Pay0014066 (gene) Melon (Payzawat) v1

Overview
NamePay0014066
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr01: 28067193 .. 28067577 (-)
RNA-Seq ExpressionPay0014066
SyntenyPay0014066
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATACCTGGGATCAAACTCCCGTTGTCCTGAGAGGCCCCTCGGTTGCTTCTGCGCACTTGTATGTATGAAACTTCATTTTTTTTCTTCTTTGTCTACAGAGTATCATCATCAAATCATCCTATTCTTTGACAATGCGCAACACACTTGTATGTATGAAACTCATTTTTTTCTTCTTTTTCTTTGCCTACAGATTATCATCATCAAATCATCCTATTCTTTGTGCTGCCAGAAGCATGGAGAAGAGGATGATTTGATGCACAATGACCACAACGCACTACACTTGTGCATGAAACTTCAGTTCTTCTCCGTCCTGCCAGACAACCCTACTCAATGTACCATTAATTTTTCTTTACAGATACAATTGACATGTTTTCTTTATAA

mRNA sequence

ATGTATACCTGGGATCAAACTCCCGTTGTCCTGAGAGGCCCCTCGGTTGCTTCTGCGCACTTGTATATTATCATCATCAAATCATCCTATTCTTTGTGCTGCCAGAAGCATGGAGAAGAGGATGATTTGATGCACAATGACCACAACGCACTACACTTGTGCATGAAACTTCAGTTCTTCTCCGTCCTGCCAGACAACCCTACTCAATATACAATTGACATGTTTTCTTTATAA

Coding sequence (CDS)

ATGTATACCTGGGATCAAACTCCCGTTGTCCTGAGAGGCCCCTCGGTTGCTTCTGCGCACTTGTATATTATCATCATCAAATCATCCTATTCTTTGTGCTGCCAGAAGCATGGAGAAGAGGATGATTTGATGCACAATGACCACAACGCACTACACTTGTGCATGAAACTTCAGTTCTTCTCCGTCCTGCCAGACAACCCTACTCAATATACAATTGACATGTTTTCTTTATAA

Protein sequence

MYTWDQTPVVLRGPSVASAHLYIIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQYTIDMFSL
Homology
[Close]
BLAST of Pay0014066 vs. ExPASy TrEMBL
Match: A0A5A7UUK4 (Putative L-type lectin-domain containing receptor kinase S.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00340 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 23  IIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQ 70
           IIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQ
Sbjct: 697 IIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQ 743

[Close]
BLAST of Pay0014066 vs. NCBI nr
Match: KAA0059583.1 (putative L-type lectin-domain containing receptor kinase S.5 [Cucumis melo var. makuwa] >TYK25789.1 putative L-type lectin-domain containing receptor kinase S.5 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 3.5e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 23  IIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQ 70
           IIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQ
Sbjct: 697 IIIIKSSYSLCCQKHGEEDDLMHNDHNALHLCMKLQFFSVLPDNPTQ 743

The following BLAST results are available for this feature:
BLAST of Pay0014066 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0014066 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UUK41.7e-19100.00Putative L-type lectin-domain containing receptor kinase S.5 OS=Cucumis melo var... [more]
BLAST of Pay0014066 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0059583.13.5e-19100.00putative L-type lectin-domain containing receptor kinase S.5 [Cucumis melo var. ... [more]
BLAST of Pay0014066 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0014066.1Pay0014066.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004672 protein kinase activity