Pay0013726 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013726
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	40S ribosomal protein S14
Location	chr12: 21712328 .. 21714823 (+)
RNA-Seq Expression	Pay0013726
Synteny	Pay0013726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCATCCACCATGGAAAACCCTAGTCCCCCTCTCCCTTTCATATAAATTTTGCATTACATTCTTCTACCTTTCTCCTTGCACGATTTCTGCAGCGGCAAATTCTCGTAGAGCTCCACAAAGGGGAAGCTACTTCGGCCATCTTTTTCGTAAACATGGTGAGTACATCTGATCTCTCTGGTTGGCTTCTTCAATTGCGGTTCTTGTCGGCTTTTTCAATCACCATGCCAATGGTGGTCGGTCTAGTATGGATTTGCGAAGAAGTGTTTTGAATCTCTTTTGTTCAACACTTCGAATGCCGTCATTAAGGTTCTTCCGTCTCTGTTTCAAGATTTTGTTGCTAATAGCGTAGTATGAAATCCGGAGTTTAATAGGTCGTATGATTATATGATTATCGTGATTAATACTCATTATCCAGGATATTAGGCTATTCGGTATGCTCTCTACCGTTTTTTGAAATTTAGGGTTTAGTCAGTGGTGGGATATAGTAGATTGGGAGTGGATTTGAGCTTTTAAGCTGTGTGGTTTGGAGTCTATTGTTAATAATATGTACCTCTACTTTGTCTGTTCAGCAGAGGCAGAGATGACCTATATTTATTTGACCTATATTTATTTATGGGTTTTTGTTCATTTGTGTTTTTTGCTTTATGATTCTTCTCAGCCTCCTATGGTTACTTAGTGACTGGCATTATGTTTCAGCATGAGAATCTGTTGAATGGAGGAATCTTTACTTTGCTTTTGTTTTTTGTTGGATTTCGTAGTCTGGTTCAAGGAGGAAGACCAGGGAGCCTAAGGAAGAGACTGTGACTCTTGGTCCTGCAGTGAGGGAAGGCGAGCATGTGTTCGGTGTGGCTCACATTTTTGCCTCGTTTAACGATACATTTATTGTAAGTGAAAAAATGTACATAGTTTTGGTTTCTCGTTGGGTAACAGAATGATGACTTTGTTGTTTCAACCACAGCATGTGACTGATCTTTCTGGAAGGGAAACTCTTGTCCGCATTACAGGTGAAACAATTAAATACGTTTCTTCCTTCTTTAAATAGTTGAAATATGGAATTTTTTAAACTTTAAATTTGAGATCTCTCTATTTCTTAGTTTTTGTTCCTTCCATTGTGTAATTTCATTGATTGTTCCATGTAACTAAGTAAAATTAATACTAACTGTAGAGAACCATTAGAATTCATTGTCTAGAGTAGATGAGTATGAAAACCTTCTGCATTTATGAATATGATGTATGATATTAGATTGTAATTTCCTGTTAAATCTCTATGCTCACTTCAGAGCTCGTTTGTGCCTGTTTATGGAACACTACTAAAAAAGTTATGCTTTATTTCTTCTTATTTTTCTTATTATTTATATTATTTTATTTTTCACGTGGAATTTGGAAAGTTTAATTCTGTATTTTGATGAACGCAGGTGGTATGAAGGTGAAAGCTGATAGGGATGAGTCCTCCCCCTACGCAGCTATGCTTGCAGCACAGGATGTTTCCCAAAGATGCAAGGTTCCATCCTCTTTTAATATTGTTTCTTAATTACCCTTTCCCCTCATTTTATGGATTGTAATCTTTGTACTTGGCGGACTCTAATAATTTCCTTTGGAATTTATTTCATCCCATTTTATTATTTCACCTGTACGGTTTGTCAACTTTCTCACACTGAACAACATTACTTGTCTGTGGCGTGATATCTTTCACGAAACAGGAACTCGGTATTACTGCTCTTCATATTAAACTGCGTGCTACCGGAGGAAACAAGACCAAAACACCTGGTCCAGGTGCCCAATCTGCACTACGTGCTCTTGCTCGTTCTGGGATGAGGATTGGACGCATAGGTGAATCCTTGGTCCCTCTACGTTGATGAATTCAAGCTCTAAATACATGAATGCTTTACATTCTCACAACTTTGCCTAATACTTTATTAGTTGTTAATCTAACTCATATGCTTTCTTTATATGCTCCAGAGGATGTGACTCCAATTCCAACAGACAGCACTCGCCGAAAGGGTGGAAGAAGAGGAAGAAGGCTGTAAGCTTTACTTACTCCGGGATTCCTACTATTATGGCTGTGTCGATGGTTTCTCTATGGTTCTGATGCTCCTTAAGCTTTGCAGCCTTAGTTTTTCAGAACTCCAACTTGGTTTTTAATTATTGTTTTGTCAGGGATGTTTTGTCTTCGATTTTGTTTTATGTTGAACTTAGACTGTGAAAGAGGAATTTTTGGCTTTAGATTAACAAATCAATACAATGCCCTTTGGTCTTAATTATTATTGAAAGAGAATGGTGCGATGATGTCCAATCCCATGAATTATTTTTATATACATCTTAGTTGGTTTTATGCTGTCAAGTTGAATTCAAAGTCCTTTAATTTGGTGTGCTAGGTTTTGTAGTAGTTTAGGGTTTGTTTGGGGGAGAATTTGAAAACACGGATTCTTGATATTAAGATGAACATTATATAGCGTGTGATGTATAAATATGGAACTGTTTTCTGTATTCATT

mRNA sequence

AAATCATCCACCATGGAAAACCCTAGTCCCCCTCTCCCTTTCATATAAATTTTGCATTACATTCTTCTACCTTTCTCCTTGCACGATTTCTGCAGCGGCAAATTCTCGTAGAGCTCCACAAAGGGGAAGCTACTTCGGCCATCTTTTTCGTAAACATGTCTGGTTCAAGGAGGAAGACCAGGGAGCCTAAGGAAGAGACTGTGACTCTTGGTCCTGCAGTGAGGGAAGGCGAGCATGTGTTCGGTGTGGCTCACATTTTTGCCTCGTTTAACGATACATTTATTCATGTGACTGATCTTTCTGGAAGGGAAACTCTTGTCCGCATTACAGGTGGTATGAAGGTGAAAGCTGATAGGGATGAGTCCTCCCCCTACGCAGCTATGCTTGCAGCACAGGATGTTTCCCAAAGATGCAAGGAACTCGGTATTACTGCTCTTCATATTAAACTGCGTGCTACCGGAGGAAACAAGACCAAAACACCTGGTCCAGGTGCCCAATCTGCACTACGTGCTCTTGCTCGTTCTGGGATGAGGATTGGACGCATAGAGGATGTGACTCCAATTCCAACAGACAGCACTCGCCGAAAGGGTGGAAGAAGAGGAAGAAGGCTGTAAGCTTTACTTACTCCGGGATTCCTACTATTATGGCTGTGTCGATGGTTTCTCTATGGTTCTGATGCTCCTTAAGCTTTGCAGCCTTAGTTTTTCAGAACTCCAACTTGGTTTTTAATTATTGTTTTGTCAGGGATGTTTTGTCTTCGATTTTGTTTTATGTTGAACTTAGACTGTGAAAGAGGAATTTTTGGCTTTAGATTAACAAATCAATACAATGCCCTTTGGTCTTAATTATTATTGAAAGAGAATGGTGCGATGATGTCCAATCCCATGAATTATTTTTATATACATCTTAGTTGGTTTTATGCTGTCAAGTTGAATTCAAAGTCCTTTAATTTGGTGTGCTAGGTTTTGTAGTAGTTTAGGGTTTGTTTGGGGGAGAATTTGAAAACACGGATTCTTGATATTAAGATGAACATTATATAGCGTGTGATGTATAAATATGGAACTGTTTTCTGTATTCATT

Coding sequence (CDS)

ATGTCTGGTTCAAGGAGGAAGACCAGGGAGCCTAAGGAAGAGACTGTGACTCTTGGTCCTGCAGTGAGGGAAGGCGAGCATGTGTTCGGTGTGGCTCACATTTTTGCCTCGTTTAACGATACATTTATTCATGTGACTGATCTTTCTGGAAGGGAAACTCTTGTCCGCATTACAGGTGGTATGAAGGTGAAAGCTGATAGGGATGAGTCCTCCCCCTACGCAGCTATGCTTGCAGCACAGGATGTTTCCCAAAGATGCAAGGAACTCGGTATTACTGCTCTTCATATTAAACTGCGTGCTACCGGAGGAAACAAGACCAAAACACCTGGTCCAGGTGCCCAATCTGCACTACGTGCTCTTGCTCGTTCTGGGATGAGGATTGGACGCATAGAGGATGTGACTCCAATTCCAACAGACAGCACTCGCCGAAAGGGTGGAAGAAGAGGAAGAAGGCTGTAA

Protein sequence

MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL

Homology

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BLAST of Pay0013726 vs. ExPASy Swiss-Prot
Match: P19951 (40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 2.7e-74
Identity = 144/152 (94.74%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSG R+KTREPKEE V LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSG-RKKTREPKEENV-LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLA+QDV+QRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGM+IGRIEDVTP+PTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. ExPASy Swiss-Prot
Match: Q9CAX6 (40S ribosomal protein S14-2 OS=Arabidopsis thaliana OX=3702 GN=RPS14B PE=1 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.6e-74
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK ETVTLGP+VREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. ExPASy Swiss-Prot
Match: P42036 (40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-73
Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK E VTLGPAVREGE VFGV H+FASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. ExPASy Swiss-Prot
Match: P19950 (40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-73
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           SRRKTREPKEE V LGP VREGE VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SRRKTREPKEENV-LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTP+PTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPVPTDSTRRKGGRRGRRL 149

[Close]

BLAST of Pay0013726 vs. ExPASy Swiss-Prot
Match: Q9SIH0 (40S ribosomal protein S14-1 OS=Arabidopsis thaliana OX=3702 GN=RPS14A PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-73
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK + VTLGP+VREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. ExPASy TrEMBL
Match: A0A6J1KQN4 (40S ribosomal protein S14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111495605 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 152

[Close]

BLAST of Pay0013726 vs. ExPASy TrEMBL
Match: A0A6J1GTR2 (40S ribosomal protein S14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111456878 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 152

[Close]

BLAST of Pay0013726 vs. ExPASy TrEMBL
Match: A0A1S3B9H6 (40S ribosomal protein S14-2-like OS=Cucumis melo OX=3656 GN=LOC103487470 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 152

[Close]

BLAST of Pay0013726 vs. ExPASy TrEMBL
Match: A0A6J1J4Y9 (40S ribosomal protein S14-2 OS=Cucurbita maxima OX=3661 GN=LOC111481789 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.6e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. ExPASy TrEMBL
Match: A0A0A0LGP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777590 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.6e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. NCBI nr
Match: KAG7012516.1 (40S ribosomal protein S14-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 39  MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 98

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 99  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 158

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 159 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 190

[Close]

BLAST of Pay0013726 vs. NCBI nr
Match: KAG6573353.1 (hypothetical protein SDJN03_27240, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 152

[Close]

BLAST of Pay0013726 vs. NCBI nr
Match: KAG6583920.1 (hypothetical protein SDJN03_19852, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 34  MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 93

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 94  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 153

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 154 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 185

[Close]

BLAST of Pay0013726 vs. NCBI nr
Match: XP_004147409.1 (40S ribosomal protein S14-2 [Cucumis sativus] >XP_008444025.1 PREDICTED: 40S ribosomal protein S14-2-like [Cucumis melo] >XP_022927553.1 40S ribosomal protein S14-2-like [Cucurbita moschata] >XP_022954699.1 40S ribosomal protein S14-2-like [Cucurbita moschata] >XP_022994931.1 40S ribosomal protein S14-2-like [Cucurbita maxima] >XP_022994932.1 40S ribosomal protein S14-2-like [Cucurbita maxima] >XP_023001483.1 40S ribosomal protein S14-2-like [Cucurbita maxima] >XP_023519745.1 40S ribosomal protein S14-2-like [Cucurbita pepo subsp. pepo] >XP_023542964.1 40S ribosomal protein S14-2-like [Cucurbita pepo subsp. pepo] >KAE8653195.1 hypothetical protein Csa_020022 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 152

[Close]

BLAST of Pay0013726 vs. NCBI nr
Match: XP_038893713.1 (40S ribosomal protein S14-2-like [Benincasa hispida])

HSP 1 Score: 297.4 bits (760), Expect = 7.2e-77
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 121 ARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 152

[Close]

BLAST of Pay0013726 vs. TAIR 10
Match: AT3G11510.1 (Ribosomal protein S11 family protein )

HSP 1 Score: 278.5 bits (711), Expect = 3.2e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK ETVTLGP+VREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. TAIR 10
Match: AT3G52580.1 (Ribosomal protein S11 family protein )

HSP 1 Score: 277.3 bits (708), Expect = 7.2e-75
Identity = 138/149 (92.62%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK E VTLGPAVREGE VFGV H+FASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. TAIR 10
Match: AT2G36160.1 (Ribosomal protein S11 family protein )

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-74
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK + VTLGP+VREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIEDVTPIPTDSTRRKGGRRGRRL 153
           GM+IGRIEDVTPIPTDSTRRKGGRRGRRL
Sbjct: 122 GMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150

[Close]

BLAST of Pay0013726 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 )

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-11
Identity = 47/146 (32.19%), Postives = 70/146 (47.95%), Query Frame = 0


Query: 3   GSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 62
           GSR+ TR    + V   P         GV H+ ASFN+T + VTD+ GR       G   
Sbjct: 9   GSRKNTRSGSRKNVRRIPK--------GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 68

Query: 63  VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 122
            +  R   +P+AA  AA +  +   + G+    +++        K PG G  +ALRA+ R
Sbjct: 69  FRGTR-RGTPFAAQTAAGNAIRAVVDQGMQRAEVRI--------KGPGLGRDAALRAIRR 128

Query: 123 SGMRIGRIEDVTPIPTDSTRRKGGRR 149
           SG+ +  + DVTP+P +  R    RR
Sbjct: 129 SGILLSFVRDVTPMPHNGCRPPKKRR 137

The following BLAST results are available for this feature:

BLAST of Pay0013726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19951	2.7e-74	94.74	40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1	[more]
Q9CAX6	4.6e-74	93.29	40S ribosomal protein S14-2 OS=Arabidopsis thaliana OX=3702 GN=RPS14B PE=1 SV=1	[more]
P42036	1.0e-73	92.62	40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2	[more]
P19950	1.7e-73	95.30	40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1	[more]
Q9SIH0	3.9e-73	91.95	40S ribosomal protein S14-1 OS=Arabidopsis thaliana OX=3702 GN=RPS14A PE=1 SV=1	[more]

BLAST of Pay0013726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQN4	1.6e-77	100.00	40S ribosomal protein S14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111495605 PE=...	[more]
A0A6J1GTR2	1.6e-77	100.00	40S ribosomal protein S14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111456878 P...	[more]
A0A1S3B9H6	1.6e-77	100.00	40S ribosomal protein S14-2-like OS=Cucumis melo OX=3656 GN=LOC103487470 PE=3 SV...	[more]
A0A6J1J4Y9	8.6e-76	100.00	40S ribosomal protein S14-2 OS=Cucurbita maxima OX=3661 GN=LOC111481789 PE=3 SV=...	[more]
A0A0A0LGP6	8.6e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777590 PE=3 SV=1	[more]

BLAST of Pay0013726 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012516.1	3.2e-77	100.00	40S ribosomal protein S14-2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6573353.1	3.2e-77	100.00	hypothetical protein SDJN03_27240, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6583920.1	3.2e-77	100.00	hypothetical protein SDJN03_19852, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004147409.1	3.2e-77	100.00	40S ribosomal protein S14-2 [Cucumis sativus] >XP_008444025.1 PREDICTED: 40S rib...	[more]
XP_038893713.1	7.2e-77	99.34	40S ribosomal protein S14-2-like [Benincasa hispida]	[more]

BLAST of Pay0013726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11510.1	3.2e-75	93.29	Ribosomal protein S11 family protein	[more]
AT3G52580.1	7.2e-75	92.62	Ribosomal protein S11 family protein	[more]
AT2G36160.1	2.7e-74	91.95	Ribosomal protein S11 family protein	[more]
ATCG00750.1	3.3e-11	32.19	ribosomal protein S11	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 3..152 e-value: 3.0E-70 score: 237.0
IPR001971	Ribosomal protein S11	PIRSF	PIRSF002131	RPS11p_RPS11a_RPS14e_RPS11o	coord: 2..149 e-value: 3.5E-37 score: 125.3
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 30..148 e-value: 1.1E-47 score: 161.0
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 3..152
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 5..149 score: 20.885508
None	No IPR available	PANTHER	PTHR11759:SF37	BNAA05G27530D PROTEIN	coord: 3..152
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 25..150
IPR018102	Ribosomal S11, conserved site	PROSITE	PS00054	RIBOSOMAL_S11	coord: 117..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013726.1	Pay0013726.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0048027	mRNA 5'-UTR binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome