Pay0014152 (gene) Melon (Payzawat) v1

Overview


Name	Pay0014152
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag-pol polyprotein
Location	chr11: 9140518 .. 9140922 (-)
RNA-Seq Expression	Pay0014152
Synteny	Pay0014152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACCAGAAGGAAAGATAAGATTGACTATTTGAAGATGGTTGCTGACTTGTGCTATATTTCCACCATTAAACCTTCGACTGTTGACTCTGCTCTCAAAGATGAGTATTGGTTAAATGCTATGCAAGAGGAGCTACTGCAATTTAGACGAAACAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAACGTTATTGGCATCAAATGGATATTTAAAAATAAGACTGATGAAACTAGATGTGTGACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATACTCAAGTTGAAGGTGTTGACTTTGATGAAACATTTTCTCCTGTTGCTCGACTTGAAGCCATTCAGCTTTTACTGGACATATCATGCATACAGAATTTAAATTGTATCAGATGGATGTAA

mRNA sequence

ATGCAGACCAGAAGGAAAGATAAGATTGACTATTTGAAGATGGTTGCTGACTTGTGCTATATTTCCACCATTAAACCTTCGACTGTTGACTCTGCTCTCAAAGATGAGTATTGGTTAAATGCTATGCAAGAGGAGCTACTGCAATTTAGACGAAACAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAACGTTATTGGCATCAAATGGATATTTAAAAATAAGACTGATGAAACTAGATGTGTGACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATACTCAAGTTGAAGGTGTTGACTTTGATGAAACATTTTCTCCTGTTGCTCGACTTGAAGCCATTCAGCTTTTACTGGACATATCATGCATACAGAATTTAAATTGTATCAGATGGATGTAA

Coding sequence (CDS)

ATGCAGACCAGAAGGAAAGATAAGATTGACTATTTGAAGATGGTTGCTGACTTGTGCTATATTTCCACCATTAAACCTTCGACTGTTGACTCTGCTCTCAAAGATGAGTATTGGTTAAATGCTATGCAAGAGGAGCTACTGCAATTTAGACGAAACAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAACGTTATTGGCATCAAATGGATATTTAAAAATAAGACTGATGAAACTAGATGTGTGACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATACTCAAGTTGAAGGTGTTGACTTTGATGAAACATTTTCTCCTGTTGCTCGACTTGAAGCCATTCAGCTTTTACTGGACATATCATGCATACAGAATTTAAATTGTATCAGATGGATGTAA

Protein sequence

MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLDISCIQNLNCIRWM

Homology

[Close]

BLAST of Pay0014152 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-20
Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIK--PSTVDSALKDEYWLNAMQEELLQFRRNNVWTLV 60
           M TR K  I+ L     L   +TIK  P +V  ALKD  W  AMQEEL    RN  W LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 61  SKPEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQL 120
             P   N++G KW+FK K      + + KARLVA+G+ Q EG+ F ET+SPV R   I+ 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 121 LLDIS-CIQNLNCIRWM 135
           +L+++  ++    I WM
Sbjct: 121 ILNVAQQLEVGQSINWM 137

[Close]

BLAST of Pay0014152 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.5e-16
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 25   KPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGIKWIFKNKTDETRCV 84
            +P T   ALKDE W NAM  E+     N+ W LV  P   V ++G +WIF  K +    +
Sbjct: 955  EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1014

Query: 85   TKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLDIS 124
             + KARLVA+GY Q  G+D+ ETFSPV +  +I+++L ++
Sbjct: 1015 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVA 1054

[Close]

BLAST of Pay0014152 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.4e-15
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 1    MQTRRKD-------KIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNN 60
            M TR KD       K  Y   +A     +  +P T   A+KD+ W  AM  E+     N+
Sbjct: 912  MATRAKDGIRKPNQKYSYATSLA-----ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNH 971

Query: 61   VWTLV-SKPEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVAR 120
             W LV   P  V ++G +WIF  K +    + + KARLVA+GY Q  G+D+ ETFSPV +
Sbjct: 972  TWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIK 1031

Query: 121  LEAIQLLLDIS 124
              +I+++L ++
Sbjct: 1032 STSIRIVLGVA 1037

[Close]

BLAST of Pay0014152 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 38  WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQ 97
           W  A+  EL   + NN WT+  +PE  N++  +W+F  K +E     + KARLVA+G+TQ
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 98  VEGVDFDETFSPVARLEAIQLLLDISCIQNL 129
              +D++ETF+PVAR+ + + +L +    NL
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNL 996

[Close]

BLAST of Pay0014152 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 35/90 (38.89%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 39  LNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQV 98
           + AMQEE+   ++N  + LV  P+G   +  KW+FK K D    + + KARLV +G+ Q 
Sbjct: 827 MKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQK 886

Query: 99  EGVDFDETFSPVARLEAIQLLLDISCIQNL 129
           +G+DFDE FSPV ++ +I+ +L ++   +L
Sbjct: 887 KGIDFDEIFSPVVKMTSIRTILSLAASLDL 916

[Close]

BLAST of Pay0014152 vs. ExPASy TrEMBL
Match: A0A1S4E1I5 (uncharacterized mitochondrial protein AtMg00820-like OS=Cucumis melo OX=3656 GN=LOC107991436 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.6e-71
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60
           MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK
Sbjct: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60

Query: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120
           PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL
Sbjct: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120

Query: 121 DISCIQNLNCIRWM 135
           DISCIQNLNCIRWM
Sbjct: 121 DISCIQNLNCIRWM 134

[Close]

BLAST of Pay0014152 vs. ExPASy TrEMBL
Match: A0A5D3CXU0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00820 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.5e-58
Identity = 110/126 (87.30%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60
           MQTRRK+KIDY+KMVADLCYIST++PSTVDSAL+DEYWLNAMQEELLQFR+NNVWTLVSK
Sbjct: 538 MQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSK 597

Query: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120
           PEGVNVIG KW+FKNKTDE  CVTKNKA+LVAQGYTQVEG+DFDETF+ VARLEAI+LLL
Sbjct: 598 PEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLL 657

Query: 121 DISCIQ 127
            ISCIQ
Sbjct: 658 GISCIQ 663

[Close]

BLAST of Pay0014152 vs. ExPASy TrEMBL
Match: A0A5D3B9N4 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00690 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.1e-57
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60
           MQTRRK+KIDY KMVADLCY STI+PSTVDSALK+EYWLNAMQE+LLQFRRNNVWTLVSK
Sbjct: 237 MQTRRKEKIDYTKMVADLCYTSTIEPSTVDSALKNEYWLNAMQEKLLQFRRNNVWTLVSK 296

Query: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120
           PEGVNVIG KW+FKNKTDE RCVTKNKARLVAQGY QV+G+DF+ETF+PVARLEAI+LLL
Sbjct: 297 PEGVNVIGTKWVFKNKTDEARCVTKNKARLVAQGYIQVKGIDFEETFAPVARLEAIRLLL 356

Query: 121 DISCIQ 127
            ISCIQ
Sbjct: 357 GISCIQ 362

[Close]

BLAST of Pay0014152 vs. ExPASy TrEMBL
Match: A0A5A7UJR8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00050 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.1e-57
Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   QTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKP 61
           +TRRKDKIDYL MVADLCYISTI+ STVDSALKD+YWLNAMQE+LLQFRRNNVWTLVSKP
Sbjct: 508 ETRRKDKIDYLNMVADLCYISTIELSTVDSALKDDYWLNAMQEKLLQFRRNNVWTLVSKP 567

Query: 62  EGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLD 121
           EGVNVIG KWIFKNKTDET CVTKNKA+LV QGYTQVEGVDFDETF+P+ARL+AI+LLL 
Sbjct: 568 EGVNVIGTKWIFKNKTDETGCVTKNKAKLVVQGYTQVEGVDFDETFAPIARLKAIRLLLG 627

Query: 122 ISCIQ 127
           ISCIQ
Sbjct: 628 ISCIQ 632

[Close]

BLAST of Pay0014152 vs. ExPASy TrEMBL
Match: A0A5D3CRK1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00040 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.1e-57
Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   QTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKP 61
           +TRRKDKIDYLKMVADLCYISTI+ STVDSALKDEYWLNAMQEELLQFRRNNVWTL+SKP
Sbjct: 463 ETRRKDKIDYLKMVADLCYISTIELSTVDSALKDEYWLNAMQEELLQFRRNNVWTLISKP 522

Query: 62  EGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLD 121
           EGVNVIG KWIFKNKTDET CVTKNKA+LV QGY+QVEGVDFDET +P+ARL+AI+LLL 
Sbjct: 523 EGVNVIGTKWIFKNKTDETGCVTKNKAKLVVQGYSQVEGVDFDETVAPIARLKAIRLLLG 582

Query: 122 ISCIQ 127
           ISCIQ
Sbjct: 583 ISCIQ 587

[Close]

BLAST of Pay0014152 vs. NCBI nr
Match: XP_016901850.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00820-like [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60
           MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK
Sbjct: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60

Query: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120
           PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL
Sbjct: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120

Query: 121 DISCIQNLNCIRWM 135
           DISCIQNLNCIRWM
Sbjct: 121 DISCIQNLNCIRWM 134

[Close]

BLAST of Pay0014152 vs. NCBI nr
Match: KAA0066164.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK15206.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 110/126 (87.30%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60
           MQTRRK+KIDY+KMVADLCYIST++PSTVDSAL+DEYWLNAMQEELLQFR+NNVWTLVSK
Sbjct: 538 MQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSK 597

Query: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120
           PEGVNVIG KW+FKNKTDE  CVTKNKA+LVAQGYTQVEG+DFDETF+ VARLEAI+LLL
Sbjct: 598 PEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLL 657

Query: 121 DISCIQ 127
            ISCIQ
Sbjct: 658 GISCIQ 663

[Close]

BLAST of Pay0014152 vs. NCBI nr
Match: KAA0033543.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYJ95644.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 4.3e-57
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSK 60
           MQTRRK+KIDY KMVADLCY STI+PSTVDSALK+EYWLNAMQE+LLQFRRNNVWTLVSK
Sbjct: 237 MQTRRKEKIDYTKMVADLCYTSTIEPSTVDSALKNEYWLNAMQEKLLQFRRNNVWTLVSK 296

Query: 61  PEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLL 120
           PEGVNVIG KW+FKNKTDE RCVTKNKARLVAQGY QV+G+DF+ETF+PVARLEAI+LLL
Sbjct: 297 PEGVNVIGTKWVFKNKTDEARCVTKNKARLVAQGYIQVKGIDFEETFAPVARLEAIRLLL 356

Query: 121 DISCIQ 127
            ISCIQ
Sbjct: 357 GISCIQ 362

[Close]

BLAST of Pay0014152 vs. NCBI nr
Match: TYK14493.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   QTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKP 61
           +TRRKDKIDYLKMVADLCYISTI+ STVDSALKDEYWLNAMQEELLQFRRNNVWTL+SKP
Sbjct: 463 ETRRKDKIDYLKMVADLCYISTIELSTVDSALKDEYWLNAMQEELLQFRRNNVWTLISKP 522

Query: 62  EGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLD 121
           EGVNVIG KWIFKNKTDET CVTKNKA+LV QGY+QVEGVDFDET +P+ARL+AI+LLL 
Sbjct: 523 EGVNVIGTKWIFKNKTDETGCVTKNKAKLVVQGYSQVEGVDFDETVAPIARLKAIRLLLG 582

Query: 122 ISCIQ 127
           ISCIQ
Sbjct: 583 ISCIQ 587

[Close]

BLAST of Pay0014152 vs. NCBI nr
Match: KAA0056213.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   QTRRKDKIDYLKMVADLCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKP 61
           +TRRKDKIDYL MVADLCYISTI+ STVDSALKD+YWLNAMQE+LLQFRRNNVWTLVSKP
Sbjct: 508 ETRRKDKIDYLNMVADLCYISTIELSTVDSALKDDYWLNAMQEKLLQFRRNNVWTLVSKP 567

Query: 62  EGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLD 121
           EGVNVIG KWIFKNKTDET CVTKNKA+LV QGYTQVEGVDFDETF+P+ARL+AI+LLL 
Sbjct: 568 EGVNVIGTKWIFKNKTDETGCVTKNKAKLVVQGYTQVEGVDFDETFAPIARLKAIRLLLG 627

Query: 122 ISCIQ 127
           ISCIQ
Sbjct: 628 ISCIQ 632

[Close]

BLAST of Pay0014152 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-21
Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 1   MQTRRKDKIDYLKMVADLCYISTIK--PSTVDSALKDEYWLNAMQEELLQFRRNNVWTLV 60
           M TR K  I+ L     L   +TIK  P +V  ALKD  W  AMQEEL    RN  W LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 61  SKPEGVNVIGIKWIFKNKTDETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQL 120
             P   N++G KW+FK K      + + KARLVA+G+ Q EG+ F ET+SPV R   I+ 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 121 LLDIS-CIQNLNCIRWM 135
           +L+++  ++    I WM
Sbjct: 121 ILNVAQQLEVGQSINWM 137

[Close]

BLAST of Pay0014152 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 0


Query: 18  LCYISTIKPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGIKWIFKNKT 77
           +C     +PST + A +   W  AM +E+      + W + + P     IG KW++K K 
Sbjct: 78  VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137

Query: 78  DETRCVTKNKARLVAQGYTQVEGVDFDETFSPVARLEAIQLLLDISCIQN 128
           +    + + KARLVA+GYTQ EG+DF ETFSPV +L +++L+L IS I N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYN 187

The following BLAST results are available for this feature:

BLAST of Pay0014152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92520	2.6e-20	42.34	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	8.5e-16	42.00	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	9.4e-15	35.88	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	2.7e-14	38.46	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	1.8e-13	38.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Pay0014152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1I5	5.6e-71	100.00	uncharacterized mitochondrial protein AtMg00820-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3CXU0	5.5e-58	87.30	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G...	[more]
A0A5D3B9N4	2.1e-57	87.30	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G...	[more]
A0A5A7UJR8	6.1e-57	88.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CRK1	6.1e-57	88.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Pay0014152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901850.1	1.2e-70	100.00	PREDICTED: uncharacterized mitochondrial protein AtMg00820-like [Cucumis melo]	[more]
KAA0066164.1	1.1e-57	87.30	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK15206.1 gag-pol polyprotein [...	[more]
KAA0033543.1	4.3e-57	87.30	gag-pol polyprotein [Cucumis melo var. makuwa] >TYJ95644.1 gag-pol polyprotein [...	[more]
TYK14493.1	1.2e-56	88.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0056213.1	1.2e-56	88.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0014152 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00820.1	1.8e-21	42.34	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	1.3e-19	40.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 52..127 e-value: 1.3E-23 score: 83.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0014152.1	Pay0014152.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding