Pay0014092 (gene) Melon (Payzawat) v1

Overview
NamePay0014092
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCasein kinase 1-like protein HD16
Locationchr03: 26973520 .. 26975415 (-)
RNA-Seq ExpressionPay0014092
SyntenyPay0014092
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATGGATTTTTGTGGCAAACACTTGACTGTGGCTAATGGAGTTGATGTAGCTAAACTATTCATTAACATCACCAACGTATTGCATCAGTTACAGACGCCTATGCTCTCGCTTTCATTCATGTTATTCAAGTATGAGCTAATTTTAGATCTTTCATGTCCCTGGGGTTTGGGTATTTTTACCAATTTGTTAAAGGTTTTGTATAGTCTTGAGCACTAGTTCTTGGTTGAAGGCATGTGCACAGCATAGGTCATCTTTTCTGGGTGCTGGGGAAATGTGCAGTTTCGGTTATCAAGCATCAGTGGGCTCTGGCTATCCATATCCATTTTGCTTGTACTTAGATCCTTATCTATCACCTTTTTGGAACTGAGGATATTCTAAATGTCTGAACCTGGAAGATATTGATTTTACACTTCTAAGTGACACTTTTAGTGGATTTTGTATCAATATAATCATTAGTTAACTGCTGATTTTGTGGCTTGTGCCTACCCCCTTATTTTTGTGGATATGTACTAGGGTAGCAGATATTGATTATCACACTCTGGAATCGCTGTCATATTTACTCCCACCCCTTATTTTAGAATATAAAATGAACTACTTCCTCTTTACAAGGTTGATAACGACCCATTTATTTATTTATTTATTTTTTACCCTTTAATTCTGAATTCCATTTTGGACCCAGTTGGTCTACAGTTTTTTTCCCTGGCACCTTCCACTATGTAAGATTATAAAGTTTCCTTCCCCCTGCAGTAGATCACAAGATTTCTCAAACCAGAGATCCTGTAGCTGAATATAGTCGAGGCACAAATTGCATCTACATTTGGCTGTACAGAGGCTGAATGTGGAATTTTGCTAATGGACTTGTTGGTTGCAGCAAATTATGTCAGATTCAGCCATCAGCTAGGTGGCCAATTAGATCTTGCCAATTTGGTAATGCCAGTCCACCATTACCATTTTCTTCTTGTCTTTGGCCCAGACTTTGGAATCGGAAAGTTGTGGGGCTCCATCATCTACCAAGAATGAAGATGGCTGCCATCTGGTTTCCAAGTGCCATCAAACAGCTTCATGCAGTTCTTCCAGTGATTCTACCATGGTGTTGCATTTTTCTTTGAGCAAGTACGTCGGTGTAGTGTGGTAAGGAAAACTATTCATTTTAAATGTTTGTTGATATGAACTTGTGGTTTTCAATTTTGGAGGTAGCAAAGTTCAAAGTGAAATACTATGCATGTTAATGTAATTTAAGTAGTGGATCCACTACTAATTAAACACTCTTTCCCTTTTCTGTTATTGATCCACTACTTTTCTGATAGAAACGACAACCTTCATTTTTTTGTGAATGAAAGTTGTTTCTATAAAAGTAGTGGATAAATAATAGAAAAGGTAAAGAGTGTTTAATTAAGTGCTCCTCACGTCCCTGAGAAAGAGGCAGTACCTTTCCCTGAGAATTTTGGGTAAAGTACCTGAATCTCACGCCCTGCATTGATTTTTGAGAGAAAAGATTTCTTTCCTGCCACTACCCGACTGCCCCTTGGAAATTCATAGCAACAAATGTCCAGTGGGCTTCAGAAGATTTTGAACTTCTTTTTGGAGATGCTACACTTTGGATTGACAGTAGCTTGGTTATTTGTCAATTTGTTGCGTTGCATCTACTTCTATTATTGAATCATGATTCATGTGTTGTGATTGGATGGTGTGCTGTGTATGAGTTTTGATATCAATAGAGAATATGTTTTTGTACTGAACATGGAGGCAATGAAGATCATTTTTCTATTTTTGTGATTGTATTGTATAGATACTGCTCATTCAGAATCAAAGAATTGAATAACTTTTTTTACTTATTCTGTTTCTATTATTAACTGCAGGTGTCTGAACTTTAAATTAGCACCTTCATAA

mRNA sequence

ATGGATATGGATTTTTGTGGCAAACACTTGACTGTGGCTAATGGAGTTGATGTAGCTAAACTATTCATTAACATCACCAACGTATTGCATCAGTTACAGACGCCTATGCTCTCGCTTTCATTCATGTTATTCAAGTTTTGTATAGTCTTGAGCACTAGTTCTTGGTTGAAGGCATGTGCACAGCATAGGTCATCTTTTCTGGGTGCTGGGGAAATGTGCAGTTTCGAGGCTGAATGTGGAATTTTGCTAATGGACTTGTTGGTTGCAGCAAATTATGTCAGATTCAGCCATCAGCTAGGTGGCCAATTAGATCTTGCCAATTTGACTTTGGAATCGGAAAGTTGTGGGGCTCCATCATCTACCAAGAATGAAGATGGCTGCCATCTGGTTTCCAAGTGCCATCAAACAGCTTCATGCAGTTCTTCCAGTGATTCTACCATGGTGTTGCATTTTTCTTTGAGCAAGTACGTCGGTGTAGTGTGGTGTCTGAACTTTAAATTAGCACCTTCATAA

Coding sequence (CDS)

ATGGATATGGATTTTTGTGGCAAACACTTGACTGTGGCTAATGGAGTTGATGTAGCTAAACTATTCATTAACATCACCAACGTATTGCATCAGTTACAGACGCCTATGCTCTCGCTTTCATTCATGTTATTCAAGTTTTGTATAGTCTTGAGCACTAGTTCTTGGTTGAAGGCATGTGCACAGCATAGGTCATCTTTTCTGGGTGCTGGGGAAATGTGCAGTTTCGAGGCTGAATGTGGAATTTTGCTAATGGACTTGTTGGTTGCAGCAAATTATGTCAGATTCAGCCATCAGCTAGGTGGCCAATTAGATCTTGCCAATTTGACTTTGGAATCGGAAAGTTGTGGGGCTCCATCATCTACCAAGAATGAAGATGGCTGCCATCTGGTTTCCAAGTGCCATCAAACAGCTTCATGCAGTTCTTCCAGTGATTCTACCATGGTGTTGCATTTTTCTTTGAGCAAGTACGTCGGTGTAGTGTGGTGTCTGAACTTTAAATTAGCACCTTCATAA

Protein sequence

MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKFCIVLSTSSWLKACAQHRSSFLGAGEMCSFEAECGILLMDLLVAANYVRFSHQLGGQLDLANLTLESESCGAPSSTKNEDGCHLVSKCHQTASCSSSSDSTMVLHFSLSKYVGVVWCLNFKLAPS
Homology
[Close]
BLAST of Pay0014092 vs. ExPASy TrEMBL
Match: A0A0A0LLI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373530 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 8.3e-35
Identity = 92/168 (54.76%), Postives = 96/168 (57.14%), Query Frame = 0 

Query: 3   MDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKFCIVLSTSSWLKACAQH 62
           MDF GKHLTVANGVDVAKLFINITNVLHQLQTPML LSFMLFKF        W       
Sbjct: 1   MDFYGKHLTVANGVDVAKLFINITNVLHQLQTPMLWLSFMLFKF--------W------- 60

Query: 63  RSSFLGAGEMCSFEAECGILLMDLLVAANYVRFSHQLGGQLDLANLTLESESCGAPSSTK 122
                                                             +  G PSS K
Sbjct: 61  ------------------------------------------------NRKVVGLPSSIK 105

Query: 123 NEDGCHLVSKCHQTASCSSSSDSTMVLHFSLSKYVGVVWCLNFKLAPS 171
           NEDGCHL+SKCHQT SCSSSSDST+VLHFSLSKY+GVVWCLNFKLAPS
Sbjct: 121 NEDGCHLISKCHQTTSCSSSSDSTIVLHFSLSKYIGVVWCLNFKLAPS 105

[Close]
BLAST of Pay0014092 vs. ExPASy TrEMBL
Match: A0A5A7VGM3 (Casein kinase 1-like protein HD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003730 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23
Identity = 70/111 (63.06%), Postives = 75/111 (67.57%), Query Frame = 0 

Query: 1   MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKFCIVLSTSSW-LKAC 60
           MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFK    +    W L  C
Sbjct: 756 MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKHVHSIGHLFWVLGKC 815

Query: 61  AQHRSSFLGAGEMCSFEAECGILLMDLLVAANYVRFSHQLGGQLDLANLTL 111
           A             S       L + +  A+NYVRFSHQLGGQLDLANL +
Sbjct: 816 A------------VSVIKHQWALAIHIHFASNYVRFSHQLGGQLDLANLVM 854

[Close]
BLAST of Pay0014092 vs. NCBI nr
Match: KGN62810.1 (hypothetical protein Csa_022016 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-34
Identity = 92/168 (54.76%), Postives = 96/168 (57.14%), Query Frame = 0 

Query: 3   MDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKFCIVLSTSSWLKACAQH 62
           MDF GKHLTVANGVDVAKLFINITNVLHQLQTPML LSFMLFKF        W       
Sbjct: 1   MDFYGKHLTVANGVDVAKLFINITNVLHQLQTPMLWLSFMLFKF--------W------- 60

Query: 63  RSSFLGAGEMCSFEAECGILLMDLLVAANYVRFSHQLGGQLDLANLTLESESCGAPSSTK 122
                                                             +  G PSS K
Sbjct: 61  ------------------------------------------------NRKVVGLPSSIK 105

Query: 123 NEDGCHLVSKCHQTASCSSSSDSTMVLHFSLSKYVGVVWCLNFKLAPS 171
           NEDGCHL+SKCHQT SCSSSSDST+VLHFSLSKY+GVVWCLNFKLAPS
Sbjct: 121 NEDGCHLISKCHQTTSCSSSSDSTIVLHFSLSKYIGVVWCLNFKLAPS 105

[Close]
BLAST of Pay0014092 vs. NCBI nr
Match: KAA0065045.1 (casein kinase 1-like protein HD16 [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-23
Identity = 70/111 (63.06%), Postives = 75/111 (67.57%), Query Frame = 0 

Query: 1   MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKFCIVLSTSSW-LKAC 60
           MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFK    +    W L  C
Sbjct: 756 MDMDFCGKHLTVANGVDVAKLFINITNVLHQLQTPMLSLSFMLFKHVHSIGHLFWVLGKC 815

Query: 61  AQHRSSFLGAGEMCSFEAECGILLMDLLVAANYVRFSHQLGGQLDLANLTL 111
           A             S       L + +  A+NYVRFSHQLGGQLDLANL +
Sbjct: 816 A------------VSVIKHQWALAIHIHFASNYVRFSHQLGGQLDLANLVM 854

The following BLAST results are available for this feature:
BLAST of Pay0014092 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0014092 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLI98.3e-3554.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373530 PE=4 SV=1[more]
A0A5A7VGM31.1e-2363.06Casein kinase 1-like protein HD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of Pay0014092 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62810.11.7e-3454.76hypothetical protein Csa_022016 [Cucumis sativus][more]
KAA0065045.12.3e-2363.06casein kinase 1-like protein HD16 [Cucumis melo var. makuwa][more]
BLAST of Pay0014092 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0014092.1Pay0014092.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016740 transferase activity