Pay0013849 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013849
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotransposon protein
Location	chr06: 30031894 .. 30032855 (+)
RNA-Seq Expression	Pay0013849
Synteny	Pay0013849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAACACGAGTTGGCGTCTATTGTAAATGCGTTCATAGCATCCCAACGACAGTTGTTACTAATGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACATCCCGTATGAAACTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGGTCAGACCTTGTCTGTCGCCAAAGTACGAGAATGGACCAAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCTTCGATGTTGAGGAGATGGTAGCAATGTTTCTCCACATTCTTGCGCACGATGTAAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTTCCGTCATTTCAACATGGTTTTGTTGGCCGTTATTCGACTTCATGAGGAGCTGTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGCTTTGAGGTACACATTTGTCTGGAACTACGTACTTCCAACACAAGGACGTTAGTTCTTCTCAATAATTTTTAGTTATGCGGTGCAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTAACCGGGCTAGGTATAGAACACGCAAGGGGGAGTTGGCCACAAATGTACTTGGCGTGTGTGACACGAAAGGAGATTTTGTTTACGTACTTGCCGGTTGGGAAGGATCAGCTGCGGACTCAAGCATCCTCCGTGATGCCCTTTCAAGACCTAATAGGCTTAAGGTGCCCAAGGGTAAGTAACAAGGGCATTGTACCTATGAATGGAATTTTAGAAGTAACAACTGCGACATTTTAATCGTGCATTGTGATTACAGGCTATTACTACTTGGTTGATGTCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCATACAGAGGCCAACGCTATCACTTACAAGAATGA

mRNA sequence

ATGGACGAACACGAGTTGGCGTCTATTGTAAATGCGTTCATAGCATCCCAACGACAGTTGTTACTAATGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACATCCCGTATGAAACTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGGTCAGACCTTGTCTGTCGCCAAAGTACGAGAATGGACCAAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCTTCGATGTTGAGGAGATGGTAGCAATGTTTCTCCACATTCTTGCGCACGATGTAAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTTCCGTCATTTCAACATGGTTTTGTTGGCCGTTATTCGACTTCATGAGGAGCTGTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGCTTTGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTAACCGGGCTAGGTATAGAACACGCAAGGGGGAGTTGGCCACAAATGTACTTGGCGTGTGTGACACGAAAGGAGATTTTGTTTACGTACTTGCCGGTTGGGAAGGATCAGCTGCGGACTCAAGCATCCTCCGTGATGCCCTTTCAAGACCTAATAGGCTTAAGGTGCCCAAGGGCTATTACTACTTGGTTGATGTCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCATACAGAGGCCAACGCTATCACTTACAAGAATGA

Coding sequence (CDS)

ATGGACGAACACGAGTTGGCGTCTATTGTAAATGCGTTCATAGCATCCCAACGACAGTTGTTACTAATGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACATCCCGTATGAAACTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGGTCAGACCTTGTCTGTCGCCAAAGTACGAGAATGGACCAAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCTTCGATGTTGAGGAGATGGTAGCAATGTTTCTCCACATTCTTGCGCACGATGTAAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTTCCGTCATTTCAACATGGTTTTGTTGGCCGTTATTCGACTTCATGAGGAGCTGTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGCTTTGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTAACCGGGCTAGGTATAGAACACGCAAGGGGGAGTTGGCCACAAATGTACTTGGCGTGTGTGACACGAAAGGAGATTTTGTTTACGTACTTGCCGGTTGGGAAGGATCAGCTGCGGACTCAAGCATCCTCCGTGATGCCCTTTCAAGACCTAATAGGCTTAAGGTGCCCAAGGGCTATTACTACTTGGTTGATGTCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCATACAGAGGCCAACGCTATCACTTACAAGAATGA

Protein sequence

MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPASNRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQE

Homology

[Close]

BLAST of Pay0013849 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 258/266 (96.99%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQRYHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.8e-146
Identity = 257/266 (96.62%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQRYHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. ExPASy TrEMBL
Match: A0A5A7VG29 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3818G00010 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.2e-146
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSR NRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRLNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQ YHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQHYHLQE 266

[Close]

BLAST of Pay0013849 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 256/266 (96.24%), Postives = 259/266 (97.37%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           C QSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHIL HDVKNRVIQREFMRS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQRYHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. ExPASy TrEMBL
Match: A0A5A7VHB0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00240 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.3e-145
Identity = 254/266 (95.49%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIH SDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETIFRHFNM+ LAVIRLH+ELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETIFRHFNMIFLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           ++ARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DQARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVDVGYPN EGFLAPYRGQRYHLQE
Sbjct: 241 YLVDVGYPNVEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146
Identity = 258/266 (96.99%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQRYHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 526.9 bits (1356), Expect = 9.8e-146
Identity = 257/266 (96.62%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQRYHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. NCBI nr
Match: KAA0065286.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 257/266 (96.62%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSR NRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRLNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQ YHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQHYHLQE 266

[Close]

BLAST of Pay0013849 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 524.6 bits (1350), Expect = 4.9e-145
Identity = 256/266 (96.24%), Postives = 259/266 (97.37%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           C QSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHIL HDVKNRVIQREFMRS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETI RHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           +RARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVD GYPNAEGFLAPYRGQRYHLQE
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. NCBI nr
Match: KAA0065736.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 254/266 (95.49%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60
           MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIH SDLV
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVIQREFMRS 120
           CRQSTRMD+RCFAILCHLLRTIAGLTSTEV DVEEMVAMFLHILAHDVKNRVIQREFMRS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPAS 180
           GETIFRHFNM+ LAVIRLH+ELLKKPQPVPNECTDQRWR FENCLGALDGTYIKVNVPAS
Sbjct: 121 GETIFRHFNMIFLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYY 240
           ++ARYRTRKGE+ATNVLGVCDTKGDFVYVLAGWEGSAADS ILRDALSRPNRLKVPKGYY
Sbjct: 181 DQARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLVDVGYPNAEGFLAPYRGQRYHLQE 267
           YLVDVGYPN EGFLAPYRGQRYHLQE
Sbjct: 241 YLVDVGYPNVEGFLAPYRGQRYHLQE 266

[Close]

BLAST of Pay0013849 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-39
Identity = 87/210 (41.43%), Postives = 124/210 (59.05%), Query Frame = 0


Query: 51  FRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKN 110
           +++++G +  C ++ RMD+  F  LC LL+T   L  T    +E  +A+FL I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 111 RVIQREFMRSGETIFRHFNMVLLAVIRLHEELLKKPQPVPNECT-DQRWRCFENCLGALD 170
           R +Q  F  SGETI RHFN VL AVI + ++     QP  N  T +     F++C+G +D
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFF---QPNSNSDTLENDDPYFKDCVGVVD 151

Query: 171 GTYIKVNVPASNRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRDALSR 230
             +I V V    +  +R   G L  NVL        F YVLAGWEGSA+D  +L  AL+R
Sbjct: 152 SFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTR 211

Query: 231 PNRLKVPKGYYYLVDVGYPNAEGFLAPYRG 260
            N+L+VP+G YY+VD  YPN  GF+APY G
Sbjct: 212 RNKLQVPQGKYYIVDNKYPNLPGFIAPYHG 238

[Close]

BLAST of Pay0013849 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 8.6e-31
Identity = 80/229 (34.93%), Postives = 113/229 (49.34%), Query Frame = 0


Query: 51  FRMIHGSDLVCRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKN 110
           +R +      C Q  RM   CF  LC++L+T   L  T    +EE VAMFL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 111 RVIQREFMRSGETIFRHFNMVLLAVIRLHEELLKKP-----QPVPNEC-TDQR-WRCFEN 170
           R +   F R+ ET+ R F  VL A   L  + ++ P       +P     DQR W  F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 171 CLGALDGTYIKVNVPASNRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADSSIL 230
            +GA+DGT++ V V    +  Y  R    + N++ +CD K  F Y+  G  GS  D+++L
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 231 RDALSRPNRLKVPKG-YYYLVDVGYPNAEGFLAPYRGQ-----RYHLQE 267
           + A    +   +P    YYLVD GYPN +G LAPYR       RYH+ +
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQ 284

[Close]

BLAST of Pay0013849 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 71/222 (31.98%), Postives = 99/222 (44.59%), Query Frame = 0


Query: 54  IHGSDLVCRQSTRMDQRCFAILCHLLRTIAGLTSTEVFDVEEMVAMFLHILAHDVKNRVI 113
           I+ +++ C+   RM    F  LC +L    GL S+    ++E VA+FL I A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 114 QREFMRSGETIFRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRCFENCLGALDGTYI 173
              F  + ETI+R F+ VL A+ RL  E ++     P +  + R                
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIR-----PRKVEELR---------------- 136

Query: 174 KVNVPASNRARYRTR--------KGELATNVLGVCDTKGDFVYVLAGWEGSAADSSILRD 233
                 SNR +  TR         G  + NVL +CD    F Y   G  GS  D+ +L  
Sbjct: 137 ----AISNRLQDDTRYWPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSA 196

Query: 234 ALSRPNRLKV-PKGYYYLVDVGYPNAEGFLAPYRGQRYHLQE 267
           A+S      V P   YYLVD GY N  G+LAPYR +    Q+
Sbjct: 197 AISDDPLFHVPPDSKYYLVDSGYANKRGYLAPYRREHREAQD 213

[Close]

BLAST of Pay0013849 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-16
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 161 FENCLGALDGTYIKVNVPASNRARYRTRKGELATNVLGVCDTKGDFVYVLAGWEGSAADS 220
           F++C+GA+D T+I   V       +R RKG+++ N+L  C+   +F+YVL+GWEGSA DS
Sbjct: 22  FKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDS 81

Query: 221 SILRDALSR-PNRLKVPK 238
            +L DAL+R  NRL VP+
Sbjct: 82  KVLNDALTRNSNRLPVPE 99

[Close]

BLAST of Pay0013849 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 206 FVYVLAGWEGSAADSSILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQ 265
           F+YVL+GWEGSA DS +L DAL +          +YLVD G+ N   FLAP+RG RYHLQ
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 75

Query: 266 E 267
           E
Sbjct: 85  E 75

The following BLAST results are available for this feature:

BLAST of Pay0013849 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0013849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDX0	2.1e-146	96.99	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TXW1	4.8e-146	96.62	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VG29	6.2e-146	96.62	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U9H2	2.4e-145	96.24	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VHB0	5.3e-145	95.49	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Pay0013849 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035620.1	4.4e-146	96.99	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0046727.1	9.8e-146	96.62	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0065286.1	1.3e-145	96.62	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051057.1	4.9e-145	96.24	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0065736.1	1.1e-144	95.49	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0013849 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.0e-39	41.43	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	8.6e-31	34.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28730.1	1.2e-19	31.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	4.6e-16	47.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	1.4e-12	55.74	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 168..259 e-value: 8.0E-12 score: 45.1
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 22..252
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 22..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013849.1	Pay0013849.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding