Pay0014411 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014411
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	GAG1At protein
Location	chr01: 33973408 .. 33974701 (-)
RNA-Seq Expression	Pay0014411
Synteny	Pay0014411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGCGAGGCCAAAAGCGGGGGAGCGAGCGGTGGAGCAGGTGGTTTCAGATCGAGAATGGAGTACTATTTATACAGTGGCGATAAAAAGCACGTCGCCGCTGGCATCGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGGTTTTTGTTCTTTCCTTTACCAATTTTTGTTTTTTTTACTCTTATCTCCTATGATTGTTTGTTGCTTTTGAGAGAAATTGATGTGGGAAAACAACTTTTTTTTTTCCCGTGATTTGGAGAAGGGAGGGCTTTGAATATTGACGTATCGAGTGCACTAAGAAGATATTGATTCTTGAATGGAGTTCCTTTTTAAACTTATTAGTTTTTCTTGGGGAATTCAGCTAGCTTTTGATTGCAACAGTGGACATTGGGAAGTATGTTCGATTTTCCAATGTGTAATTTAGGGTTTCAGAATATTTGCAGCTTCAATAAGATATGCATATGCTTAGTCTTGTTGGCCTTTGGCACTGGGTGGATTAGGGTTTAGAATTTGTAGGTTCTGCTGGTTGGGTGCTCCTGTGATTTGGGAATGAGAAACGCTAGTCTATCAGGGTAATATCATTGTGGATTTTTATGATACTGATTTTTATTACTTCAAGAACTATTGGAACTGTATCTGATGGGTGTGCTCTAGAACAACATATTTCAGTGATTATGTCTTCATATACAAACACCTTACTCTTAGATTGTTGTCATGGTTGAAACTTGACTTGGTTTAGCTAAACTGAAGTTATTCTTTCTCATAAGATAAGATCATAGGCTCATAAATAGTGCCAACGTGACTACGTAAGCATAACTAAAGTATATATATCAATCAAGTGATTACATGTTCAAACTCACATGTTGAGCTAAAGAAAATGCTCGTAATTAGTAAGTTTAGTAAGAACCACCCAAAATACCTCTTGAAAGTAGTTGTCAAAATATGTAGTCTTGAAAATACTTTTTGAAACATATAGTTCGAAAACTATTTTTCAAAGCAACTTCCAAAGGACCCATACTCATGAAGTAGAAGTAACACTTGGGATGTCAATAGGTGGTGAAACAAGAATCTGTCCCTTTTTCCTCTTTTCCATACAGATTTGAGGCTATATTTTATTTCGATATGAATTTTAGGAGGTTGTAATTCCACATGACTTATCCCTACTTAATTGTTTGCACTCAGGATCAAAACATCAGTCTCACCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA

mRNA sequence

ATGAGCGGCGAGGCCAAAAGCGGGGGAGCGAGCGGTGGAGCAGGTGGTTTCAGATCGAGAATGGAGTACTATTTATACAGTGGCGATAAAAAGCACGTCGCCGCTGGCATCGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGGATCAAAACATCAGTCTCACCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA

Coding sequence (CDS)

ATGAGCGGCGAGGCCAAAAGCGGGGGAGCGAGCGGTGGAGCAGGTGGTTTCAGATCGAGAATGGAGTACTATTTATACAGTGGCGATAAAAAGCACGTCGCCGCTGGCATCGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGGATCAAAACATCAGTCTCACCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA

Protein sequence

MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSHQDYMERADKARSQRLSSGSSSAK

Homology

[Close]

BLAST of Pay0014411 vs. ExPASy TrEMBL
Match: A0A5D3CFG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001610 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. ExPASy TrEMBL
Match: A0A1S3CEK3 (uncharacterized protein LOC103499845 OS=Cucumis melo OX=3656 GN=LOC103499845 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. ExPASy TrEMBL
Match: A0A6J1GP50 (uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC111455862 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-33
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAKSGG+ GG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGEAKSGGSIGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. ExPASy TrEMBL
Match: A0A6J1JZC0 (uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSG+AKSGG+ GG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGDAKSGGSIGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. ExPASy TrEMBL
Match: A0A6J1DAT5 (uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018966 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.8e-28
Identity = 70/90 (77.78%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAG-------GFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNR 60
          M GE K GGASGG G       GFRSRME++LYSGDKKHVAAGI +  IIFGIPW LM+R
Sbjct: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60

Query: 61 GSKHQSHQDYMERADKARSQRLSSGSSSAK 84
          GSKHQSHQDYMERADKARSQRLSSGSS AK
Sbjct: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90

[Close]

BLAST of Pay0014411 vs. NCBI nr
Match: XP_008461185.1 (PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo] >KAA0058705.1 hypothetical protein E6C27_scaffold339G001750 [Cucumis melo var. makuwa] >TYK10511.1 hypothetical protein E5676_scaffold459G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 2.0e-36
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. NCBI nr
Match: XP_004135879.1 (uncharacterized protein LOC101214375 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAKSGGASGGAGGFRSRME+YLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKH+SH
Sbjct: 1  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHRSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. NCBI nr
Match: XP_022953259.1 (uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 uncharacterized protein LOC111806650 [Cucurbita pepo subsp. pepo] >KAG6575633.1 hypothetical protein SDJN03_26272, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014187.1 hypothetical protein SDJN02_24361 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 4.6e-33
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAKSGG+ GG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGEAKSGGSIGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. NCBI nr
Match: XP_022992483.1 (uncharacterized protein LOC111488802 [Cucurbita maxima])

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSG+AKSGG+ GG GGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPWALMNRGSKHQSH
Sbjct: 1  MSGDAKSGGSIGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDYMERADKARSQRLSSGSSSAK
Sbjct: 61 QDYMERADKARSQRLSSGSSSAK 83

[Close]

BLAST of Pay0014411 vs. NCBI nr
Match: XP_038897164.1 (uncharacterized protein LOC120085312 isoform X2 [Benincasa hispida])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          MSGEAK GGA+GGAGGFRSRME+YLYSG+KKHVAAGIV+ GIIFGIPW LMNRGSKHQSH
Sbjct: 1  MSGEAKRGGATGGAGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWVLMNRGSKHQSH 60

Query: 61 QDYMERADKARSQRLSS 78
          QDYME+ADKARSQRLSS
Sbjct: 61 QDYMEKADKARSQRLSS 77

[Close]

BLAST of Pay0014411 vs. TAIR 10
Match: AT1G80890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16000.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-23
Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 1  MSGEAKSGGASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSH 60
          M  E+KS   + G GG R++ME+Y+YSG+KKHV AGI I  IIFGIPW LMN+GSKH+SH
Sbjct: 1  MGNESKS---NLGGGGIRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSH 60

Query: 61 QDYMERADKARSQRLSSGSSSAK 84
          QDY+E+ADKAR  RLSS SSS K
Sbjct: 61 QDYLEKADKARKARLSSSSSSDK 80

[Close]

BLAST of Pay0014411 vs. TAIR 10
Match: AT1G16000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 7.8e-23
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 1  MSGEAKSGG---ASGGAGGFRSRMEYYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKH 60
          M  E K+ G   +  G GGFR++ME+Y+YSG+KKHV  GI I  IIFG+PW LM +GSKH
Sbjct: 1  MGNETKTNGGPASMAGGGGFRAKMEHYVYSGEKKHVLVGIGIVTIIFGVPWYLMTQGSKH 60

Query: 61 QSHQDYMERADKARSQRLSSGSSSAK 84
          QSHQDYM++ADKAR  RLSS SS+ K
Sbjct: 61 QSHQDYMDKADKARKARLSSSSSANK 86

The following BLAST results are available for this feature:

BLAST of Pay0014411 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0014411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFG0	9.6e-37	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEK3	9.6e-37	100.00	uncharacterized protein LOC103499845 OS=Cucumis melo OX=3656 GN=LOC103499845 PE=...	[more]
A0A6J1GP50	2.2e-33	91.57	uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A6J1JZC0	4.9e-33	90.36	uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802...	[more]
A0A6J1DAT5	4.8e-28	77.78	uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Pay0014411 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461185.1	2.0e-36	100.00	PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo] >KAA0058705.1 hyp...	[more]
XP_004135879.1	2.2e-35	97.59	uncharacterized protein LOC101214375 [Cucumis sativus]	[more]
XP_022953259.1	4.6e-33	91.57	uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 unchar...	[more]
XP_022992483.1	1.0e-32	90.36	uncharacterized protein LOC111488802 [Cucurbita maxima]	[more]
XP_038897164.1	3.6e-30	89.61	uncharacterized protein LOC120085312 isoform X2 [Benincasa hispida]	[more]

BLAST of Pay0014411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80890.1	2.1e-23	66.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16000.1	7.8e-23	61.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..83
None	No IPR available	PANTHER	PTHR35990	GAG1AT PROTEIN	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014411.1	Pay0014411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane