Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCTTTTGAAGTTGCAAAGAACATTTGGGAGCAAATCTTCAAGCCACCAAAAGGTGGAATTGTAATAAAAGAAAATCATGCGATTGACGAACACTACTCGTCCTCTAAACCCTCAAGTGAGGAAATGCCTCACCCAAATATAATGTCAGTTATGGTAGCTAACGTGGATACAAGTGAAAATAGAATGGCAAAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTGGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTCGTGATGCTTCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGACAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGAAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTCAAACTTTCTCCTTGTACTCTAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTAATGGAAAAGGCAACCCAAAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGAAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATTGTCAGCATGATGGAGTTGACAAACACAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTTTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGTAGTGGAGATGTGCACCCAAGGCATGCATTGGGGACTTCTTTATATTTTGCAGGGAATAAAACCTCGCACATTCGAAGAGTTGGCAACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGGAGCAAAAAATTTCTTGATGCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCTATGGTTGTTCATGCAACTCCGTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGGTGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCTGACTCTGATGTTGCAGACATGTTAGAGCAGCTGCTAGAGAACGAACTTATTCAGCTGCCGGAATGCAAACGATCAGAACAAGCAGGAAAAAAAGATGATCCTAACTACTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAGTAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTCAATTTGGGACTTCTGCACCTATACTTGTTCTATTCCAACAAAGGATCGTGACGATAAACTCCCAAAATAAAGAAGCGCATGGTAAAGATGATGGCGAAGGATGGATAACAGTCACTCGTCAAAAAGGGAGACAACCAAATTCCATTCAAAAGCAGTCGCGATTCCATCAAAAGTATGCAAAAGGAAGCATCTCCTATAAAAAGAAAGGAAGAAGGAACAAGAAGATGTGGAATCCTAAGCCCATAAAAGGAAAAGATGAGGACTTCCTCCAACTTCGACGATCGATAACTTTGACAGAATTCCTCCTAAGAAGTTTCCTTGAGGATCATCCAGAAGAAATACTTGAAGTCACTGCATGTCATGCTGCCAGCATAGTAGAAGTCGACAACAATTATGGATCTTCTAAAGAAGTCAACAATTCAAATGAAATTAATCAAAGGACCTCTGTCTTTGATCGTATCAAGCCTTCAACTACTCGATCTTCAGTCTTTCAAAGATTGAGTATGGTCACGAAAGAAGAGGAAAACCAATGTCCAACATTTATTTACACTCGAACTTCAACTTTCAAAAGGCTGAGTATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCGTCTAAAGATGACAAATGATCAACAACAAAGAGAGATGAAATCTTCGAAGGCAAAACCATTTCGTGAAGAAAATGATGACGATAAGATTCACAGTTGTGTCCCGTCACGCATGAAGAGGAAGTTGTTTGTTGACATAAATACAGAAGGTTCCTTGACTGTGAAACCAAGATTTATTATCTTCACCAATCCTACAAACGAAGGAGATGAACAAATTCTTGTTGAAAATAAAAGCTGTTAA
mRNA sequence
ATGCCACCTTTTGAAGTTGCAAAGAACATTTGGGAGCAAATCTTCAAGCCACCAAAAGGTGGAATTGTAATAAAAGAAAATCATGCGATTGACGAACACTACTCGTCCTCTAAACCCTCAAGTGAGGAAATGCCTCACCCAAATATAATGTCAGTTATGGTAGCTAACGTGGATACAAGTGAAAATAGAATGGCAAAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTGGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTCGTGATGCTTCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGACAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGAAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTCAAACTTTCTCCTTGTACTCTAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTAATGGAAAAGGCAACCCAAAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGAAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATTGTCAGCATGATGGAGTTGACAAACACAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTTTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGTAGTGGAGATGTGCACCCAAGGCATGCATTGGGGACTTCTTTATATTTTGCAGGGAATAAAACCTCGCACATTCGAAGAGTTGGCAACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGGAGCAAAAAATTTCTTGATGCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCTATGGTTGTTCATGCAACTCCGTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGGTGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCTGACTCTGATGTTGCAGACATGTTAGAGCAGCTGCTAGAGAACGAACTTATTCAGCTGCCGGAATGCAAACGATCAGAACAAGCAGGAAAAAAAGATGATCCTAACTACTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAGTAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTCAATTTGGGACTTCTGCACCTATACTTGTTCTATTCCAACAAAGGATCGTGACGATAAACTCCCAAAATAAAGAAGCGCATGGTAAAGATGATGGCGAAGGATGGATAACAGTCACTCGTCAAAAAGGGAGACAACCAAATTCCATTCAAAAGCAGTCGCGATTCCATCAAAAGTATGCAAAAGGAAGCATCTCCTATAAAAAGAAAGGAAGAAGGAACAAGAAGATGTGGAATCCTAAGCCCATAAAAGGAAAAGATGAGGACTTCCTCCAACTTCGACGATCGATAACTTTGACAGAATTCCTCCTAAGAAGTTTCCTTGAGGATCATCCAGAAGAAATACTTGAAGTCACTGCATGTCATGCTGCCAGCATAGTAGAAGTCGACAACAATTATGGATCTTCTAAAGAAGTCAACAATTCAAATGAAATTAATCAAAGGACCTCTGTCTTTGATCGTATCAAGCCTTCAACTACTCGATCTTCAGTCTTTCAAAGATTGAGTATGGTCACGAAAGAAGAGGAAAACCAATGTCCAACATTTATTTACACTCGAACTTCAACTTTCAAAAGGCTGAGTATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCGTCTAAAGATGACAAATGATCAACAACAAAGAGAGATGAAATCTTCGAAGGCAAAACCATTTCGTGAAGAAAATGATGACGATAAGATTCACAGTTGTGTCCCGTCACGCATGAAGAGGAAGTTGTTTGTTGACATAAATACAGAAGGTTCCTTGACTGTGAAACCAAGATTTATTATCTTCACCAATCCTACAAACGAAGGAGATGAACAAATTCTTGTTGAAAATAAAAGCTGTTAA
Coding sequence (CDS)
ATGCCACCTTTTGAAGTTGCAAAGAACATTTGGGAGCAAATCTTCAAGCCACCAAAAGGTGGAATTGTAATAAAAGAAAATCATGCGATTGACGAACACTACTCGTCCTCTAAACCCTCAAGTGAGGAAATGCCTCACCCAAATATAATGTCAGTTATGGTAGCTAACGTGGATACAAGTGAAAATAGAATGGCAAAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTGGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACATTGAAAGTCGTGATGCTTCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGACAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGAAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTCAAACTTTCTCCTTGTACTCTAAACCATATACGAAGAGGATCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTAATGGAAAAGGCAACCCAAAACAACATGTTGCTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGAAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATTGTCAGCATGATGGAGTTGACAAACACAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCAACCGATGGAGAGCTTTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGTAGTGGAGATGTGCACCCAAGGCATGCATTGGGGACTTCTTTATATTTTGCAGGGAATAAAACCTCGCACATTCGAAGAGTTGGCAACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGGAGCAAAAAATTTCTTGATGCCAAAATCGAGGAGTGACAAGAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCTATGGTTGTTCATGCAACTCCGTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTGAAAGAAAGCATGGTGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCTGACTCTGATGTTGCAGACATGTTAGAGCAGCTGCTAGAGAACGAACTTATTCAGCTGCCGGAATGCAAACGATCAGAACAAGCAGGAAAAAAAGATGATCCTAACTACTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAAGTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAGTAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAAATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTCAATTTGGGACTTCTGCACCTATACTTGTTCTATTCCAACAAAGGATCGTGACGATAAACTCCCAAAATAAAGAAGCGCATGGTAAAGATGATGGCGAAGGATGGATAACAGTCACTCGTCAAAAAGGGAGACAACCAAATTCCATTCAAAAGCAGTCGCGATTCCATCAAAAGTATGCAAAAGGAAGCATCTCCTATAAAAAGAAAGGAAGAAGGAACAAGAAGATGTGGAATCCTAAGCCCATAAAAGGAAAAGATGAGGACTTCCTCCAACTTCGACGATCGATAACTTTGACAGAATTCCTCCTAAGAAGTTTCCTTGAGGATCATCCAGAAGAAATACTTGAAGTCACTGCATGTCATGCTGCCAGCATAGTAGAAGTCGACAACAATTATGGATCTTCTAAAGAAGTCAACAATTCAAATGAAATTAATCAAAGGACCTCTGTCTTTGATCGTATCAAGCCTTCAACTACTCGATCTTCAGTCTTTCAAAGATTGAGTATGGTCACGAAAGAAGAGGAAAACCAATGTCCAACATTTATTTACACTCGAACTTCAACTTTCAAAAGGCTGAGTATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCGTCTAAAGATGACAAATGATCAACAACAAAGAGAGATGAAATCTTCGAAGGCAAAACCATTTCGTGAAGAAAATGATGACGATAAGATTCACAGTTGTGTCCCGTCACGCATGAAGAGGAAGTTGTTTGTTGACATAAATACAGAAGGTTCCTTGACTGTGAAACCAAGATTTATTATCTTCACCAATCCTACAAACGAAGGAGATGAACAAATTCTTGTTGAAAATAAAAGCTGTTAA
Protein sequence
MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQPQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKDDGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFLQLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSVFDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRLKMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFTNPTNEGDEQILVENKSC
Homology
BLAST of Pay0013756 vs. ExPASy TrEMBL
Match:
A0A5D3BX77 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00570 PE=4 SV=1)
HSP 1 Score: 1384.0 bits (3581), Expect = 0.0e+00
Identity = 713/767 (92.96%), Postives = 737/767 (96.09%), Query Frame = 0
Query: 1 MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 60
MPPFEVAKNIWEQI KPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMV NVDTS
Sbjct: 33 MPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTS 92
Query: 61 ENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQ 120
ENRMA+LEKKVNMLMKVVEERDYEIAFLKNHIESRDA+ESSHKHTVKNTDKGK VMQESQ
Sbjct: 93 ENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 152
Query: 121 PQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180
PQNSTSIASLSVQQLQ+MIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ
Sbjct: 153 PQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 212
Query: 181 QFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLE 240
QF+GKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DL+PESIDNWEQLE
Sbjct: 213 QFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDLYMDLEPESIDNWEQLE 272
Query: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQG 300
RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS VEMCTQG
Sbjct: 273 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQG 332
Query: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANS 360
MHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAK+FL+PKSRSDKNEL+DTKKIANS
Sbjct: 333 MHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDFLIPKSRSDKNELNDTKKIANS 392
Query: 361 VIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 420
VIKESMVVHATPLKSFSKRKETKIERKH GDEKRQSTLKERQEKVYPF DSDVADMLEQL
Sbjct: 393 VIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFSDSDVADMLEQL 452
Query: 421 LENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 480
LEN+LIQLP+CKR +QA K DDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIEL+ID
Sbjct: 453 LENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELNID 512
Query: 481 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKD 540
EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTS +LFQQRIVTINSQNKEAHGKD
Sbjct: 513 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTS----ILFQQRIVTINSQNKEAHGKD 572
Query: 541 DGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 600
D EGWITVTRQKGRQPNSIQK+S+FHQKYAKGSIS+KKKGRRNKKMWNPKPIKGKDEDFL
Sbjct: 573 DDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKKKGRRNKKMWNPKPIKGKDEDFL 632
Query: 601 QLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 660
QLRRSITL EFL RSFLEDHPEEILEVT CHAASIVEV+NNYGSSKEVNN NEINQRTSV
Sbjct: 633 QLRRSITLAEFLPRSFLEDHPEEILEVTTCHAASIVEVNNNYGSSKEVNNLNEINQRTSV 692
Query: 661 FDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 720
FDRIKPSTTRSSVFQRLSM TKEEENQCPTFIYTRTSTFKRLSIS SKK+RPSTSAFDRL
Sbjct: 693 FDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISASKKNRPSTSAFDRL 752
Query: 721 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTE 768
KMTNDQQQREMKS KAKPFREENDDDKIHS VPSRMKRKL VDINT+
Sbjct: 753 KMTNDQQQREMKSLKAKPFREENDDDKIHSRVPSRMKRKLPVDINTK 795
BLAST of Pay0013756 vs. ExPASy TrEMBL
Match:
A0A5A7TQK6 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00400 PE=4 SV=1)
HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 674/767 (87.87%), Postives = 705/767 (91.92%), Query Frame = 0
Query: 2 PPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSE 61
PPFEVAKNIWE+I KPPKGGIVIKEN AIDEHYSSSKPSSEEMPHPNIMSVMV NVDTSE
Sbjct: 34 PPFEVAKNIWEKISKPPKGGIVIKENPAIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSE 93
Query: 62 NRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQP 121
NRMA+LEKKVNMLMKVVEERDYEIAFLKNHIES DA+ESSHKHTVKNTDKGK VMQE QP
Sbjct: 94 NRMAELEKKVNMLMKVVEERDYEIAFLKNHIESHDAAESSHKHTVKNTDKGKAVMQEIQP 153
Query: 122 QNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQ 181
+N TSIASLSVQQLQ+MI SIKTQYGG AQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQ
Sbjct: 154 RNLTSIASLSVQQLQEMITDSIKTQYGGSAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQ 213
Query: 182 FNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLER 241
+ K T+ ++L+ ++ L PESIDNWEQLER
Sbjct: 214 WMEK-----------------ATQNNMLLTS----------SKHVKLLPESIDNWEQLER 273
Query: 242 DFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQGM 301
DFLNRFYSTRRI+SMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS VEMCTQGM
Sbjct: 274 DFLNRFYSTRRIISMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQGM 333
Query: 302 HWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANSV 361
HWGLLYILQGIKPRTF+ELATRAHDMEL++AN+GAK+FL+PK RSDKNELDDTKKIANSV
Sbjct: 334 HWGLLYILQGIKPRTFKELATRAHDMELNLANKGAKDFLIPKLRSDKNELDDTKKIANSV 393
Query: 362 IKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQLL 421
IKESMVVHATPLKSFSKRKETKIERKH GDEKRQSTLKERQEKVYPFP+SDVADMLEQLL
Sbjct: 394 IKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPNSDVADMLEQLL 453
Query: 422 ENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDE 481
EN+LIQL ECKRSEQA K DDPNYCKYHRVISHP+EKCFVLKELILKLAREKKIELDIDE
Sbjct: 454 ENQLIQLLECKRSEQARKVDDPNYCKYHRVISHPIEKCFVLKELILKLAREKKIELDIDE 513
Query: 482 VAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKDD 541
VAQTNHVAI+MTSNVPPLTQLDD+RK IQFGTSAPILVLFQQRIVTINSQNKEAHGKDD
Sbjct: 514 VAQTNHVAIKMTSNVPPLTQLDDKRKGFIQFGTSAPILVLFQQRIVTINSQNKEAHGKDD 573
Query: 542 GEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFLQ 601
GEGWITVT QKGRQPNSIQK+SRFHQKYAKGSIS+KKKGRRNKKMWNPKPIKGKDEDFLQ
Sbjct: 574 GEGWITVTHQKGRQPNSIQKESRFHQKYAKGSISHKKKGRRNKKMWNPKPIKGKDEDFLQ 633
Query: 602 LRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSVF 661
LRRSITL EFL RSFLEDHPEEILEVTACHAASIVEV+NNYGSSKEVNNSNEINQRTSVF
Sbjct: 634 LRRSITLAEFLPRSFLEDHPEEILEVTACHAASIVEVNNNYGSSKEVNNSNEINQRTSVF 693
Query: 662 DRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRLK 721
DRIKPSTTRSSVFQRLSM TKEE+NQCPTFIYTRTSTFKRLSISTSKK+RPSTSAFDRLK
Sbjct: 694 DRIKPSTTRSSVFQRLSMATKEEKNQCPTFIYTRTSTFKRLSISTSKKNRPSTSAFDRLK 753
Query: 722 MTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEG 769
MTNDQQQREMKS KAKPFREENDD KIHS +PSRMKRKL+VDINTEG
Sbjct: 754 MTNDQQQREMKSLKAKPFREENDDAKIHSRIPSRMKRKLYVDINTEG 773
BLAST of Pay0013756 vs. ExPASy TrEMBL
Match:
A0A5A7VAV4 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00190 PE=4 SV=1)
HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 677/797 (84.94%), Postives = 689/797 (86.45%), Query Frame = 0
Query: 1 MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 60
MPPFEVAKNIWEQI KPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS
Sbjct: 33 MPPFEVAKNIWEQISKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 92
Query: 61 ENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQ 120
ENRMA+LEKKVNMLMKVVEERDYEIAFLKNHIESRDA+ESSHKHTVKNTDKGK VMQESQ
Sbjct: 93 ENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 152
Query: 121 PQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180
PQNSTSIASLSVQQLQ+MIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ
Sbjct: 153 PQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 212
Query: 181 QFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLE 240
QF+GKGNPKQHVA+FIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDL+PESI+NWEQLE
Sbjct: 213 QFDGKGNPKQHVAYFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESINNWEQLE 272
Query: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQG 300
RDFLNRFYS RRI
Sbjct: 273 RDFLNRFYSIRRI----------------------------------------------- 332
Query: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANS 360
GIKPRTFEELATRAHDMELSIANRGAK+FL+PKSRSDKN+LDDTKKIANS
Sbjct: 333 ----------GIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNKLDDTKKIANS 392
Query: 361 VIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 420
VIKESMVVHATPLKSFSKRKE KIERKH GDEKRQSTLKERQEKVYPFPDSDVAD+
Sbjct: 393 VIKESMVVHATPLKSFSKRKEIKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADI---- 452
Query: 421 LENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 480
HPVEKCFVLKELILKLAREKKIELDID
Sbjct: 453 ---------------------------------HPVEKCFVLKELILKLAREKKIELDID 512
Query: 481 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKD 540
EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTS PILVLFQQRIVTINSQNKEAHGKD
Sbjct: 513 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSTPILVLFQQRIVTINSQNKEAHGKD 572
Query: 541 DGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 600
DGEGWITVTRQKGRQPN IQKQ RFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL
Sbjct: 573 DGEGWITVTRQKGRQPNFIQKQLRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 632
Query: 601 QLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 660
QLRRSITL EFL RSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTS
Sbjct: 633 QLRRSITLAEFLPRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSD 692
Query: 661 FDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 720
FDRIKPSTTRSSVFQRLSM TKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL
Sbjct: 693 FDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 735
Query: 721 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT 780
KMTNDQQQREMKSSKAKPFR+ENDDDKIHSCVPS MKRKL VDINTEGSLTVKPRFIIFT
Sbjct: 753 KMTNDQQQREMKSSKAKPFRKENDDDKIHSCVPSCMKRKLSVDINTEGSLTVKPRFIIFT 735
Query: 781 NPTNEGDEQILVENKSC 798
NPTNEGDEQILVENKSC
Sbjct: 813 NPTNEGDEQILVENKSC 735
BLAST of Pay0013756 vs. ExPASy TrEMBL
Match:
A0A5A7URH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17350G00010 PE=4 SV=1)
HSP 1 Score: 1272.3 bits (3291), Expect = 0.0e+00
Identity = 672/797 (84.32%), Postives = 684/797 (85.82%), Query Frame = 0
Query: 1 MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 60
MPPFEVAKNIWE+I KPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMV NVDTS
Sbjct: 33 MPPFEVAKNIWEKISKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTS 92
Query: 61 ENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQ 120
ENRMA+LEKKVNMLMKVVEERDYEIAFLKNHIESRDA+ESSHKHTVKNTDKGK VMQESQ
Sbjct: 93 ENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 152
Query: 121 PQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180
PQNSTSIASLSVQQLQ+MIASSIK QYGGPAQTFSLY KPYTKRIDNLRMPNGYQPPKFQ
Sbjct: 153 PQNSTSIASLSVQQLQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPNGYQPPKFQ 212
Query: 181 QFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLE 240
QF+GKGNPKQHVAHFI+TCETAGTRGDLLVKQFVRTLKGNA DWYIDL+PESIDNWEQLE
Sbjct: 213 QFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPESIDNWEQLE 272
Query: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQG 300
RDFLNRFYSTR IVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS VEMCTQG
Sbjct: 273 RDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQG 332
Query: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANS 360
MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAK+FL+PKSRSDKNELDDTKKIANS
Sbjct: 333 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANS 392
Query: 361 VIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 420
VIKESMVVHATPLKSFSKRKETKIERKH GDEKRQSTLKERQEKVYPFPDSDVADMLEQL
Sbjct: 393 VIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 452
Query: 421 LENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 480
LEN+LIQLPECKR EQAGK DDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID
Sbjct: 453 LENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 512
Query: 481 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKD 540
EVAQTNH AIEMTSN
Sbjct: 513 EVAQTNH-AIEMTSN--------------------------------------------- 572
Query: 541 DGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 600
PIKGKDEDFL
Sbjct: 573 --------------------------------------------------PIKGKDEDFL 632
Query: 601 QLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 660
QLRRSITL EFL RSFLED PEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV
Sbjct: 633 QLRRSITLAEFLPRSFLEDDPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 692
Query: 661 FDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 720
FDRIKPSTTRSSVFQRLS+ TKEEENQCPTFIYTRTST KRLSIST KKDRPSTS+FDRL
Sbjct: 693 FDRIKPSTTRSSVFQRLSVATKEEENQCPTFIYTRTSTSKRLSISTLKKDRPSTSSFDRL 733
Query: 721 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT 780
KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT
Sbjct: 753 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT 733
Query: 781 NPTNEGDEQILVENKSC 798
NPTNEGDEQILVENKSC
Sbjct: 813 NPTNEGDEQILVENKSC 733
BLAST of Pay0013756 vs. ExPASy TrEMBL
Match:
A0A5A7SUW1 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G002250 PE=4 SV=1)
HSP 1 Score: 1055.8 bits (2729), Expect = 8.8e-305
Identity = 563/796 (70.73%), Postives = 637/796 (80.03%), Query Frame = 0
Query: 4 FEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSENR 63
F + K EQ+ + PKGGI+I++N + +S S++E H ++SVM+ +V T+E
Sbjct: 37 FVLKKISLEQLIESPKGGIIIRDNPLFNNSMPASNLSNKE-SHLEVVSVMMVDV-TAEAT 96
Query: 64 MAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQP-Q 123
M ++E+K+N LMK EERD+EIA LK+ +++ ESS VK TDKGK V+QE+QP Q
Sbjct: 97 MEEMERKINFLMKNFEERDHEIAALKDQMKACKTGESSQTPVVKATDKGKNVVQENQPQQ 156
Query: 124 NSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQF 183
S S+ASLSVQQLQ MIA+SI+ QYGGP QT +YSK YTKRIDNLRMP GYQPPKFQQF
Sbjct: 157 QSVSVASLSVQQLQDMIANSIRAQYGGPPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQF 216
Query: 184 NGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLERD 243
+GKGNPKQH+AHF+ETCE AG+RGD LV+QFVR+LKGNAF+WY DL+PE
Sbjct: 217 DGKGNPKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPE----------- 276
Query: 244 FLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQGMH 303
GE VIDYINRWRALSLDCKD+LTELS VEMCTQGMH
Sbjct: 277 ------------------------GEPVIDYINRWRALSLDCKDKLTELSAVEMCTQGMH 336
Query: 304 WGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKS-RSDKNELDDTKKIANSV 363
W LLYILQGIKPRTFEEL+TRAHDMELSIAN GAK+FL+ ++ RSDKNE++DTKKIAN++
Sbjct: 337 WELLYILQGIKPRTFEELSTRAHDMELSIANIGAKDFLVQRTKRSDKNEINDTKKIANNI 396
Query: 364 IKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQLL 423
+ ESM+V TPLKSFSKRKETK ER + GDEKR+ TL+ERQ+KVYPFPDSDVADMLEQL+
Sbjct: 397 LNESMLVQETPLKSFSKRKETKHERNYDGDEKRRPTLRERQKKVYPFPDSDVADMLEQLI 456
Query: 424 ENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDE 483
E +LIQLPECKR EQAGK DDPNYCKYHRVISHPVEKCFVLKELILKLARE KIELDIDE
Sbjct: 457 EKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLARENKIELDIDE 516
Query: 484 VAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKDD 543
VAQTNHVA+ MTS+V P L DQR+SLIQFGT PILV FQQ+ +T NSQNKE +D+
Sbjct: 517 VAQTNHVAVNMTSSVLPSILLYDQRESLIQFGTFEPILVRFQQKTMTSNSQNKEETSEDE 576
Query: 544 GEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFLQ 603
GE WI VT +K RQ S+Q S FHQK++KG+IS+KKKGRRNKKMW PKPIKGKD+DF Q
Sbjct: 577 GEEWIGVTHKKERQIGSVQTNSNFHQKHSKGNISHKKKGRRNKKMWKPKPIKGKDKDFFQ 636
Query: 604 LRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSVF 663
RRSI L EFL RSFLEDHPE+ILEVTACH SIVEVDNNY S +EV+NSNEI QRT VF
Sbjct: 637 PRRSINLAEFLPRSFLEDHPEKILEVTACHTTSIVEVDNNYDSYEEVDNSNEIKQRTFVF 696
Query: 664 DRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRLK 723
RIKP T RSSVFQRLSM KEEENQCPT Y RTS FKRLSIST KKDRPSTSAFDRLK
Sbjct: 697 HRIKPLTIRSSVFQRLSMAMKEEENQCPTSTYARTSAFKRLSISTLKKDRPSTSAFDRLK 756
Query: 724 MTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFTN 783
M NDQQQREMKS K KPF EENDDDKIHS VPSRMKRKL VDINTEGSL VKPRFIIFTN
Sbjct: 757 MINDQQQREMKSLKEKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLIVKPRFIIFTN 795
Query: 784 PTNEGDEQILVENKSC 798
P NEGDE+IL ENKSC
Sbjct: 817 PINEGDEKILDENKSC 795
BLAST of Pay0013756 vs. NCBI nr
Match:
TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 1384.0 bits (3581), Expect = 0.0e+00
Identity = 713/767 (92.96%), Postives = 737/767 (96.09%), Query Frame = 0
Query: 1 MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 60
MPPFEVAKNIWEQI KPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMV NVDTS
Sbjct: 33 MPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTS 92
Query: 61 ENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQ 120
ENRMA+LEKKVNMLMKVVEERDYEIAFLKNHIESRDA+ESSHKHTVKNTDKGK VMQESQ
Sbjct: 93 ENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 152
Query: 121 PQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180
PQNSTSIASLSVQQLQ+MIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ
Sbjct: 153 PQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 212
Query: 181 QFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLE 240
QF+GKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DL+PESIDNWEQLE
Sbjct: 213 QFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDLYMDLEPESIDNWEQLE 272
Query: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQG 300
RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS VEMCTQG
Sbjct: 273 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQG 332
Query: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANS 360
MHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAK+FL+PKSRSDKNEL+DTKKIANS
Sbjct: 333 MHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDFLIPKSRSDKNELNDTKKIANS 392
Query: 361 VIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 420
VIKESMVVHATPLKSFSKRKETKIERKH GDEKRQSTLKERQEKVYPF DSDVADMLEQL
Sbjct: 393 VIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFSDSDVADMLEQL 452
Query: 421 LENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 480
LEN+LIQLP+CKR +QA K DDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIEL+ID
Sbjct: 453 LENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELNID 512
Query: 481 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKD 540
EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTS +LFQQRIVTINSQNKEAHGKD
Sbjct: 513 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTS----ILFQQRIVTINSQNKEAHGKD 572
Query: 541 DGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 600
D EGWITVTRQKGRQPNSIQK+S+FHQKYAKGSIS+KKKGRRNKKMWNPKPIKGKDEDFL
Sbjct: 573 DDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKKKGRRNKKMWNPKPIKGKDEDFL 632
Query: 601 QLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 660
QLRRSITL EFL RSFLEDHPEEILEVT CHAASIVEV+NNYGSSKEVNN NEINQRTSV
Sbjct: 633 QLRRSITLAEFLPRSFLEDHPEEILEVTTCHAASIVEVNNNYGSSKEVNNLNEINQRTSV 692
Query: 661 FDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 720
FDRIKPSTTRSSVFQRLSM TKEEENQCPTFIYTRTSTFKRLSIS SKK+RPSTSAFDRL
Sbjct: 693 FDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISASKKNRPSTSAFDRL 752
Query: 721 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTE 768
KMTNDQQQREMKS KAKPFREENDDDKIHS VPSRMKRKL VDINT+
Sbjct: 753 KMTNDQQQREMKSLKAKPFREENDDDKIHSRVPSRMKRKLPVDINTK 795
BLAST of Pay0013756 vs. NCBI nr
Match:
KAA0045440.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 674/767 (87.87%), Postives = 705/767 (91.92%), Query Frame = 0
Query: 2 PPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSE 61
PPFEVAKNIWE+I KPPKGGIVIKEN AIDEHYSSSKPSSEEMPHPNIMSVMV NVDTSE
Sbjct: 34 PPFEVAKNIWEKISKPPKGGIVIKENPAIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTSE 93
Query: 62 NRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQP 121
NRMA+LEKKVNMLMKVVEERDYEIAFLKNHIES DA+ESSHKHTVKNTDKGK VMQE QP
Sbjct: 94 NRMAELEKKVNMLMKVVEERDYEIAFLKNHIESHDAAESSHKHTVKNTDKGKAVMQEIQP 153
Query: 122 QNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQ 181
+N TSIASLSVQQLQ+MI SIKTQYGG AQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQ
Sbjct: 154 RNLTSIASLSVQQLQEMITDSIKTQYGGSAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQ 213
Query: 182 FNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLER 241
+ K T+ ++L+ ++ L PESIDNWEQLER
Sbjct: 214 WMEK-----------------ATQNNMLLTS----------SKHVKLLPESIDNWEQLER 273
Query: 242 DFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQGM 301
DFLNRFYSTRRI+SMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS VEMCTQGM
Sbjct: 274 DFLNRFYSTRRIISMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQGM 333
Query: 302 HWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANSV 361
HWGLLYILQGIKPRTF+ELATRAHDMEL++AN+GAK+FL+PK RSDKNELDDTKKIANSV
Sbjct: 334 HWGLLYILQGIKPRTFKELATRAHDMELNLANKGAKDFLIPKLRSDKNELDDTKKIANSV 393
Query: 362 IKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQLL 421
IKESMVVHATPLKSFSKRKETKIERKH GDEKRQSTLKERQEKVYPFP+SDVADMLEQLL
Sbjct: 394 IKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPNSDVADMLEQLL 453
Query: 422 ENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDE 481
EN+LIQL ECKRSEQA K DDPNYCKYHRVISHP+EKCFVLKELILKLAREKKIELDIDE
Sbjct: 454 ENQLIQLLECKRSEQARKVDDPNYCKYHRVISHPIEKCFVLKELILKLAREKKIELDIDE 513
Query: 482 VAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKDD 541
VAQTNHVAI+MTSNVPPLTQLDD+RK IQFGTSAPILVLFQQRIVTINSQNKEAHGKDD
Sbjct: 514 VAQTNHVAIKMTSNVPPLTQLDDKRKGFIQFGTSAPILVLFQQRIVTINSQNKEAHGKDD 573
Query: 542 GEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFLQ 601
GEGWITVT QKGRQPNSIQK+SRFHQKYAKGSIS+KKKGRRNKKMWNPKPIKGKDEDFLQ
Sbjct: 574 GEGWITVTHQKGRQPNSIQKESRFHQKYAKGSISHKKKGRRNKKMWNPKPIKGKDEDFLQ 633
Query: 602 LRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSVF 661
LRRSITL EFL RSFLEDHPEEILEVTACHAASIVEV+NNYGSSKEVNNSNEINQRTSVF
Sbjct: 634 LRRSITLAEFLPRSFLEDHPEEILEVTACHAASIVEVNNNYGSSKEVNNSNEINQRTSVF 693
Query: 662 DRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRLK 721
DRIKPSTTRSSVFQRLSM TKEE+NQCPTFIYTRTSTFKRLSISTSKK+RPSTSAFDRLK
Sbjct: 694 DRIKPSTTRSSVFQRLSMATKEEKNQCPTFIYTRTSTFKRLSISTSKKNRPSTSAFDRLK 753
Query: 722 MTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEG 769
MTNDQQQREMKS KAKPFREENDD KIHS +PSRMKRKL+VDINTEG
Sbjct: 754 MTNDQQQREMKSLKAKPFREENDDAKIHSRIPSRMKRKLYVDINTEG 773
BLAST of Pay0013756 vs. NCBI nr
Match:
KAA0065303.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 677/797 (84.94%), Postives = 689/797 (86.45%), Query Frame = 0
Query: 1 MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 60
MPPFEVAKNIWEQI KPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS
Sbjct: 33 MPPFEVAKNIWEQISKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 92
Query: 61 ENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQ 120
ENRMA+LEKKVNMLMKVVEERDYEIAFLKNHIESRDA+ESSHKHTVKNTDKGK VMQESQ
Sbjct: 93 ENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 152
Query: 121 PQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180
PQNSTSIASLSVQQLQ+MIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ
Sbjct: 153 PQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 212
Query: 181 QFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLE 240
QF+GKGNPKQHVA+FIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDL+PESI+NWEQLE
Sbjct: 213 QFDGKGNPKQHVAYFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESINNWEQLE 272
Query: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQG 300
RDFLNRFYS RRI
Sbjct: 273 RDFLNRFYSIRRI----------------------------------------------- 332
Query: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANS 360
GIKPRTFEELATRAHDMELSIANRGAK+FL+PKSRSDKN+LDDTKKIANS
Sbjct: 333 ----------GIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNKLDDTKKIANS 392
Query: 361 VIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 420
VIKESMVVHATPLKSFSKRKE KIERKH GDEKRQSTLKERQEKVYPFPDSDVAD+
Sbjct: 393 VIKESMVVHATPLKSFSKRKEIKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADI---- 452
Query: 421 LENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 480
HPVEKCFVLKELILKLAREKKIELDID
Sbjct: 453 ---------------------------------HPVEKCFVLKELILKLAREKKIELDID 512
Query: 481 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKD 540
EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTS PILVLFQQRIVTINSQNKEAHGKD
Sbjct: 513 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSTPILVLFQQRIVTINSQNKEAHGKD 572
Query: 541 DGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 600
DGEGWITVTRQKGRQPN IQKQ RFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL
Sbjct: 573 DGEGWITVTRQKGRQPNFIQKQLRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 632
Query: 601 QLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 660
QLRRSITL EFL RSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTS
Sbjct: 633 QLRRSITLAEFLPRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSD 692
Query: 661 FDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 720
FDRIKPSTTRSSVFQRLSM TKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL
Sbjct: 693 FDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 735
Query: 721 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT 780
KMTNDQQQREMKSSKAKPFR+ENDDDKIHSCVPS MKRKL VDINTEGSLTVKPRFIIFT
Sbjct: 753 KMTNDQQQREMKSSKAKPFRKENDDDKIHSCVPSCMKRKLSVDINTEGSLTVKPRFIIFT 735
Query: 781 NPTNEGDEQILVENKSC 798
NPTNEGDEQILVENKSC
Sbjct: 813 NPTNEGDEQILVENKSC 735
BLAST of Pay0013756 vs. NCBI nr
Match:
KAA0056121.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 1272.3 bits (3291), Expect = 0.0e+00
Identity = 672/797 (84.32%), Postives = 684/797 (85.82%), Query Frame = 0
Query: 1 MPPFEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTS 60
MPPFEVAKNIWE+I KPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMV NVDTS
Sbjct: 33 MPPFEVAKNIWEKISKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVTNVDTS 92
Query: 61 ENRMAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQ 120
ENRMA+LEKKVNMLMKVVEERDYEIAFLKNHIESRDA+ESSHKHTVKNTDKGK VMQESQ
Sbjct: 93 ENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQ 152
Query: 121 PQNSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQ 180
PQNSTSIASLSVQQLQ+MIASSIK QYGGPAQTFSLY KPYTKRIDNLRMPNGYQPPKFQ
Sbjct: 153 PQNSTSIASLSVQQLQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPNGYQPPKFQ 212
Query: 181 QFNGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLE 240
QF+GKGNPKQHVAHFI+TCETAGTRGDLLVKQFVRTLKGNA DWYIDL+PESIDNWEQLE
Sbjct: 213 QFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPESIDNWEQLE 272
Query: 241 RDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQG 300
RDFLNRFYSTR IVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS VEMCTQG
Sbjct: 273 RDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQG 332
Query: 301 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKSRSDKNELDDTKKIANS 360
MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAK+FL+PKSRSDKNELDDTKKIANS
Sbjct: 333 MHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANS 392
Query: 361 VIKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 420
VIKESMVVHATPLKSFSKRKETKIERKH GDEKRQSTLKERQEKVYPFPDSDVADMLEQL
Sbjct: 393 VIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQL 452
Query: 421 LENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 480
LEN+LIQLPECKR EQAGK DDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID
Sbjct: 453 LENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDID 512
Query: 481 EVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKD 540
EVAQTNH AIEMTSN
Sbjct: 513 EVAQTNH-AIEMTSN--------------------------------------------- 572
Query: 541 DGEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFL 600
PIKGKDEDFL
Sbjct: 573 --------------------------------------------------PIKGKDEDFL 632
Query: 601 QLRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 660
QLRRSITL EFL RSFLED PEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV
Sbjct: 633 QLRRSITLAEFLPRSFLEDDPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSV 692
Query: 661 FDRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRL 720
FDRIKPSTTRSSVFQRLS+ TKEEENQCPTFIYTRTST KRLSIST KKDRPSTS+FDRL
Sbjct: 693 FDRIKPSTTRSSVFQRLSVATKEEENQCPTFIYTRTSTSKRLSISTLKKDRPSTSSFDRL 733
Query: 721 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT 780
KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT
Sbjct: 753 KMTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFT 733
Query: 781 NPTNEGDEQILVENKSC 798
NPTNEGDEQILVENKSC
Sbjct: 813 NPTNEGDEQILVENKSC 733
BLAST of Pay0013756 vs. NCBI nr
Match:
KAA0033746.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 1055.8 bits (2729), Expect = 1.8e-304
Identity = 563/796 (70.73%), Postives = 637/796 (80.03%), Query Frame = 0
Query: 4 FEVAKNIWEQIFKPPKGGIVIKENHAIDEHYSSSKPSSEEMPHPNIMSVMVANVDTSENR 63
F + K EQ+ + PKGGI+I++N + +S S++E H ++SVM+ +V T+E
Sbjct: 37 FVLKKISLEQLIESPKGGIIIRDNPLFNNSMPASNLSNKE-SHLEVVSVMMVDV-TAEAT 96
Query: 64 MAKLEKKVNMLMKVVEERDYEIAFLKNHIESRDASESSHKHTVKNTDKGKTVMQESQP-Q 123
M ++E+K+N LMK EERD+EIA LK+ +++ ESS VK TDKGK V+QE+QP Q
Sbjct: 97 MEEMERKINFLMKNFEERDHEIAALKDQMKACKTGESSQTPVVKATDKGKNVVQENQPQQ 156
Query: 124 NSTSIASLSVQQLQKMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQF 183
S S+ASLSVQQLQ MIA+SI+ QYGGP QT +YSK YTKRIDNLRMP GYQPPKFQQF
Sbjct: 157 QSVSVASLSVQQLQDMIANSIRAQYGGPPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQF 216
Query: 184 NGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLKPESIDNWEQLERD 243
+GKGNPKQH+AHF+ETCE AG+RGD LV+QFVR+LKGNAF+WY DL+PE
Sbjct: 217 DGKGNPKQHIAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPE----------- 276
Query: 244 FLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSVVEMCTQGMH 303
GE VIDYINRWRALSLDCKD+LTELS VEMCTQGMH
Sbjct: 277 ------------------------GEPVIDYINRWRALSLDCKDKLTELSAVEMCTQGMH 336
Query: 304 WGLLYILQGIKPRTFEELATRAHDMELSIANRGAKNFLMPKS-RSDKNELDDTKKIANSV 363
W LLYILQGIKPRTFEEL+TRAHDMELSIAN GAK+FL+ ++ RSDKNE++DTKKIAN++
Sbjct: 337 WELLYILQGIKPRTFEELSTRAHDMELSIANIGAKDFLVQRTKRSDKNEINDTKKIANNI 396
Query: 364 IKESMVVHATPLKSFSKRKETKIERKHGGDEKRQSTLKERQEKVYPFPDSDVADMLEQLL 423
+ ESM+V TPLKSFSKRKETK ER + GDEKR+ TL+ERQ+KVYPFPDSDVADMLEQL+
Sbjct: 397 LNESMLVQETPLKSFSKRKETKHERNYDGDEKRRPTLRERQKKVYPFPDSDVADMLEQLI 456
Query: 424 ENELIQLPECKRSEQAGKKDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDE 483
E +LIQLPECKR EQAGK DDPNYCKYHRVISHPVEKCFVLKELILKLARE KIELDIDE
Sbjct: 457 EKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLARENKIELDIDE 516
Query: 484 VAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSAPILVLFQQRIVTINSQNKEAHGKDD 543
VAQTNHVA+ MTS+V P L DQR+SLIQFGT PILV FQQ+ +T NSQNKE +D+
Sbjct: 517 VAQTNHVAVNMTSSVLPSILLYDQRESLIQFGTFEPILVRFQQKTMTSNSQNKEETSEDE 576
Query: 544 GEGWITVTRQKGRQPNSIQKQSRFHQKYAKGSISYKKKGRRNKKMWNPKPIKGKDEDFLQ 603
GE WI VT +K RQ S+Q S FHQK++KG+IS+KKKGRRNKKMW PKPIKGKD+DF Q
Sbjct: 577 GEEWIGVTHKKERQIGSVQTNSNFHQKHSKGNISHKKKGRRNKKMWKPKPIKGKDKDFFQ 636
Query: 604 LRRSITLTEFLLRSFLEDHPEEILEVTACHAASIVEVDNNYGSSKEVNNSNEINQRTSVF 663
RRSI L EFL RSFLEDHPE+ILEVTACH SIVEVDNNY S +EV+NSNEI QRT VF
Sbjct: 637 PRRSINLAEFLPRSFLEDHPEKILEVTACHTTSIVEVDNNYDSYEEVDNSNEIKQRTFVF 696
Query: 664 DRIKPSTTRSSVFQRLSMVTKEEENQCPTFIYTRTSTFKRLSISTSKKDRPSTSAFDRLK 723
RIKP T RSSVFQRLSM KEEENQCPT Y RTS FKRLSIST KKDRPSTSAFDRLK
Sbjct: 697 HRIKPLTIRSSVFQRLSMAMKEEENQCPTSTYARTSAFKRLSISTLKKDRPSTSAFDRLK 756
Query: 724 MTNDQQQREMKSSKAKPFREENDDDKIHSCVPSRMKRKLFVDINTEGSLTVKPRFIIFTN 783
M NDQQQREMKS K KPF EENDDDKIHS VPSRMKRKL VDINTEGSL VKPRFIIFTN
Sbjct: 757 MINDQQQREMKSLKEKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLIVKPRFIIFTN 795
Query: 784 PTNEGDEQILVENKSC 798
P NEGDE+IL ENKSC
Sbjct: 817 PINEGDEKILDENKSC 795
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BX77 | 0.0e+00 | 92.96 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A5A7TQK6 | 0.0e+00 | 87.87 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... | [more] |
A0A5A7VAV4 | 0.0e+00 | 84.94 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... | [more] |
A0A5A7URH1 | 0.0e+00 | 84.32 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7SUW1 | 8.8e-305 | 70.73 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... | [more] |
Match Name | E-value | Identity | Description | |
TYK03695.1 | 0.0e+00 | 92.96 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
KAA0045440.1 | 0.0e+00 | 87.87 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
KAA0065303.1 | 0.0e+00 | 84.94 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
KAA0056121.1 | 0.0e+00 | 84.32 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0033746.1 | 1.8e-304 | 70.73 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |