCAGTTGCTACTTAATTTTCGTGAAATTTGGACGTTCTCGATTTCGTATATTCATTTTTTTTATGGAGGCATGGGCATTATTGTAGATATTTCGCAACATTTGTACAAATTACGAAAATTTTGTATCAATTTGTCTTGTGCCTTCTACATGGTTCACAATCATTTGACTTCGTTATAGAATACTGGAAACTGGTTTCTTTATGTTCTTGATTTTTACAATGGTCTATTTTACTTGGTCTTGACACGGTGCTAGCATGGGGATACCATTGTCTTAGTTTCTTTTCCCCTCATCTCTGCAGGATTATAGAGCCCCTTGCATCTAGGTGTGCAAAGTTTAGGTTTAAGCCACTTTCTGAAGAGGTTATGAGTAAGCGTATATTGCACATCAGCAATGAAGAAGGTCTTAGTCTAGACGGAGAGGTTAGCTCTTTGTTGCCAAGTATTAGAAATTGTGGTTTGAAATAAGCCATTTGGCATGACTAATATGATGTAAACTTATAATCTGTATAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTCCGTCGAGCTATCACATATTTACAGGTATGATTCAAATGCAACACTGCTATTCTCCATCATGTTAAACATGCTCAGATTAGGAATCATCACATTATTATTATTATTATTTTCAGTTGACAATGTTTCAAACATGATTAGGAGCTTGGATGATTAACGGGAAACATCTTCTACTATAATTAGTCAAAGTTCAATTTTGTTGGGGTGACATGATATTAGCCTTTAGGTTATCAATTATTCTAATTTATCATTGCATGCCCTGCATAATTGACCTTTCTGTTGGGAATTGTTGACCATCCTTTGCTTTTGCGTACTTGAAATTTCTTTCTTGCATACTTGGCTTTCAATGCGAATGCATGTGATGTAGAAAGAGTACACGTGATTGTAGCAACTATTGATATGTCCTTGCAGTTCCTTTGCCAATGTCTGTTTACTGAAAAAAATGTACTTTAGAATTTAGGGTTATGGCCTCCATAGTGGTTGCAGTTAGGCAAGGAGTTAAGGACTAGAAAAGAAAAAACCTTGGTTCTTACACTGGTTGGAACTTGGAACTGCAAACAATTTTCAGGTTAAAATTTTATAACCAACAATGGAATCATACGTGAGTCTAACTTCGAGATTCCTCTTAATGTAAATGAATGATGCCCTTAAGTGCTTCTGTTGTGTTAATACAAAATGTCTGATTATGGGAGAATGGGATTGGTAATAAACCCAATTGCTCATTGCTTATTTTCTAACTGCTTTATCTTTTCTTTTTCCTCCAGTCAGCTGCACGCTTATTTGGATCATCAATCTCTTCAAAGGATTTGGTTAACGTGTCTGGGGTGAGTAATGTGAATTTTGATGAGTCATTATCATTTCTAGGATTCTAAGTACAAATATTTAGAAATGGTTATGCTTACTAATGGTTCACTTTGGTCCCATTCTCGCCTCAGCAACACTGCCCTTCCCTTGAATTCATGTTCCAAAACAAAACTACTTGGAGTGATTATAACTGCGCAAAATGCTATCTGTTGTTTTTCTTTTTCTCTTCGGATGGTTGAATTTAACTAGATGATGTTTCATATTTTTTGTATTGTAAGAGTTTAGAGTGTCCTGTTTTCTGCCATTAATTGTCACAATGATCGATTATAAGGGGTTTTTAGTAATTTAATAGTGCATGGTTTCTATTTGTTCTCAATCTCAATAGTATGATCAATAACCTGCTCGAGAGATATAATAATGCACAGAATTTTCTTGTGTAATTATATTAATGTGATGTACTATCTAATTCTTTTCATTTGTAGATTATCCCTCGGGAGGTTGTTGATGCACTTTTTACTGCTTGTAAAAGTGGTAACTTCGATACTGCAAACAAGGAAGTCAACAATGTACTTGCAGAAGGATATCCAGTGGCTCAAATGCTTTCACAGGTTTTATTATTGCTCATAATGTCGTATTTTTAATGAATGAATGGAGATATGTGAAACTTCGATGTTTCCTACAGATATTTGAAGTGGTGATTGAAGACAATGATTTGCAAGATGAGCAGAAGGCCAGGATATGCAAGAAGTTGGCCGAAGCTGACAAGGTTTGTTGTATCTATATTTCTATGTTCAATTGTTCCAATATACATCTATATATAGATAGATATACACATATATATAGATATATATATTTCCATGTTCATTTGCGTTTTTGCTCTCTAAAGTTAATGTGAATCATCATCAGGTTGCACATATATTATTAGTTTTAGTCAGTAATTTGGAGTGTACAACATTGAATTAATAGATTCTCTCAATCTATTATGTATTTAGAACATGCAACTTAGTTACTTTCTTGCAAATATTGGTCATTCTATAAGGAATTTTTTCCAACGTCAACTAATTGACACAAATTTGACAACAGACATTACCATTTAATTTATTTCTTTTTTCATGAAATATATAAATGGGTTCTGATAATGGGATTTGTTGATATGTTTACCAGTTTATGTTCTTGTCTTGTATTAGACAACCTCTTTGTAGTGCATTGAAGATTTAATGTTAGATTACATATTAGACTTGGAATTGGTTATTCACTTACTTAATCCAAACCATCATTGTTGTGAAATCAAACTGCAGTGTCTCGTTGATGGTGCGGATGAATATTTGCAACTGCTCGATGTGGTAAGTCAAACAATGCAAGCTTTAAGAAGTATGCAACTGTAGATCTTGATTAAACTCGGGCGGTTTTGGTATCGGATATATCTAACGTATGCCATTTAGTATATAGATAAAATGTAACTTTTGACTTGTACAAATTGTTTTAGAATTGTATTGTTTGTAGCCGCTGAATTGATATGCTCAATCTTGTTTATTTAATCCATCATTTTCTTATGGTTTCTTCAACATTTCCTTATTATTTTATTCAATTTTTGAGAAAG

mRNA sequence

GTTTGCTCCGTTAAGAAATTAGAAAAATGATGAAAAATTGAAGCTAATCCTCTCTCCGACTGAACGCGGGAAAAAAAGTATAAACCCTATTTCCGGTGCCGAGGAGAGTGGATCAGCGGGAGAAGAAATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAAAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAGGTGGTTCGGGTCCTCACCAACACTCTCGAGACTGCCAGTTGTCCACATATGCTGTTCTATGGACCGCCTGGTACTGGAAAAACCACCACTGCTCTTGCGATTTCCCATCAATTATTCGGTCCTGAACTTTACAAGTCTAGAGTTTTGGAGTTGAATGCAAGTGATGACCGCGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGGGTTATCCTTGTCCACCCTTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCTTGAGGCGTACCATGGAAACACACTCCAAAGTGACACGATTCTTTTTTATTTGCAACTATATCAGCAGGATTATAGAGCCCCTTGCATCTAGGTGTGCAAAGTTTAGGTTTAAGCCACTTTCTGAAGAGGTTATGAGTAAGCGTATATTGCACATCAGCAATGAAGAAGGTCTTAGTCTAGACGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTCCGTCGAGCTATCACATATTTACAGTCAGCTGCACGCTTATTTGGATCATCAATCTCTTCAAAGGATTTGGTTAACGTGTCTGGGATTATCCCTCGGGAGGTTGTTGATGCACTTTTTACTGCTTGTAAAAGTGGTAACTTCGATACTGCAAACAAGGAAGTCAACAATGTACTTGCAGAAGGATATCCAGTGGCTCAAATGCTTTCACAGATATTTGAAGTGGTGATTGAAGACAATGATTTGCAAGATGAGCAGAAGGCCAGGATATGCAAGAAGTTGGCCGAAGCTGACAAGTGTCTCGTTGATGGTGCGGATGAATATTTGCAACTGCTCGATGTGGTAAGTCAAACAATGCAAGCTTTAAGAAGTATGCAACTGTAGATCTTGATTAAACTCGGGCGGTTTTGGTATCGGATATATCTAACGTATGCCATTTAGTATATAGATAAAATGTAACTTTTGACTTGTACAAATTGTTTTAGAATTGTATTGTTTGTAGCCGCTGAATTGATATGCTCAATCTTGTTTATTTAATCCATCATTTTCTTATGGTTTCTTCAACATTTCCTTATTATTTTATTCAATTTTTGAGAAAG

Coding sequence (CDS)

ATGGCGCCATTGTTGCAGAGCTCTCAACCATGGGTGGAAAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAGGTGGTTCGGGTCCTCACCAACACTCTCGAGACTGCCAGTTGTCCACATATGCTGTTCTATGGACCGCCTGGTACTGGAAAAACCACCACTGCTCTTGCGATTTCCCATCAATTATTCGGTCCTGAACTTTACAAGTCTAGAGTTTTGGAGTTGAATGCAAGTGATGACCGCGGGATCAATGTTGTTCGGACTAAGATTAAAGATTTTGCTGGTGTTGCAGTAAGCAGTGGCCAACGCCAAGGGGGTTATCCTTGTCCACCCTTCAAGATAATCATTCTGGATGAGGCTGATTCAATGACTGAAGATGCTCAGAATGCCTTGAGGCGTACCATGGAAACACACTCCAAAGTGACACGATTCTTTTTTATTTGCAACTATATCAGCAGGATTATAGAGCCCCTTGCATCTAGGTGTGCAAAGTTTAGGTTTAAGCCACTTTCTGAAGAGGTTATGAGTAAGCGTATATTGCACATCAGCAATGAAGAAGGTCTTAGTCTAGACGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTCCGTCGAGCTATCACATATTTACAGTCAGCTGCACGCTTATTTGGATCATCAATCTCTTCAAAGGATTTGGTTAACGTGTCTGGGATTATCCCTCGGGAGGTTGTTGATGCACTTTTTACTGCTTGTAAAAGTGGTAACTTCGATACTGCAAACAAGGAAGTCAACAATGTACTTGCAGAAGGATATCCAGTGGCTCAAATGCTTTCACAGATATTTGAAGTGGTGATTGAAGACAATGATTTGCAAGATGAGCAGAAGGCCAGGATATGCAAGAAGTTGGCCGAAGCTGACAAGTGTCTCGTTGATGGTGCGGATGAATATTTGCAACTGCTCGATGTGGTAAGTCAAACAATGCAAGCTTTAAGAAGTATGCAACTGTAG

Protein sequence

MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL

Homology

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BLAST of Pay0014559 vs. ExPASy Swiss-Prot
Match: Q93ZX1 (Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 7.8e-159
Identity = 282/335 (84.18%), Postives = 308/335 (91.94%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
            RILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARI 300
           P EVV+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL  M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Pay0014559 vs. ExPASy Swiss-Prot
Match: Q9FXM3 (Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 3.1e-155
Identity = 273/334 (81.74%), Postives = 305/334 (91.32%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPL+ SSQPWVEKYRP+QVKDVAHQ+EVVRVLT TL+TA  PHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI++QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  R+GGYPCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RKGGYPCPPYKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
            RILHI NEEGLSLD +AL+TLS+IS GDLRRAITYLQSAARLFGSSISS DL++VSG I
Sbjct: 181 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAI 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           P +VV +L  +CKSG FD ANKEVNN++A+GYPV+Q++SQ  +V++  +D+ DEQKARIC
Sbjct: 241 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM 335
           KKL EADKCLVDGADEYLQLLDV S+T++AL  M
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333

[Close]

BLAST of Pay0014559 vs. ExPASy Swiss-Prot
Match: Q99J62 (Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.7e-103
Identity = 186/323 (57.59%), Postives = 244/323 (75.54%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGP 69
           PWVEKYRPK V +VA QDEVV VL  +LE A  P++LFYGPPGTGKT+T LA + +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I+ +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEK 218

Query: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLV-NVSGIIPREVVDAL 249
           E + +  E ++ L  IS+GDLR+AIT+LQSA RL G    S+D++ +++G+IP   +D +
Sbjct: 219 ENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGI 278

Query: 250 FTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADK 309
           FTAC SG+FD     V N++ EG+   Q+++Q+ + +IE+ +L D+ K+ I +KLAE DK
Sbjct: 279 FTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQAL 332
           CL DGADE+LQL+ + +  MQ L
Sbjct: 339 CLADGADEHLQLMSLCATVMQQL 360

[Close]

BLAST of Pay0014559 vs. ExPASy Swiss-Prot
Match: P35249 (Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2)

HSP 1 Score: 373.6 bits (958), Expect = 2.3e-102
Identity = 186/323 (57.59%), Postives = 246/323 (76.16%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGP 69
           PWVEKYRPK V +VA Q+EVV VL  +LE A  P++LFYGPPGTGKT+T LA + +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I+ +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKK 218

Query: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSAARLF-GSSISSKDLVNVSGIIPREVVDAL 249
           E + +  E ++ L  +S+GDLR+AIT+LQSA RL  G  I+ K + +++G+IP E +D +
Sbjct: 219 ENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGV 278

Query: 250 FTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADK 309
           F AC+SG+FD     V +++ EG+   Q+++Q+ +VV+E N+L D+QK+ I +KLAE DK
Sbjct: 279 FAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVVE-NNLSDKQKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQAL 332
           CL DGADE+LQL+ + +  MQ L
Sbjct: 339 CLADGADEHLQLISLCATVMQQL 359

[Close]

BLAST of Pay0014559 vs. ExPASy Swiss-Prot
Match: Q54MD4 (Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.6e-95
Identity = 170/328 (51.83%), Postives = 230/328 (70.12%), Query Frame = 0


Query: 6   QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQ 65
           + ++PWV KYRPK V DV++Q++V+  L  +L T + PH+LFYGPPGTGKT+T LAI+  
Sbjct: 7   KDTEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMD 66

Query: 66  LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEAD 125
           ++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV+        P   FK+IILDEAD
Sbjct: 67  IYGPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEAD 126

Query: 126 SMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILH 185
           SMT DAQ ALRRT+ET SK TRF  +CNYISRII+PLASRCAKFRFKPL      +R+  
Sbjct: 127 SMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKF 186

Query: 186 ISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREVV 245
           IS +EG+  +      +  +S GD+R+AITYLQSA R F + IS   + N++G +P +++
Sbjct: 187 ISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSAFRFFANKISEDVIYNIAGSLPPQLI 246

Query: 246 DALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAE 305
             L   CK  +FD     V +++A+GYPV+Q++SQ+F+ V+   DL   QK+ I  K+  
Sbjct: 247 KQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTTKDLNQSQKSHITMKIGN 306

Query: 306 ADKCLVDGADEYLQLLDVVSQTMQALRS 334
            D+ L+DG++E+LQL D+ S  M+ L +
Sbjct: 307 VDRNLIDGSEEFLQLFDLSSYIMKQLNN 334

[Close]

BLAST of Pay0014559 vs. ExPASy TrEMBL
Match: A0A1S3B9T6 (LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=LOC103487609 PE=3 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.3e-184
Identity = 334/336 (99.40%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFXFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC
Sbjct: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 336

[Close]

BLAST of Pay0014559 vs. ExPASy TrEMBL
Match: A0A0A0KYI8 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.2e-181
Identity = 328/336 (97.62%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           P+EVVDALF ACKSGNFDTANK+VNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC
Sbjct: 241 PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQ LRS+QL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQVLRSIQL 336

[Close]

BLAST of Pay0014559 vs. ExPASy TrEMBL
Match: A0A6J1IVB8 (replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.9e-176
Identity = 321/337 (95.25%), Postives = 329/337 (97.63%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDL++VSGII
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVD LF ACKSGNFD ANKEVNNV+AEGYPVAQMLSQIFEVVIE +DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-RSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL  SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Pay0014559 vs. ExPASy TrEMBL
Match: A0A5D3BRF2 (Replication factor C subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00030 PE=3 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.2e-175
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 16  RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSR 75
           RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSR
Sbjct: 36  RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSR 95

Query: 76  VLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNAL 135
           VLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNAL
Sbjct: 96  VLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNAL 155

Query: 136 RRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLD 195
           RRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLD
Sbjct: 156 RRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHISNEEGLSLD 215

Query: 196 GEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREVVDALFTACKSG 255
           GEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREVVDALFTACKSG
Sbjct: 216 GEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGIIPREVVDALFTACKSG 275

Query: 256 NFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGAD 315
           NFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGAD
Sbjct: 276 NFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGAD 335

Query: 316 EYLQLLDVVSQTMQALRSMQL 337
           EYLQLLDVVSQTMQALRSMQL
Sbjct: 336 EYLQLLDVVSQTMQALRSMQL 356

[Close]

BLAST of Pay0014559 vs. ExPASy TrEMBL
Match: A0A6J1FIS1 (replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 4.7e-175
Identity = 319/337 (94.66%), Postives = 328/337 (97.33%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL++VSGII
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVD LF AC+SGNFD ANKEVNNV+AEGYPVAQMLSQIFEVVIE +DLQDEQ A+IC
Sbjct: 241 PREVVDELFAACRSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQTAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-RSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL  SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Pay0014559 vs. NCBI nr
Match: XP_008444196.1 (PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 4 [Cucumis melo])

HSP 1 Score: 653.7 bits (1685), Expect = 8.8e-184
Identity = 334/336 (99.40%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFXFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC
Sbjct: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 336

[Close]

BLAST of Pay0014559 vs. NCBI nr
Match: XP_038897028.1 (replication factor C subunit 4 [Benincasa hispida])

HSP 1 Score: 649.0 bits (1673), Expect = 2.2e-182
Identity = 331/336 (98.51%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLV+VSGII
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVSVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVDALF+ACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV+EDNDLQDEQKARIC
Sbjct: 241 PREVVDALFSACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVVEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL 336

[Close]

BLAST of Pay0014559 vs. NCBI nr
Match: XP_004142636.1 (replication factor C subunit 4 [Cucumis sativus] >KGN54543.1 hypothetical protein Csa_012818 [Cucumis sativus])

HSP 1 Score: 645.6 bits (1664), Expect = 2.4e-181
Identity = 328/336 (97.62%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           P+EVVDALF ACKSGNFDTANK+VNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC
Sbjct: 241 PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQ LRS+QL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQVLRSIQL 336

[Close]

BLAST of Pay0014559 vs. NCBI nr
Match: XP_023523758.1 (replication factor C subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 631.3 bits (1627), Expect = 4.7e-177
Identity = 323/337 (95.85%), Postives = 331/337 (98.22%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE+VMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEKVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL++VSGII
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVD LF ACKSGNFD ANKEVNNV+AEGYPVAQMLSQIFEVVIE +DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-RSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL  SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Pay0014559 vs. NCBI nr
Match: XP_022981026.1 (replication factor C subunit 4 [Cucurbita maxima])

HSP 1 Score: 628.2 bits (1619), Expect = 4.0e-176
Identity = 321/337 (95.25%), Postives = 329/337 (97.63%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
           KRILHISNEEGLSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDL++VSGII
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300
           PREVVD LF ACKSGNFD ANKEVNNV+AEGYPVAQMLSQIFEVVIE +DLQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQAL-RSMQL 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQAL  SMQL
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQL 337

[Close]

BLAST of Pay0014559 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 561.2 bits (1445), Expect = 5.5e-160
Identity = 282/335 (84.18%), Postives = 308/335 (91.94%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
            RILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARI 300
           P EVV+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL  M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Pay0014559 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 539.7 bits (1389), Expect = 1.7e-153
Identity = 275/335 (82.09%), Postives = 301/335 (89.85%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFG       VLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
            RILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARI 300
           P EVV+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL  M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 328

[Close]

BLAST of Pay0014559 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-151
Identity = 272/335 (81.19%), Postives = 297/335 (88.66%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EV            CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
            RILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARI 300
           P EVV+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQALRSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ AL  M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 323

[Close]

BLAST of Pay0014559 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 529.3 bits (1362), Expect = 2.3e-150
Identity = 263/309 (85.11%), Postives = 288/309 (93.20%), Query Frame = 0


Query: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60
           MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240
            RILHI NEEGLSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL+NVSG++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIE-DNDLQDEQKARI 300
           P EVV+ LFTACKSG+FD ANKEV+N++AEGYP +Q+++Q+F++V E D+D+ D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADK 309
           CK LAE DK
Sbjct: 301 CKCLAETDK 309

[Close]

BLAST of Pay0014559 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 195.7 bits (496), Expect = 6.1e-50
Identity = 117/331 (35.35%), Postives = 188/331 (56.80%), Query Frame = 0


Query: 3   PLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAI 62
           P    + PWVEKYRP+ + DVA   +++  +         PH+L YGPPGTGKT+T LA+
Sbjct: 33  PPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAV 92

Query: 63  SHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILD 122
           + +L+GP+ Y++ +LELNASDDRGI+VVR +I+DFA     S  +         K+++LD
Sbjct: 93  ARKLYGPK-YRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSS------VKLVLLD 152

Query: 123 EADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKR 182
           EAD+MT+DAQ ALRR +E ++K TRF  I N++++II  L SRC +FRF PL    MS+R
Sbjct: 153 EADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQR 212

Query: 183 ILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSA-------ARLFGSSISSKDLVN 242
           + H+   E L +    L+ L  +S GD+R+A+  LQS               I+ +D+  
Sbjct: 213 LKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYL 272

Query: 243 VSGIIPREVVDALFTACKSGNFDTANKEVNNV-LAEGYPVAQMLSQIFEVVIEDNDLQDE 302
            +G    + ++ +     +  FD   K+V+ +   +G  +  ++ +I  + I    +   
Sbjct: 273 CTGNPLPKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEI-TLFIFKIKMPSA 332

Query: 303 QKARICKKLAEADKCLVDGADEYLQLLDVVS 326
            + ++   LA+ +  L  G ++ LQL  ++S
Sbjct: 333 VRVQLINDLADIEYRLSFGCNDKLQLGAIIS 355

The following BLAST results are available for this feature:

BLAST of Pay0014559 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZX1	7.8e-159	84.18	Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1	[more]
Q9FXM3	3.1e-155	81.74	Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 ...	[more]
Q99J62	2.7e-103	57.59	Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1	[more]
P35249	2.3e-102	57.59	Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2	[more]
Q54MD4	3.6e-95	51.83	Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=...	[more]

BLAST of Pay0014559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9T6	4.3e-184	99.40	LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0KYI8	1.2e-181	97.62	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV...	[more]
A0A6J1IVB8	1.9e-176	95.25	replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 ...	[more]
A0A5D3BRF2	1.2e-175	99.69	Replication factor C subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1FIS1	4.7e-175	94.66	replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=...	[more]

BLAST of Pay0014559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444196.1	8.8e-184	99.40	PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 4 [Cucumis melo]	[more]
XP_038897028.1	2.2e-182	98.51	replication factor C subunit 4 [Benincasa hispida]	[more]
XP_004142636.1	2.4e-181	97.62	replication factor C subunit 4 [Cucumis sativus] >KGN54543.1 hypothetical protei...	[more]
XP_023523758.1	4.7e-177	95.85	replication factor C subunit 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022981026.1	4.0e-176	95.25	replication factor C subunit 4 [Cucurbita maxima]	[more]

BLAST of Pay0014559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21690.1	5.5e-160	84.18	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	1.7e-153	82.09	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	1.2e-151	81.19	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	2.3e-150	85.11	ATPase family associated with various cellular activities (AAA)	[more]
AT1G77470.1	6.1e-50	35.35	replication factor C subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 41..174 e-value: 6.1E-13 score: 59.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..173 e-value: 2.5E-54 score: 185.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..234
None	No IPR available	GENE3D	1.20.272.10		coord: 240..330 e-value: 7.4E-33 score: 114.7
None	No IPR available	GENE3D	1.10.8.60		coord: 176..239 e-value: 1.6E-15 score: 58.4
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 7..330
None	No IPR available	PANTHER	PTHR11669:SF20	REPLICATION FACTOR C SUBUNIT 4	coord: 7..330
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 174..236 e-value: 1.04984E-13 score: 63.3169
None	No IPR available	CDD	cd00009	AAA	coord: 26..166 e-value: 8.05218E-25 score: 96.0611
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 241..326 e-value: 4.9E-22 score: 78.2
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 45..172 e-value: 3.1E-16 score: 60.0
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 240..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014559.1	Pay0014559.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006508	proteolysis
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity