Pay0014217 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014217
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Pol protein
Location	chr08: 13503998 .. 13504600 (-)
RNA-Seq Expression	Pay0014217
Synteny	Pay0014217

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAAAGGTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCAGATCCATCCCACGTAG

mRNA sequence

ATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAAAGGTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCAGATCCATCCCACGTAG

Coding sequence (CDS)

ATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAAAGGTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTACCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCAGATCCATCCCACGTAG

Protein sequence

MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVQIHPT

Homology

[Close]

BLAST of Pay0014217 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-24
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 5    LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 64
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 65   FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 124
            FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1131 FEIVHRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1190

Query: 125  DL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 184
            ++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1191 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1250

Query: 185  -HDVFHVSMLRKY 195
                FHVS L KY
Sbjct: 1251 FSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0014217 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-24
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 5    LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 64
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 65   FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 124
            FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1131 FEIVHRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1190

Query: 125  DL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 184
            ++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1191 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1250

Query: 185  -HDVFHVSMLRKY 195
                FHVS L KY
Sbjct: 1251 FSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0014217 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-24
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 5    LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 64
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 65   FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 124
            FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1131 FEIVHRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1190

Query: 125  DL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 184
            ++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1191 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1250

Query: 185  -HDVFHVSMLRKY 195
                FHVS L KY
Sbjct: 1251 FSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0014217 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-24
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 5    LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 64
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 65   FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 124
            FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1131 FEIVHRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1190

Query: 125  DL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 184
            ++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1191 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1250

Query: 185  -HDVFHVSMLRKY 195
                FHVS L KY
Sbjct: 1251 FSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0014217 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-24
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 5    LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP 64
            + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130

Query: 65   FEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK 124
            FE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +
Sbjct: 1131 FEIVHRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1190

Query: 125  DL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV 184
            ++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +
Sbjct: 1191 EIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1250

Query: 185  -HDVFHVSMLRKY 195
                FHVS L KY
Sbjct: 1251 FSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0014217 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 285 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 344

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 345 GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 404

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSL+
Sbjct: 405 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT 464

Query: 181 TVHDVFHVSMLRKYV 196
           T HDVFHVSMLRKYV
Sbjct: 465 TAHDVFHVSMLRKYV 479

[Close]

BLAST of Pay0014217 vs. ExPASy TrEMBL
Match: A0A5A7UB07 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4565G00010 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.6e-107
Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 61  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           RRKDLEFEVGDKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 121 RRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180

Query: 181 TVHDVFHVSMLRKYV 196
           TVHDVFHVSMLRKYV
Sbjct: 181 TVHDVFHVSMLRKYV 195

[Close]

BLAST of Pay0014217 vs. ExPASy TrEMBL
Match: A0A5A7TDB5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.6e-107
Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 80  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 139

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKSYADV
Sbjct: 140 GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADV 199

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           RRKDLEFEVGDKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILER+GPVAYRLALPPSLS
Sbjct: 200 RRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERVGPVAYRLALPPSLS 259

Query: 181 TVHDVFHVSMLRKYV 196
            VHDVFHVSMLRKYV
Sbjct: 260 AVHDVFHVSMLRKYV 274

[Close]

BLAST of Pay0014217 vs. ExPASy TrEMBL
Match: A0A5A7V8X5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005070 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.3e-107
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1    MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1189 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1248

Query: 61   GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
            GMAPFE LYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1249 GMAPFETLYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1308

Query: 121  RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
            RRKDLEFEVGDKVFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 1309 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1368

Query: 181  TVHDVFHVSMLRKYV 196
            TVHDVFHVSMLRKYV
Sbjct: 1369 TVHDVFHVSMLRKYV 1383

[Close]

BLAST of Pay0014217 vs. ExPASy TrEMBL
Match: A0A5A7V8L8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.3e-107
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1    MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1296 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1355

Query: 61   GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
            GMAPFEALYGKCC+SPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1356 GMAPFEALYGKCCKSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1415

Query: 121  RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
            RRKDLEFEVGDKVFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGP+AYRLALPPSLS
Sbjct: 1416 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPIAYRLALPPSLS 1475

Query: 181  TVHDVFHVSMLRKYV 196
            TVHDVFHVSMLRKYV
Sbjct: 1476 TVHDVFHVSMLRKYV 1490

[Close]

BLAST of Pay0014217 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-107
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 285 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 344

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 345 GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 404

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSL+
Sbjct: 405 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT 464

Query: 181 TVHDVFHVSMLRKYV 196
           T HDVFHVSMLRKYV
Sbjct: 465 TAHDVFHVSMLRKYV 479

[Close]

BLAST of Pay0014217 vs. NCBI nr
Match: KAA0041424.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 80  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 139

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKSYADV
Sbjct: 140 GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADV 199

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           RRKDLEFEVGDKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILER+GPVAYRLALPPSLS
Sbjct: 200 RRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERVGPVAYRLALPPSLS 259

Query: 181 TVHDVFHVSMLRKYV 196
            VHDVFHVSMLRKYV
Sbjct: 260 AVHDVFHVSMLRKYV 274

[Close]

BLAST of Pay0014217 vs. NCBI nr
Match: KAA0050751.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 61  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           RRKDLEFEVGDKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 121 RRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180

Query: 181 TVHDVFHVSMLRKYV 196
           TVHDVFHVSMLRKYV
Sbjct: 181 TVHDVFHVSMLRKYV 195

[Close]

BLAST of Pay0014217 vs. NCBI nr
Match: KAA0058465.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
           MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 34  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 93

Query: 61  GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
           GMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 94  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 153

Query: 121 RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
           R+KDLEFEVGDKVFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 154 RQKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 213

Query: 181 TVHDVFHVSMLRKYV 196
           TVHDVFHVSMLRKYV
Sbjct: 214 TVHDVFHVSMLRKYV 228

[Close]

BLAST of Pay0014217 vs. NCBI nr
Match: KAA0062141.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1    MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 60
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1189 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1248

Query: 61   GMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 120
            GMAPFE LYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1249 GMAPFETLYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1308

Query: 121  RRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 180
            RRKDLEFEVGDKVFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 1309 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1368

Query: 181  TVHDVFHVSMLRKYV 196
            TVHDVFHVSMLRKYV
Sbjct: 1369 TVHDVFHVSMLRKYV 1383

The following BLAST results are available for this feature:

BLAST of Pay0014217 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.3e-24	35.23	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.3e-24	35.23	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.3e-24	35.23	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.3e-24	35.23	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.3e-24	35.23	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0014217 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZZ4	1.1e-107	98.97	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]
A0A5A7UB07	5.6e-107	98.46	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4565G00010 P...	[more]
A0A5A7TDB5	5.6e-107	97.44	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 ...	[more]
A0A5A7V8X5	7.3e-107	98.46	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005070 PE...	[more]
A0A5A7V8L8	7.3e-107	97.95	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE...	[more]

BLAST of Pay0014217 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060848.1	2.3e-107	98.97	pol protein [Cucumis melo var. makuwa]	[more]
KAA0041424.1	1.2e-106	97.44	pol protein [Cucumis melo var. makuwa]	[more]
KAA0050751.1	1.2e-106	98.46	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058465.1	1.5e-106	98.46	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062141.1	1.5e-106	98.46	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0014217 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..115 e-value: 6.3E-22 score: 79.8
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 26..195
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 26..195
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..72 score: 10.959769
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014217.1	Pay0014217.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding