Pay0013647 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013647
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Integrase
Location	chr12: 3629206 .. 3629688 (-)
RNA-Seq Expression	Pay0013647
Synteny	Pay0013647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAA

mRNA sequence

ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAA

Coding sequence (CDS)

ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAA

Protein sequence

MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKLYGFGGC

Homology

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BLAST of Pay0013647 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.6e-31
Identity = 71/154 (46.10%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPD+ +AV+ LS++M 
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMH 1257

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
             P   HW A KRVLRY+ GT + GI+ KK +   L  + D+DW G+ DD+ ST+GY+  +
Sbjct: 1258 MPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYL 1317

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL 155
            G    SW+SKKQ  V  S+TEAEY S+A    +L
Sbjct: 1318 GHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEL 1351

[Close]

BLAST of Pay0013647 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30
Identity = 71/148 (47.97%), Postives = 93/148 (62.84%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPDI +AV+ LS+FM 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
             P   H +A KR+LRY+ GT N GI+ KK +   L  + D+DW G+ DD+ ST+GY+  +
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLA 149
            G    SW+SKKQ  V  S+TEAEY S+A
Sbjct: 1335 GHHPISWSSKKQKGVVRSSTEAEYRSVA 1362

[Close]

BLAST of Pay0013647 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 70/153 (45.75%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPDILFAVS 60
            M+NA P +TP+  +LKL K      V+         Y S VGSLMY +  TRPDI  AV 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   MLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKST 120
            ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ +L G+ D+D  G++D+ KS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSS 1194

Query: 121  SGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS 147
            +GY+F+   G  SW SK Q  VALSTTEAEYI+
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIA 1226

[Close]

BLAST of Pay0013647 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 57/119 (47.90%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 31  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK 90
           Y S VG++MYL   TRPD+  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 91  VSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLA 149
              + L G+ D+DW G+V+  +STSGY+F +  G  SW SKKQ  VALS+TE EY++L+
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALS 124

[Close]

BLAST of Pay0013647 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0


Query: 1   MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
           M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ + M 
Sbjct: 71  MLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +ST+G+   +
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 GSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL 155
           G  + SW++K+Q  V+ S+TE EY +LA    +L
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALALTAAEL 223

[Close]

BLAST of Pay0013647 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. ExPASy TrEMBL
Match: A0A5D3D538 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
           MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 45  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 104

Query: 61  NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
           NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 105 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 164

Query: 121 GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
           GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 165 GSGVFSWTSKKQSVVALSTTEAEYISLAA 193

[Close]

BLAST of Pay0013647 vs. ExPASy TrEMBL
Match: A0A5D3CXM6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1565 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1624

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1625 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1684

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1685 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1713

[Close]

BLAST of Pay0013647 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 1100 MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 1159

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 1160 NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1219

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1220 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1248

[Close]

BLAST of Pay0013647 vs. NCBI nr
Match: KAA0048003.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1    MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
            MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT
Sbjct: 885  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 944

Query: 61   NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSM
Sbjct: 945  NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM 1004

Query: 121  GSGVFSWTSKKQSVVALSTTEAEYISLAA 150
            GSGVFSWTSKKQSVVALSTTEAEYISLAA
Sbjct: 1005 GSGVFSWTSKKQSVVALSTTEAEYISLAA 1033

[Close]

BLAST of Pay0013647 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0


Query: 1   MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMT 60
           M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ + M 
Sbjct: 71  MLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  NPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSM 120
            P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +ST+G+   +
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 GSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL 155
           G  + SW++K+Q  V+ S+TE EY +LA    +L
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALALTAAEL 223

[Close]

BLAST of Pay0013647 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 6   PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRS 65
           P + PMD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS+F   P+ +
Sbjct: 353 PSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLA 412

Query: 66  HWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVF 125
           H +A  ++L YI GT+  G++Y   +E  L  F D+ +    D  +ST+GY   +G+ + 
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472

Query: 126 SWTSKKQSVVALSTTEAEYISLA 149
           SW SKKQ VV+ S+ EAEY +L+
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALS 495

[Close]

BLAST of Pay0013647 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 39  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGF 98
           MYLT TRPD+ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  L  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  CDSDWGGNVDDHKSTSGY 117
            DSDW    D  +S +G+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of Pay0013647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	6.6e-31	46.10	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.1e-30	47.97	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	1.4e-28	45.75	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	2.2e-26	47.90	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P92519	1.8e-25	40.26	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0013647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	8.8e-79	99.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	8.8e-79	99.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	8.8e-79	99.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5D3D538	8.8e-79	99.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=...	[more]
A0A5D3CXM6	8.8e-79	99.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=...	[more]

BLAST of Pay0013647 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	1.8e-78	99.33	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	1.8e-78	99.33	integrase [Cucumis melo var. makuwa]	[more]
KAA0039947.1	1.8e-78	99.33	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	1.8e-78	99.33	integrase [Cucumis melo var. makuwa]	[more]
KAA0048003.1	1.8e-78	99.33	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Pay0013647 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	1.3e-26	40.26	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	1.1e-25	41.26	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	1.8e-12	41.03	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 17..147
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 17..147
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 97..148 e-value: 3.68023E-30 score: 104.858
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 24..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013647.1	Pay0013647.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding