Pay0014501 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014501
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr12: 12891194 .. 12894443 (+)
RNA-Seq Expression	Pay0014501
Synteny	Pay0014501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATACCAAGATCGCCTTATCTCCTCATGGCTTCTAGGGTCTATGATGAAGAAATACTGAATCAGATGCTTCATTGCAAATCTGCAAAAGAAATTTGGGAAACTCTTCAAGGTATTTTCTCTTTCCGTTACTTGGCACAAGCTATGCAATTCAAAAATAAACTTCACAATATAAAGAAAAGATCCATGCCATTAAAAGAATACTTTCTCAAAATACAACAGTGTTTTGATGCCTTAGCTTCAATTAACAAACCAGTTTCATCTGATGATCATATTCTGTACATATTGGCTGGTTTAGGATCTGATTATCAATCCATGATATCTGTTATTTCTACTAGAACTGACTCTCCTTCTGTACAAGAAGTTATGACTTTATTATTTACTTAGGAATCTCAAAATGAGAGCAAATTTATCAGTGAAATTGATCTACCTTTTGTTAACATTGTCATCCAAACAACTGAAAAAGGAGCAGAATCTTACATAAGGACCAGCCAAAACAACTATCACAACAATCATTCCTACAATCAAAGGGGTGACCGTGGAAATGGAAGATCAAATAGGGGAGGAAGAGGAAATCTTAATAAGCCACAATGCCAAATCTGTACAAAGCTTGGACACAGTGCTGATCGCTGCTTCTTTCGATATACTCCAAGATCAAATTCATCAGGTTACTCACCAAACTCACATAATACTTCATACACTAATATGAATAATCATCCACAGATGTCTGCTACGGTGGCTTCCCCCGACCTGAATATTGACAGCAATTGGTATCCTGATTCGGGAGCTACAAATCATTTAACTTATAGCTTGAGCAACCTATCTACTAGATCTGAGTACGGGGGAGGAAATCAAATATATGTAGCAAATGGGTCAGGTTTGCCAACCACTCATTATGGTTCCATGTCATTTAACTCCTCTACATTACCATTCAAATTGTTTAGACTAAATAACTTGCTCCATGTTCCATCCATTACCAAAAACTTAATCAGTGTTTCACAATTTGTCAAAGATAATCATGTTTCTTTGAATTTCACCCCACTTTGTGTTATGTGAAGGATCTGGATACTGGCCAAGTACTTCTTCAAGGACTACTCAATGATAGGCTCTACAAATTTACCATCCAACCATCACATAAAGACTTCACCATTCTGACCCCAACACAAAGTCTGTTTTCAATACCGTTGTACCTAAATCTAATACTCACTTACTTGATCTATGGCATAGAAGACTAGGTCATTTCCATTTACCTATTGTTAAAGCTGTTTTGAAACACATTGACTATTCTTCTGGTACTATAAATAAACTGAATTTTTGTGAAGCATGTGCATTGGGCAAACATCATGCCCTTCCTTTCTCTCACTCCCTTACTCTTTATACACATCCTTTACTGCTTATTACTTTTGATTTATGGGGTCCTGCCGTAAATTTATCTCATAATGGTTTTAGATATTACATAAGTTTTGTTGATGCCTATAGTAGATACACCTGGATAGATTTCTTACATTCCAAGTTTGGTGCCTTTTTAGCCTTTCAAAAATTCAAAGCATGTGTTGAAAAGTCTCTTGGTCAATCAATTAAAAGTCTTCAAACTGATGGTGGTGCTGAATTTAAACCATTCAATCATTTTCTTGATCAACATGGCATTGAACATAGGATAACATGTCCTTACACTTCAAAGCAGAATGACATAGTTGAGAGAAAACATAGGCATATCATTGAAATGAGTCTTATTTTGTTATCTCAAGCCACTTTACCTCTATCATTCTGGGATGAAGCCTTCTCCACTAGTGTCTATCTCATAAATCGTTTGCCTACCCCAGTTCTTGATAATATAAGCCTGTTGGAGAAGCTATTTTGCCGGAAACCTAACTTTCCTTCTCTTAGGGTGTGTTTGGGAGAAGGAAAGAGTTATGGAGGAAAAGGGATTATAATAATCTAGGATTATGATAACTATGTGTTATGATAATATGTGTTTGAGAAATAGATTATTAATGGTAGTTTTATTGTAATATGTGTTTGGAGGAAAAAATATAAAAGGTAGTGTTATGATGGTATGTGTTTGGAGGAGGGATTATGCATAGTAGTGTTTATGATAATATGTGTTTGGAAAATTATGATTGTAGTAATTTAAAAAACAATAATAAATTTTTGATTTGATTGTTTGGGTAGGTAATGTAAGGTTGTAAAAAAGTAAAAATATGATAAGATAGGGTTATTTAGGGACTAGGATAACCCTAATCCCCCATTTATCATAATCCTTGGGCCAAACACGGTTTGGCCCAATTTCCTAATCCTTTTCCTCCTAAAACCCCACCCCAAACATACCCTTAGAGTTTTTGGCTGCAAGTGTTATCCCTACCTTCGATCGTATCAATCACATAAACTATCTCTCTGATCCTCATTATGTACTTTCCTAGGATACAGTACCTCCCATAAAGGGTACAAATGTCTAGCTTCAGATGGTTGCCTCTTTATTTCTAGACATGTATTATTTGATGAAAATTCATTTCCATATGCATCATTTGCATCTCATTCTAGCATACCCAAATCCAAAAATGTCCTATCTCCACCACTTCACTCAATAATTCCATCATCTCTTATGAACCATAATGAGGATAGGCGACACACTGTCACAGTTTCTGATAACACCGATCATCTAAATCTTACTATTGTGTATCTTTTAGAGATAGGTACTCAAGAGAGCTTTATGGGTGATGGTAACAGTGGATGTATTACTCAATCTCCAAGTCCTATGGAACCACAACATCAAACTGATTCTGGTATGAATACTCAACTTCAATCTACCTCTATTCATCCCATGATAACACGGAGTAAGCATGGTATTTTCAAACCAAAAGCATTCTTGATTGATTATACTCAGACTGAACCTTATAATGTCAAGGAAGCTTTTAACCATCCTCATTGGAAAAAGGCCATGGAAGAAGAGTTTGAAGCCTTACAGAAAAATGACACTTGGAGTCTTACTTCACAAAATCCTAATCAGAAAATTGTTGGTTGCAAATGGGTTTTTAAGATAAAAAGGAATTCATATAGGTCTATTGCTAGATATAAAGTACGCTTAGTTGCTAAAGAGTTTCATCAAACACCTAATATTGATTACCATGAAACATTTAGCCCTGTTGTGAAACCCGTTACTATTCGCATGCTCTTAACTATAGCAATTATGAAAGGATGGAGTATACGTCAATTAGATGTAATAATGCTTTTCTTCATGGAAATTTAG

mRNA sequence

ATGGAAATACCAAGATCGCCTTATCTCCTCATGGCTTCTAGGGTCTATGATGAAGAAATACTGAATCAGATGCTTCATTGCAAATCTGCAAAAGAAATTTGGGAAACTCTTCAAGAGATAGGTACTCAAGAGAGCTTTATGGGTGATGGTAACAGTGGATGTATTACTCAATCTCCAAGTCCTATGGAACCACAACATCAAACTGATTCTGGTATGAATACTCAACTTCAATCTACCTCTATTCATCCCATGATAACACGGAGTAAGCATGGTATTTTCAAACCAAAAGCATTCTTGATTGATTATACTCAGACTGAACCTTATAATGTCAAGGAAGCTTTTAACCATCCTCATTGGAAAAAGGCCATGGAAGAAGAGTTTGAAGCCTTACAGAAAAATGACACTTGGAGTCTTACTTCACAAAATCCTAATCAGAAAATTGTTGGTTGCAAATGGGTTTTTAAGATAAAAAGGAATTCATATAGGTCTATTGCTAGATATAAAGTACGCTTAGTTGCTAAAGAGTTTCATCAAACACCTAATATTGATTACCATGAAACATTTAGCCCTGTTGTGAAACCCGTTACTATTCGCATGCTCTTAACTATAGCAATTATGAAAGGATGGAGTATACGTCAATTAGATGTAATAATGCTTTTCTTCATGGAAATTTAG

Coding sequence (CDS)

ATGGAAATACCAAGATCGCCTTATCTCCTCATGGCTTCTAGGGTCTATGATGAAGAAATACTGAATCAGATGCTTCATTGCAAATCTGCAAAAGAAATTTGGGAAACTCTTCAAGAGATAGGTACTCAAGAGAGCTTTATGGGTGATGGTAACAGTGGATGTATTACTCAATCTCCAAGTCCTATGGAACCACAACATCAAACTGATTCTGGTATGAATACTCAACTTCAATCTACCTCTATTCATCCCATGATAACACGGAGTAAGCATGGTATTTTCAAACCAAAAGCATTCTTGATTGATTATACTCAGACTGAACCTTATAATGTCAAGGAAGCTTTTAACCATCCTCATTGGAAAAAGGCCATGGAAGAAGAGTTTGAAGCCTTACAGAAAAATGACACTTGGAGTCTTACTTCACAAAATCCTAATCAGAAAATTGTTGGTTGCAAATGGGTTTTTAAGATAAAAAGGAATTCATATAGGTCTATTGCTAGATATAAAGTACGCTTAGTTGCTAAAGAGTTTCATCAAACACCTAATATTGATTACCATGAAACATTTAGCCCTGTTGTGAAACCCGTTACTATTCGCATGCTCTTAACTATAGCAATTATGAAAGGATGGAGTATACGTCAATTAGATGTAATAATGCTTTTCTTCATGGAAATTTAG

Protein sequence

MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI

Homology

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BLAST of Pay0014501 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 73   NTQLQSTSIHPMITRSKHGIFKPK---AFLIDY-TQTEPYNVKEAFNHPHWKKAMEEEFE 132
            N      + H M TR+K GI KP    +  +    ++EP    +A     W+ AM  E  
Sbjct: 918  NNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEIN 977

Query: 133  ALQKNDTWSLTSQNPNQ-KIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHET 192
            A   N TW L    P+   IVGC+W+F  K NS  S+ RYK RLVAK ++Q P +DY ET
Sbjct: 978  AQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAET 1037

Query: 193  FSPVVKPVTIRMLLTIAIMKGWSIRQLDV 217
            FSPV+K  +IR++L +A+ + W IRQLDV
Sbjct: 1038 FSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1066

[Close]

BLAST of Pay0014501 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.9e-24
Identity = 68/163 (41.72%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 59   PSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYT----QTEPYNVKEAF 118
            P+P   Q    + +NT       H M TR+K GI KP       T     +EP    +A 
Sbjct: 894  PAPPIIQVNAQAPVNT-------HSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAM 953

Query: 119  NHPHWKKAMEEEFEALQKNDTWSLT-SQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVA 178
                W++AM  E  A   N TW L     P+  IVGC+W+F  K NS  S+ RYK RLVA
Sbjct: 954  KDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVA 1013

Query: 179  KEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDV 217
            K ++Q P +DY ETFSPV+K  +IR++L +A+ + W IRQLDV
Sbjct: 1014 KGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1049

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BLAST of Pay0014501 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.6e-22
Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 84  MITRSKHGIFK--PKAFLIDYT--QTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLT 143
           M+TRSK GI K  PK  L   T  + EP +V  A   P W +AM+EE +AL +N TW L 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 144 SQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRM 203
               NQ I+GCKWVFK K +S  ++ R K RLVAK FHQ   I + ET+SPVV+  TIR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 204 LLTIA 205
           +L +A
Sbjct: 121 ILNVA 125

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BLAST of Pay0014501 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 63  EPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHP---HW 122
           E +H T      Q    S  P +   +   +    +++     EP ++KE  +HP     
Sbjct: 770 EVEHPTQGEEQHQPLRRSERPRVESRR---YPSTEYVLISDDREPESLKEVLSHPEKNQL 829

Query: 123 KKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQT 182
            KAM+EE E+LQKN T+ L      ++ + CKWVFK+K++    + RYK RLV K F Q 
Sbjct: 830 MKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQK 889

Query: 183 PNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLF 221
             ID+ E FSPVVK  +IR +L++A      + QLDV   F
Sbjct: 890 KGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAF 927

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BLAST of Pay0014501 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 119  WKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQ 178
            W++A+  E  A + N+TW++T +  N+ IV  +WVF +K N   +  RYK RLVA+ F Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 179  TPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLF 221
               IDY ETF+PV +  + R +L++ I     + Q+DV   F
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAF 1007

[Close]

BLAST of Pay0014501 vs. ExPASy TrEMBL
Match: A0A1S4E3D4 (uncharacterized mitochondrial protein AtMg00820-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499934 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 3.9e-125
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPS 60
           MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPS
Sbjct: 1   MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPS 60

Query: 61  PMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWK 120
           PMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWK
Sbjct: 61  PMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWK 120

Query: 121 KAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTP 180
           KAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTP
Sbjct: 121 KAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTP 180

Query: 181 NIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI 225
           NIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI
Sbjct: 181 NIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI 224

[Close]

BLAST of Pay0014501 vs. ExPASy TrEMBL
Match: A0A1S3CEF5 (uncharacterized mitochondrial protein AtMg00820-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499934 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 38  QEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKA 97
           Q+IGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKA
Sbjct: 39  QKIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKA 98

Query: 98  FLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIK 157
           FLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIK
Sbjct: 99  FLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIK 158

Query: 158 RNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVI 217
           RNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVI
Sbjct: 159 RNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVI 218

Query: 218 MLFFMEI 225
           MLFFMEI
Sbjct: 219 MLFFMEI 225

[Close]

BLAST of Pay0014501 vs. ExPASy TrEMBL
Match: A0A5A7SW14 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002970 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 37  LQEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPK 96
           L EIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPK
Sbjct: 27  LLEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPK 86

Query: 97  AFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKI 156
           AFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKI
Sbjct: 87  AFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKI 146

Query: 157 KRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSI 212
           KRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSI
Sbjct: 147 KRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSI 201

[Close]

BLAST of Pay0014501 vs. ExPASy TrEMBL
Match: A0A5D3D5W0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001310 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.0e-81
Identity = 154/178 (86.52%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 39  EIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAF 98
           E GTQES   DGNSG ITQSPSPMEP HQTDSGMNTQLQSTSIHPMIT+SKH IFKPKAF
Sbjct: 175 ETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAF 234

Query: 99  LIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKR 158
           LIDYTQTE  N KEAFNHPHWKKAMEEEF+ALQKN TWSL  QNPNQKIVGCKWVFKIKR
Sbjct: 235 LIDYTQTETCNAKEAFNHPHWKKAMEEEFKALQKNGTWSLIPQNPNQKIVGCKWVFKIKR 294

Query: 159 NSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDV 217
           NSY SI+RYK RLVAK FHQT NIDY+ETFSPVVKP+TIRMLLTI IMKGWSI QLDV
Sbjct: 295 NSYGSISRYKARLVAKGFHQTHNIDYNETFSPVVKPITIRMLLTITIMKGWSIHQLDV 352

[Close]

BLAST of Pay0014501 vs. ExPASy TrEMBL
Match: A0A5A7VFQ6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00150 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 99/113 (87.61%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 39  EIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAF 98
           E GTQES   DGNSG ITQSPSPMEP HQTDSGMNTQLQSTSIHPMIT+SKH IFKPKAF
Sbjct: 437 ETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAF 496

Query: 99  LIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCK 152
           LIDYTQTE  N KEAFNHPHWKKAMEEEFEALQKN TWSL  QNPNQKIVGCK
Sbjct: 497 LIDYTQTETCNAKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIVGCK 549

[Close]

BLAST of Pay0014501 vs. NCBI nr
Match: XP_016902739.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X2 [Cucumis melo])

HSP 1 Score: 457.2 bits (1175), Expect = 8.0e-125
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPS 60
           MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPS
Sbjct: 1   MEIPRSPYLLMASRVYDEEILNQMLHCKSAKEIWETLQEIGTQESFMGDGNSGCITQSPS 60

Query: 61  PMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWK 120
           PMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWK
Sbjct: 61  PMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAFLIDYTQTEPYNVKEAFNHPHWK 120

Query: 121 KAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTP 180
           KAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTP
Sbjct: 121 KAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTP 180

Query: 181 NIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI 225
           NIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI
Sbjct: 181 NIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLFFMEI 224

[Close]

BLAST of Pay0014501 vs. NCBI nr
Match: XP_008461310.2 (PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X1 [Cucumis melo] >XP_016902737.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X1 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 9.6e-102
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 38  QEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKA 97
           Q+IGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKA
Sbjct: 39  QKIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKA 98

Query: 98  FLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIK 157
           FLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIK
Sbjct: 99  FLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIK 158

Query: 158 RNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVI 217
           RNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVI
Sbjct: 159 RNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVI 218

Query: 218 MLFFMEI 225
           MLFFMEI
Sbjct: 219 MLFFMEI 225

[Close]

BLAST of Pay0014501 vs. NCBI nr
Match: KAA0035484.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31041.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 359.4 bits (921), Expect = 2.3e-95
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 37  LQEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPK 96
           L EIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPK
Sbjct: 27  LLEIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPK 86

Query: 97  AFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKI 156
           AFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKI
Sbjct: 87  AFLIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKI 146

Query: 157 KRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSI 212
           KRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSI
Sbjct: 147 KRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSI 201

[Close]

BLAST of Pay0014501 vs. NCBI nr
Match: TYK18915.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 4.2e-81
Identity = 154/178 (86.52%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 39  EIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAF 98
           E GTQES   DGNSG ITQSPSPMEP HQTDSGMNTQLQSTSIHPMIT+SKH IFKPKAF
Sbjct: 175 ETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAF 234

Query: 99  LIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKR 158
           LIDYTQTE  N KEAFNHPHWKKAMEEEF+ALQKN TWSL  QNPNQKIVGCKWVFKIKR
Sbjct: 235 LIDYTQTETCNAKEAFNHPHWKKAMEEEFKALQKNGTWSLIPQNPNQKIVGCKWVFKIKR 294

Query: 159 NSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDV 217
           NSY SI+RYK RLVAK FHQT NIDY+ETFSPVVKP+TIRMLLTI IMKGWSI QLDV
Sbjct: 295 NSYGSISRYKARLVAKGFHQTHNIDYNETFSPVVKPITIRMLLTITIMKGWSIHQLDV 352

[Close]

BLAST of Pay0014501 vs. NCBI nr
Match: KAA0067212.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 3.6e-48
Identity = 99/113 (87.61%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 39  EIGTQESFMGDGNSGCITQSPSPMEPQHQTDSGMNTQLQSTSIHPMITRSKHGIFKPKAF 98
           E GTQES   DGNSG ITQSPSPMEP HQTDSGMNTQLQSTSIHPMIT+SKH IFKPKAF
Sbjct: 437 ETGTQESSRDDGNSGGITQSPSPMEPPHQTDSGMNTQLQSTSIHPMITQSKHDIFKPKAF 496

Query: 99  LIDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCK 152
           LIDYTQTE  N KEAFNHPHWKKAMEEEFEALQKN TWSL  QNPNQKIVGCK
Sbjct: 497 LIDYTQTETCNAKEAFNHPHWKKAMEEEFEALQKNGTWSLIPQNPNQKIVGCK 549

[Close]

BLAST of Pay0014501 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-23
Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 84  MITRSKHGIFK--PKAFLIDYT--QTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLT 143
           M+TRSK GI K  PK  L   T  + EP +V  A   P W +AM+EE +AL +N TW L 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 144 SQNPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRM 203
               NQ I+GCKWVFK K +S  ++ R K RLVAK FHQ   I + ET+SPVV+  TIR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 204 LLTIA 205
           +L +A
Sbjct: 121 ILNVA 125

[Close]

BLAST of Pay0014501 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 106 EPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQNPNQKIVGCKWVFKIKRNSYRSIA 165
           EP    EA     W  AM++E  A++   TW + +  PN+K +GCKWV+KIK NS  +I 
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 166 RYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLLTIAIMKGWSIRQLDVIMLF 221
           RYK RLVAK + Q   ID+ ETFSPV K  +++++L I+ +  +++ QLD+   F
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199

The following BLAST results are available for this feature:

BLAST of Pay0014501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.2e-24	42.28	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.9e-24	41.72	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92520	4.6e-22	49.60	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	1.1e-18	36.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.6e-14	39.22	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Pay0014501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3D4	3.9e-125	100.00	uncharacterized mitochondrial protein AtMg00820-like isoform X2 OS=Cucumis melo ...	[more]
A0A1S3CEF5	4.6e-102	99.47	uncharacterized mitochondrial protein AtMg00820-like isoform X1 OS=Cucumis melo ...	[more]
A0A5A7SW14	1.1e-95	99.43	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3D5W0	2.0e-81	86.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VFQ6	1.7e-48	87.61	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]

BLAST of Pay0014501 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902739.1	8.0e-125	100.00	PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X2 [Cucu...	[more]
XP_008461310.2	9.6e-102	99.47	PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X1 [Cucu...	[more]
KAA0035484.1	2.3e-95	99.43	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31041.1 putative m...	[more]
TYK18915.1	4.2e-81	86.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0067212.1	3.6e-48	87.61	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]	[more]

BLAST of Pay0014501 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00820.1	3.2e-23	49.60	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	2.0e-20	42.61	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 133..220 e-value: 1.4E-21 score: 77.2
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 61..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014501.1	Pay0014501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding