Pay0013441 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013441
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr06: 31542575 .. 31547356 (-)
RNA-Seq Expression	Pay0013441
Synteny	Pay0013441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATTTGTTAGTCACCAAAGTGGCCAAATTAGTAAGTTCAATAGATATCAAATTAAGGTTAAACTCAATTACTCCTATTTATGTGATGATGATGAATTATTTTATATTATGAAAAATAAAGATGTTATTATGAGTATATTGATTTTTATTATTATAAAACTTTTAAATTGCCCAAAAGTAATTAGTAGTTTTATAATTTTGAATCTTATTATGATTAATTGAAATTGTTTTATCATGATGCCTATGTTATGAACAATTTGTTAGTCACCAAAGTGGCCAAATTAGTAGATCTTTAGACATCAAATTAAGATTGATTCAATTACTCATGTCTATTTGATGCTAATGAATGAGATAATATTATGAAACATTAATGATTTGTCATGAATATATTGATTTTCATTATTATAGAATATTTAATTTGCCCAAAGGTAATTAGCAGTTTTATATTTTTGAATCTTATTGTGGTTAATTGAGGTGTTTGGTTAGATATTGTTAGTATATCCAAAGATAACTAATGCATCTAATTTGAGCATTTAAATTACCAATTATATGAAACTAAATCTAGCATCAATTAAGTGTAAATGTTGTATATTGTTGTACCTTCCAAAGAAGAACTTCAATGTATAAATTAATGGTTATTTAATATTATCTAAACATATGTCAATATCTTTAAGTTTATTTCTCAAAGCAATGATGTATAAGCATATTTATTTTGTAATTGTAGCATCTGCTTCTGTTTCTCTTTATTCGCATGCTACATCTATAATAAAGTTTAATGGGCTCAATTCTCTGATTGGTGCGAACAAATTCGATTGCATCTTGGAGTTTTGGATCTTGATTTAGCACTTTTAAGTGAGAAACCTGCTACAATTACTTCTGCTAGCAGTGATGAGGATAGATCTTTCTATAAAGCTTGGGAAAGATCAAATAGATTGAGCTTAATGTTTATGCGAATGACTGTAGCAAATAATATTAAGTCCACAATTAAGAACACTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCACAGTCGGCTGACAAGTCACTTGCTGGAACACTTATGAGTACTTTAACCAACATCAAGTTTGATGGTTCTCGTATTATCCTTGAAATGACGAACTTGGCAGCAAGGTTAAAGACCATGGGAATGGAAGTTAATGAGAATTTTTTGGTAACGTTTATCCTTAATTCCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACACTCTGAAAGATAAATGGAATGTGCATGAATTACAAAGTATGCTCATTCAAGAGGAAGCGGGGCTTAAGAAACCAATAATTCACTCTGCCAATCTCATGGGTCATAAAGGAGCTGGAAAAAAACCTGGAAAAAAGAATGGCAAGGGCAATCATGGACAATTAAAGGTAAATCAATCATCTGCCCCAATCCACAAAAAGGGACAAATTAAGGATAAGTGTCGTTTTTGTAACAAACCTGGACACTATCAGAAAGATTGTCTAAAACGTAAGGCATGGTTCGAGAATAAAGGTAAGCATAATGCTTCAGTATGTTTCAAATCAAACTTAACTGAAGTTCCTTATAATACATGGTGGATTGATTTTGGTTGTACCATTCATGTTTCCAATACGATGCAGGGATTCCTTACGACCCGAACCACAAACCCAAATGAGAGATTCATTTTTATGGGAAACAGAGTCAAAGTTCCAGTTGAAGCTGTGGGAACCTATCGTTTAACTTTAGATACTGGACATCATTTAGACCTTTTTGATACCTTTTATGTTCCTTCTATTTCTCGTAATTTGATTTCCTTGTCAAAACTTGATACTTCAGGTTATTACTTTAAATTTGGGAATGAGTGTTTTAGTTTATTCAAACAGAACATTTTTATTGGTTCTGGTATTCTTTGTGATGGCTTATATAAATTAAAGCTTGATAATGTTTTTGCTGAGAGTTTGTTAACCTTGCATCATAATGTTGGTACTAAACGTGGTCAAACTAATGAATCGTCAGCTTACTTGTGGCATAAACGTTTAGGTCACATATCCAAAGAAAGAATTAAAAGATTGATAAAGAATGAAATTCTTCCAGATTTGGATTTTACTGACCTTGGAATTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACAGTTAATAAAGAAGCCACAAGAAGCTCACAGCTCCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTTCCATCTTTTGGTGGAGAAAAGTATTTTATCACCTTTATTGATGATTTCTCACGTTATGGTTATATCTATTTATTGCATGAGAAATCTCAAGCAATAGATGCCTTAAAAGTATTTATAAATGAAGTTGAAAGGCAATTAGATAGAAAGGTGAAAATCTTAAGATCTGATAGAGGTGGTAAGTATTATGGAAAATATGACGAGAATGGACAATGCCCGGTCCATTCGCTAAATTCCTAGAAAGCCATGGCATATGTGCTCAATACACAATGCCAGGAACACCACAATAAAATGGTGTTGCAGAAAGGCGAAATCGTATATTAATGAATATGGTTAGAAGCATGTTAATTAATTCATCTTTACATGTGTCCTTGTGGATGTATGCATTAAGAACCGCTCAATATTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAATGGATAAGAAGGAAACCTAGTTTAAGACACCTATATGTTTGGGGTTATCAAGTGGAAGTAAGAATTTATAATCCACATGAAAAGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAACCACAGTATGAGAATAGTTGAAACTTGAAATGTAAGGTTCATTGAGAATGACATAATTAGTGGGAGTTTGGAACCACGAAAAGTGGAAATTCAAGAAGTTAGGGTGGAAATTCCTTCATCTATAACTTCTTCTCAAGTTGTTGTTCCTGTAGTTGTTGACTCTGTTAACAATCCACAAGAACAACAAATTAATGGTCAAACACCACATAATGATATTGTAACAAATGAACCTGTAACTGAGGGACCACAAGAAATAGAATTAAGAAGATCTGTAAGATCAAGAAGATCAGCTATTTCTGATGACTATTTGGTTTATTTGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAGTTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGTTAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAAGTCTGGGATCTTGTAGAATTGCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACCAAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGGCATTGACTACAAAGAGACATTTTCTCCTGTCTCGAAAAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACTGCCTTTCTAAATGGAAATTTAGATGAAGAAGTGTTCATGGATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTACAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCTAATTCAGAATGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGCTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCCAGATGTGTGGATACAAGAAAATCCACTTTTGGCTATTTGTTCTTGTTAGCTGAAGGAGAAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGTGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGCCAAGCCACTGAGAATTTATTGTGATAATTCTGCAACAGTTTTCTTCTCAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAAAATACTTTGTCGTTAAAGAAGAAGTTCAGAAACAGAGGGTGTCAATTGAACACATTAGCACTAAACTTATGATTGCGGATCCACTGACTAAAGGATTGCCACCAAAGACGTTCAATGATCACGTTGAACGTATGGGCATCAGTAGATATCATCATTGA

mRNA sequence

ATGAATAATTTGTTAGTCACCAAAGTGGCCAAATTAGTAAGTTCAATAGATATCAAATTAAGGTTAAACTCAATTACTCCTATTTATAAACCTGCTACAATTACTTCTGCTAGCAGTGATGAGGATAGATCTTTCTATAAAGCTTGGGAAAGATCAAATAGATTGAGCTTAATGTTTATGCGAATGACTGTAGCAAATAATATTAAGTCCACAATTAAGAACACTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCACAGTCGGCTGACAAGTCACTTGCTGGAACACTTATGAGTACTTTAACCAACATCAAGTTTGATGGTTCTCGTATTATCCTTGAAATGACGAACTTGGCAGCAAGGTTAAAGACCATGGGAATGGAAGTTAATGAGAATTTTTTGGTAACGTTTATCCTTAATTCCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACACTCTGAAAGATAAATGGAATGTGCATGAATTACAAAGTATGCTCATTCAAGAGGAAGCGGGGCTTAAGAAACCAATAATTCACTCTGCCAATCTCATGGGTCATAAAGGAGCTGGAAAAAAACCTGGAAAAAAGAATGGCAAGGGCAATCATGGACAATTAAAGGTAAATCAATCATCTGCCCCAATCCACAAAAAGGGACAAATTAAGGATAAGTGTCGTTTTTGTAACAAACCTGGACACTATCAGAAAGATTGTCTAAAACGTAAGGCATGGTTCGAGAATAAAGGTAAGCATAATGCTTCAGTATGTTTCAAATCAAACTTAACTGAAGTTCCTTATAATACATGGTGGATTGATTTTGGTTGTACCATTCATGTTTCCAATACGATGCAGGGATTCCTTACGACCCGAACCACAAACCCAAATGAGAGATTCATTTTTATGGGAAACAGAGTCAAAGTTCCAGTTGAAGCTGTGGGAACCTATCGTTTAACTTTAGATACTGGACATCATTTAGACCTTTTTGATACCTTTTATGTTCCTTCTATTTCTCGTAATTTGATTTCCTTGTCAAAACTTGATACTTCAGGTTATTACTTTAAATTTGGGAATGAGTGTTTTAGTTTATTCAAACAGAACATTTTTATTGGTTCTGGTATTCTTTGTGATGGCTTATATAAATTAAAGCTTGATAATGTTTTTGCTGAGAGTTTGTTAACCTTGCATCATAATGTTGGTACTAAACGTGGTCAAACTAATGAATCGTCAGCTTACTTGTGGCATAAACGTTTAGGTCACATATCCAAAGAAAGAATTAAAAGATTGATAAAGAATGAAATTCTTCCAGATTTGGATTTTACTGACCTTGGAATTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACAGTTAATAAAGAAGCCACAAGAAGCTCACAGCTCCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTTCCATCTTTTGGTGGAGAAAAGTATTTTATCACCTTTATTGATGATTTCTCACGTTATGGTTATATCTATTTATTGCATGAGAAATCTCAAGCAATAGATGCCTTAAAAGTATTTATAAATGAAGTTGAAAGGCAATTAGATAGAAAGGTGAAAATCTTAAGATCTGATAGAGAAAGGCGAAATCGTATATTAATGAATATGGTTAGAAGCATGTTAATTAATTCATCTTTACATGTGTCCTTGTGGATGTATGCATTAAGAACCGCTCAATATTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAATGGATAAGAAGGAAACCTAGTTTAAGACACCTATATGTTTGGGGTTATCAAGTGGAAGTAAGAATTTATAATCCACATGAAAAGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAACCACAGTATGAGAATAAATGACATAATTAGTGGGAGTTTGGAACCACGAAAAGTGGAAATTCAAGAAGTTAGGGTGGAAATTCCTTCATCTATAACTTCTTCTCAAGTTGTTGTTCCTGTAGTTGTTGACTCTGTTAACAATCCACAAGAACAACAAATTAATGGTCAAACACCACATAATGATATTGTAACAAATGAACCTGTAACTGAGGGACCACAAGAAATAGAATTAAGAAGATCTGTAAGATCAAGAAGATCAGCTATTTCTGATGACTATTTGGTTTATTTGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAGTTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGTTAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAAGTCTGGGATCTTGTAGAATTGCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACCAAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGGCATTGACTACAAAGAGACATTTTCTCCTGTCTCGAAAAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACTGCCTTTCTAAATGGAAATTTAGATGAAGAAGTGTTCATGGATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTACAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCTAATTCAGAATGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGCTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCCAGATGTGTGGATACAAGAAAATCCACTTTTGGCTATTTGTTCTTGTTAGCTGAAGGAGAAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGTGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGCCAAGCCACTGAGAATTTATTGTGATAATTCTGCAACAGTTTTCTTCTCAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAAAATACTTTGTCGTTAAAGAAGAAGTTCAGAAACAGAGGGTGTCAATTGAACACATTAGCACTAAACTTATGATTGCGGATCCACTGACTAAAGGATTGCCACCAAAGACGTTCAATGATCACGTTGAACGTATGGGCATCAGTAGATATCATCATTGA

Coding sequence (CDS)

ATGAATAATTTGTTAGTCACCAAAGTGGCCAAATTAGTAAGTTCAATAGATATCAAATTAAGGTTAAACTCAATTACTCCTATTTATAAACCTGCTACAATTACTTCTGCTAGCAGTGATGAGGATAGATCTTTCTATAAAGCTTGGGAAAGATCAAATAGATTGAGCTTAATGTTTATGCGAATGACTGTAGCAAATAATATTAAGTCCACAATTAAGAACACTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTCAGTCACAGTCGGCTGACAAGTCACTTGCTGGAACACTTATGAGTACTTTAACCAACATCAAGTTTGATGGTTCTCGTATTATCCTTGAAATGACGAACTTGGCAGCAAGGTTAAAGACCATGGGAATGGAAGTTAATGAGAATTTTTTGGTAACGTTTATCCTTAATTCCTTACCTTCAGAGTATGGTCCATTTCACATGAACTATAACACTCTGAAAGATAAATGGAATGTGCATGAATTACAAAGTATGCTCATTCAAGAGGAAGCGGGGCTTAAGAAACCAATAATTCACTCTGCCAATCTCATGGGTCATAAAGGAGCTGGAAAAAAACCTGGAAAAAAGAATGGCAAGGGCAATCATGGACAATTAAAGGTAAATCAATCATCTGCCCCAATCCACAAAAAGGGACAAATTAAGGATAAGTGTCGTTTTTGTAACAAACCTGGACACTATCAGAAAGATTGTCTAAAACGTAAGGCATGGTTCGAGAATAAAGGTAAGCATAATGCTTCAGTATGTTTCAAATCAAACTTAACTGAAGTTCCTTATAATACATGGTGGATTGATTTTGGTTGTACCATTCATGTTTCCAATACGATGCAGGGATTCCTTACGACCCGAACCACAAACCCAAATGAGAGATTCATTTTTATGGGAAACAGAGTCAAAGTTCCAGTTGAAGCTGTGGGAACCTATCGTTTAACTTTAGATACTGGACATCATTTAGACCTTTTTGATACCTTTTATGTTCCTTCTATTTCTCGTAATTTGATTTCCTTGTCAAAACTTGATACTTCAGGTTATTACTTTAAATTTGGGAATGAGTGTTTTAGTTTATTCAAACAGAACATTTTTATTGGTTCTGGTATTCTTTGTGATGGCTTATATAAATTAAAGCTTGATAATGTTTTTGCTGAGAGTTTGTTAACCTTGCATCATAATGTTGGTACTAAACGTGGTCAAACTAATGAATCGTCAGCTTACTTGTGGCATAAACGTTTAGGTCACATATCCAAAGAAAGAATTAAAAGATTGATAAAGAATGAAATTCTTCCAGATTTGGATTTTACTGACCTTGGAATTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACAGTTAATAAAGAAGCCACAAGAAGCTCACAGCTCCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTTCCATCTTTTGGTGGAGAAAAGTATTTTATCACCTTTATTGATGATTTCTCACGTTATGGTTATATCTATTTATTGCATGAGAAATCTCAAGCAATAGATGCCTTAAAAGTATTTATAAATGAAGTTGAAAGGCAATTAGATAGAAAGGTGAAAATCTTAAGATCTGATAGAGAAAGGCGAAATCGTATATTAATGAATATGGTTAGAAGCATGTTAATTAATTCATCTTTACATGTGTCCTTGTGGATGTATGCATTAAGAACCGCTCAATATTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAATGGATAAGAAGGAAACCTAGTTTAAGACACCTATATGTTTGGGGTTATCAAGTGGAAGTAAGAATTTATAATCCACATGAAAAGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAACCACAGTATGAGAATAAATGACATAATTAGTGGGAGTTTGGAACCACGAAAAGTGGAAATTCAAGAAGTTAGGGTGGAAATTCCTTCATCTATAACTTCTTCTCAAGTTGTTGTTCCTGTAGTTGTTGACTCTGTTAACAATCCACAAGAACAACAAATTAATGGTCAAACACCACATAATGATATTGTAACAAATGAACCTGTAACTGAGGGACCACAAGAAATAGAATTAAGAAGATCTGTAAGATCAAGAAGATCAGCTATTTCTGATGACTATTTGGTTTATTTGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAGTTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGTTAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAAGTCTGGGATCTTGTAGAATTGCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACCAAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGGCATTGACTACAAAGAGACATTTTCTCCTGTCTCGAAAAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACTGCCTTTCTAAATGGAAATTTAGATGAAGAAGTGTTCATGGATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTACAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCTAATTCAGAATGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGCTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAGGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCCAGATGTGTGGATACAAGAAAATCCACTTTTGGCTATTTGTTCTTGTTAGCTGAAGGAGAAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGTGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGCCAAGCCACTGAGAATTTATTGTGATAATTCTGCAACAGTTTTCTTCTCAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAAAATACTTTGTCGTTAAAGAAGAAGTTCAGAAACAGAGGGTGTCAATTGAACACATTAGCACTAAACTTATGATTGCGGATCCACTGACTAAAGGATTGCCACCAAAGACGTTCAATGATCACGTTGAACGTATGGGCATCAGTAGATATCATCATTGA

Protein sequence

MNNLLVTKVAKLVSSIDIKLRLNSITPIYKPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSQSADKSLAGTLMSTLTNIKFDGSRIILEMTNLAARLKTMGMEVNENFLVTFILNSLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGKKNGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCFKSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDGLYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDRERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYLLNRVPSKSVPKTPFEWIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGYRFYCPNHSMRINDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAKHMELKYFVVKEEVQKQRVSIEHISTKLMIADPLTKGLPPKTFNDHVERMGISRYHH

Homology

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BLAST of Pay0013441 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.0e-187
Identity = 442/1316 (33.59%), Postives = 666/1316 (50.61%), Query Frame = 0


Query: 49   WERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSQS------ADKSLAGTL 108
            W   +  +   +R+ +++++ + I + + A+     +E    S++        K L    
Sbjct: 52   WADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALH 111

Query: 109  MSTLTNIKFDGSRIILEMTNLAARLKTMGMEVNENFLVTFILNSLPSEYGPFHMNYNTLK 168
            MS  TN        +     L  +L  +G+++ E      +LNSLPS Y          K
Sbjct: 112  MSEGTNFLSH----LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK 171

Query: 169  DKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGKKNGKGNHGQLKVNQSSAPI 228
                + ++ S L+  E   KKP      L+     G+    +    N+G+      S   
Sbjct: 172  TTIELKDVTSALLLNEKMRKKPENQGQALITE---GRGRSYQRSSNNYGRSGARGKSKN- 231

Query: 229  HKKGQIKDKCRFCNKPGHYQKDCLK-RKAWFENKGKHN-----ASVCFKSNLT------- 288
              K ++++ C  CN+PGH+++DC   RK   E  G+ N     A V    N+        
Sbjct: 232  RSKSRVRN-CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEE 291

Query: 289  -----EVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 348
                   P + W +D   + H +      L  R    +   + MGN     +  +G   +
Sbjct: 292  ECMHLSGPESEWVVDTAASHHATPVRD--LFCRYVAGDFGTVKMGNTSYSKIAGIGDICI 351

Query: 349  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 408
              + G  L L D  +VP +  NLIS   LD  GY   F N+ + L K ++ I  G+    
Sbjct: 352  KTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGT 411

Query: 409  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 468
            LY+   +              G      +E S  LWHKR+GH+S++ ++ L K  ++   
Sbjct: 412  LYRTNAEIC-----------QGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYA 471

Query: 469  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 528
              T +  C  C+ GKQ + +    + R   +L+++++D+CGP ++ S GG KYF+TFIDD
Sbjct: 472  KGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDD 531

Query: 529  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------ 588
             SR  ++Y+L  K Q     + F   VER+  RK+K LRSD                   
Sbjct: 532  ASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGI 591

Query: 589  ----------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYLLNRVPSKSV 648
                            ER NR ++  VRSML  + L  S W  A++TA YL+NR P  SV
Sbjct: 592  RHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSP--SV 651

Query: 649  PKTPFE-----WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGY 708
            P   FE     W  ++ S  HL V+G +    +      KLD ++    FIGY ++  GY
Sbjct: 652  P-LAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGY 711

Query: 709  RFYCP--NHSMRINDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNP---- 768
            R + P     +R  D++    E R     ++  ++ + I  + V +P    + NNP    
Sbjct: 712  RLWDPVKKKVIRSRDVVFRESEVRTA--ADMSEKVKNGIIPNFVTIP---STSNNPTSAE 771

Query: 769  ---QEQQINGQTPHNDIVTNEPVTEGPQEIE-----------LRRSVRSR---RSAISDD 828
                E    G+ P   I   E + EG +E+E           LRRS R R   R   S +
Sbjct: 772  STTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTE 831

Query: 829  YLVYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESK 888
            Y++        +S D +P S  + +      + + AM+EE++S+  N  + LVELPK  +
Sbjct: 832  YVL--------ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKR 891

Query: 889  RVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAH 948
             + CKWVFK K+D +  + RYKARLV KG+ QK GID+ E FSPV K  S+R I++L A 
Sbjct: 892  PLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAAS 951

Query: 949  YDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLK 1008
             DLE+ Q+DVKTAFL+G+L+EE++M+QPEGF V GK+HMVCKL +S+YGLKQA RQWY+K
Sbjct: 952  LDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMK 1011

Query: 1009 FNDTITSFGFKENIVDRCIYLK-ISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNF 1068
            F+  + S  + +   D C+Y K  S + FIIL+LYVDD+L+   D GL+ + K  LSK+F
Sbjct: 1012 FDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSF 1071

Query: 1069 EMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSL 1128
            +MKD+G A  ++G++I R+RT   L LSQ+ YI +VLE+F M         +    K S 
Sbjct: 1072 DMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSK 1131

Query: 1129 MQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKK 1188
              CP    E+  M  +PY+S VGSL+YA  CTRPDI+ AVG++ R+  NPG +HW+A K 
Sbjct: 1132 KMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKW 1191

Query: 1189 VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQ 1248
            +LRYL+GT    L +  SD + + GY+D+D A  +D RKS+ GYLF  + G ISW+S  Q
Sbjct: 1192 ILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQ 1251

Query: 1249 SIIAASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKY 1278
              +A ST EAE++A  E     +WL  F+  LG+     K   +YCD+ + +  SKN  Y
Sbjct: 1252 KCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ---KEYVVYCDSQSAIDLSKNSMY 1311

[Close]

BLAST of Pay0013441 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 478.4 bits (1230), Expect = 2.5e-133
Identity = 387/1395 (27.74%), Postives = 628/1395 (45.02%), Query Frame = 0


Query: 48   AWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQSQSADKSLAGTLMSTLT 107
            +W+++ R +   +   ++++  +   +   A++ +++++   + +S    LA  L   L 
Sbjct: 47   SWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLA--LRKRLL 106

Query: 108  NIKFDGSRIILE----MTNLAARLKTMGMEVNENFLVTFILNSLPSEYGPFHMNYNTL-K 167
            ++K      +L        L + L   G ++ E   ++ +L +LPS Y        TL +
Sbjct: 107  SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE 166

Query: 168  DKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGKKNGKGNHGQLKVNQSSAPI 227
            +   +  +++ L+ +E  +K    H+        A         K N  + +V +     
Sbjct: 167  ENLTLAFVKNRLLDQEIKIKND--HNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIF 226

Query: 228  HKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHN------------ASVCFKSNLTE 287
                + K KC  C + GH +KDC   K    NK K N            A +  + N T 
Sbjct: 227  KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTS 286

Query: 288  VPYNTWWI-DFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTG 347
            V  N  ++ D G + H+ N    +  +    P  +         +     G  RL  D  
Sbjct: 287  VMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRND-- 346

Query: 348  HHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFI--GSGILCDGLYK 407
            H + L D  +    + NL+S+ +L  +G   +F     ++ K  + +   SG+    L  
Sbjct: 347  HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGM----LNN 406

Query: 408  LKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPD---L 467
            + + N  A S+   H N           +  LWH+R GHIS  ++  + +  +  D   L
Sbjct: 407  VPVINFQAYSINAKHKN-----------NFRLWHERFGHISDGKLLEIKRKNMFSDQSLL 466

Query: 468  DFTDLG--ICVDCIKGKQTKHTVN--KEATRSSQLLEIIHTDICGPFDVPSFGGEKYFIT 527
            +  +L   IC  C+ GKQ +      K+ T   + L ++H+D+CGP    +   + YF+ 
Sbjct: 467  NNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVI 526

Query: 528  FIDDFSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR-------------- 587
            F+D F+ Y   YL+  KS      + F+ + E   + KV  L  D               
Sbjct: 527  FVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCV 586

Query: 588  --------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYLLNRVP 647
                                ER  R +    R+M+  + L  S W  A+ TA YL+NR+P
Sbjct: 587  KKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIP 646

Query: 648  SKSV---PKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPE-- 707
            S+++    KTP+E W  +KP L+HL V+G  V V I N  + K D ++    F+GY    
Sbjct: 647  SRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVGYEPNG 706

Query: 708  -------------------------KSKGYRFYC-------------------------- 767
                                      S+  +F                            
Sbjct: 707  FKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 766

Query: 768  PNHSMRINDI--ISGSLEPRKVEIQE-----VRVEIPSSITSSQVVVPVVVDS------- 827
            PN S   ++I  +  S E             ++ E P+        +  + DS       
Sbjct: 767  PNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECD-NIQFLKDSKESNKYF 826

Query: 828  ------------------VNNPQEQQINGQTPH-NDIVTNEPVTEGPQEIELRRSVRSRR 887
                                NP E + +    H  +I  + P      EI  RRS R + 
Sbjct: 827  LNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKT 886

Query: 888  SAISDDYLVYLHESEFDL--------SIDND-PVSFSQAIKGDNSTKWLDAMKEELKSMN 947
                    +  +E +  L        +I ND P SF +    D+ + W +A+  EL +  
Sbjct: 887  KP-----QISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHK 946

Query: 948  DNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPV 1007
             N  W + + P+    V  +WVF  K +  GN  RYKARLVA+G+TQK  IDY+ETF+PV
Sbjct: 947  INNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPV 1006

Query: 1008 SKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKR 1067
            ++  S R I++LV  Y+L++HQMDVKTAFLNG L EE++M  P+G  +      VCKL +
Sbjct: 1007 ARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNK 1066

Query: 1068 SIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILVLYVDDILLATN 1127
            +IYGLKQA+R W+  F   +    F  + VDRCIY+   G  ++ I ++LYVDD+++AT 
Sbjct: 1067 AIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATG 1126

Query: 1128 DFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDK 1187
            D   +   K +L + F M D+ E  + IGI I  +     + LSQ AY+ K+L KF M+ 
Sbjct: 1127 DMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMEN 1186

Query: 1188 CSSSVVLIQNGDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLG 1247
            C++    + +   + L       L  ++    P  S++G L+Y   CTRPD++ AV +L 
Sbjct: 1187 CNAVSTPLPSKINYEL-------LNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1246

Query: 1248 RYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLE--VIGYSDSDFARCVDTRKSTF 1278
            RY S    + W+  K+VLRYL+GT D  L +K++   E  +IGY DSD+A     RKST 
Sbjct: 1247 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1306

[Close]

BLAST of Pay0013441 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 5.7e-117
Identity = 380/1440 (26.39%), Postives = 614/1440 (42.64%), Query Frame = 0


Query: 22   LNSITPIYKPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEF 81
            L+  TP+  PATI + +       Y  W R ++L    +   ++ +++  +     A + 
Sbjct: 51   LDGSTPM-PPATIGTDAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQI 110

Query: 82   MKSVEKCSQSQSADKSLAGTLMSTLTNIKFDGSRIILEMTNLAARLKTMGMEVNENFLVT 141
             +++ K   + S            +T ++F     I     LA     +G  ++ +  V 
Sbjct: 111  WETLRKIYANPS---------YGHVTQLRF-----ITRFDQLA----LLGKPMDHDEQVE 170

Query: 142  FILNSLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGL-----KKPIIHSANLMGH-- 201
             +L +LP +Y P            ++ E+   LI  E+ L      + +  +AN++ H  
Sbjct: 171  RVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRN 230

Query: 202  ---------KGAGKKPGKKNGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDC 261
                     +G  +     N + N  Q   + S +   +      +C+ C+  GH  K C
Sbjct: 231  TNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRC 290

Query: 262  LKRKAWFENKGKHNASVCF-----KSNL-TEVPY--NTWWIDFGCTIHVSNTMQGFLTTR 321
             +   +     +  ++  F     ++NL    PY  N W +D G T H+++     L+  
Sbjct: 291  PQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNN-LSFH 350

Query: 322  TTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLDLFDTFYVPSISRNLISLSKL-DTS 381
                    + + +   +P+   G+  L   +   LDL    YVP+I +NLIS+ +L +T+
Sbjct: 351  QPYTGGDDVMIADGSTIPITHTGSASLP-TSSRSLDLNKVLYVPNIHKNLISVYRLCNTN 410

Query: 382  GYYFKFGNECFSLFKQN--IFIGSGILCDGLYKLKLDNVFAESLLTLHHNVGTKRGQTNE 441
                +F    F +   N  + +  G   D LY+  + +  A S+              ++
Sbjct: 411  RVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFA---------SPCSK 470

Query: 442  SSAYLWHKRLGHISKERIKRLIKNEILPDLDFT-DLGICVDCIKGKQTKHTVNKEATRSS 501
            ++   WH RLGH S   +  +I N  LP L+ +  L  C DC   K  K   +     SS
Sbjct: 471  ATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSS 530

Query: 502  QLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKVFINEVER 561
            + LE I++D+     + S    +Y++ F+D F+RY ++Y L +KSQ  D   +F + VE 
Sbjct: 531  KPLEYIYSDVWSS-PILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVEN 590

Query: 562  QLDRKVKILRSDR--------------------------------ERRNRILMNMVRSML 621
            +   ++  L SD                                 ER++R ++ M  ++L
Sbjct: 591  RFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLL 650

Query: 622  INSSLHVSLWMYALRTAQYLLNRVPSKSVP-KTPFEWI-RRKPSLRHLYVWGYQVE--VR 681
             ++S+  + W YA   A YL+NR+P+  +  ++PF+ +  + P+   L V+G      +R
Sbjct: 651  SHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLR 710

Query: 682  IYNPHEKKLDSRTTSGFFIGYPEKSKGY--------RFYCPNHSM---------RINDII 741
             YN H  KL+ ++    F+GY      Y        R Y   H             N  +
Sbjct: 711  PYNRH--KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGV 770

Query: 742  SGSLEPRK------------------------------------------VEIQEVRVEI 801
            S S E R                                              Q     +
Sbjct: 771  STSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNL 830

Query: 802  PSSITSSQVVVPVVVDSVNNPQEQQINGQTPH---NDIVTNEPVTEGPQEIELRRSVRSR 861
            PSS  SS         S N PQ      QT +   N  + N P    P      ++    
Sbjct: 831  PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLP 890

Query: 862  RSAISDDYL----------------------------------------VYLHES----- 921
            +S IS  ++                                        V  H       
Sbjct: 891  QSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAK 950

Query: 922  ------------EFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELP 981
                           L+ +++P +  QA+K D   +W  AM  E+ +   N  WDLV  P
Sbjct: 951  DGIRKPNQKYSYATSLAANSEPRTAIQAMKDD---RWRQAMGSEINAQIGNHTWDLVPPP 1010

Query: 982  KESKR-VGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIM 1041
              S   VGC+W+F  K +S+G++ RYKARLVAKGY Q+ G+DY ETFSPV K  S+RI++
Sbjct: 1011 PPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1070

Query: 1042 ALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASR 1101
             +       + Q+DV  AFL G L +EV+M QP GF+ + +   VC+L+++IYGLKQA R
Sbjct: 1071 GVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1130

Query: 1102 QWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFL 1161
             WY++    + + GF  +I D  +++   G   I +++YVDDIL+  ND  LL  T + L
Sbjct: 1131 AWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDAL 1190

Query: 1162 SKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGD 1221
            S+ F +K+  +  Y +GIE    R    L LSQ+ Y   +L +  M         +    
Sbjct: 1191 SQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSP 1250

Query: 1222 KFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWK 1278
            K +L    K        +   Y  IVGSL Y    TRPD+S+AV  L +Y   P  DHW 
Sbjct: 1251 KLTLHSGTK------LPDPTEYRGIVGSLQYL-AFTRPDLSYAVNRLSQYMHMPTDDHWN 1310

[Close]

BLAST of Pay0013441 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.8e-115
Identity = 377/1442 (26.14%), Postives = 625/1442 (43.34%), Query Frame = 0


Query: 31   PATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCSQ 90
            PATI + ++      Y  W+R ++L    +   ++ +++  +     A +  +++ K   
Sbjct: 59   PATIGTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYA 118

Query: 91   SQSADKSLAGTLMSTLTNIK--FDGSRIILE-MTNLAAR---LKTMGMEVNENFLVTFIL 150
            + S      G +    T +K    G++ I + M  L  R   L  +G  ++ +  V  +L
Sbjct: 119  NPS-----YGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVL 178

Query: 151  NSLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGL-----KKPIIHSANLMGHKGAGK 210
             +LP EY P             + E+   L+  E+ +        I  +AN + H+    
Sbjct: 179  ENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTT 238

Query: 211  KPGKKNG---------KGNHGQLKVNQSSAPIH-KKGQIK---DKCRFCNKPGHYQKDCL 270
                 NG           N+      QSS   H    Q K    KC+ C   GH  K C 
Sbjct: 239  TNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCS 298

Query: 271  KRKAWFENKGKHNASVCF-----KSNLT-EVPY--NTWWIDFGCTIHVSNTMQGFLTTRT 330
            + + +  +         F     ++NL    PY  N W +D G T H+++     L+   
Sbjct: 299  QLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNN-LSLHQ 358

Query: 331  TNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLDLFDTFYVPSISRNLISLSKL-DTSG 390
                   + + +   +P+   G+  L+  +   L+L +  YVP+I +NLIS+ +L + +G
Sbjct: 359  PYTGGDDVMVADGSTIPISHTGSTSLSTKS-RPLNLHNILYVPNIHKNLISVYRLCNANG 418

Query: 391  YYFKFGNECFSLFKQN--IFIGSGILCDGLYKLKLDNVFAESLLTLHHNVGTKRGQTNES 450
               +F    F +   N  + +  G   D LY+  + +    SL             ++++
Sbjct: 419  VSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFA---------SPSSKA 478

Query: 451  SAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGI-CVDCIKGKQTKHTVNKEATRSSQ 510
            +   WH RLGH +   +  +I N  L  L+ +   + C DC+  K  K   ++    S++
Sbjct: 479  THSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTR 538

Query: 511  LLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKVFINEVERQ 570
             LE I++D+     + S    +Y++ F+D F+RY ++Y L +KSQ  +    F N +E +
Sbjct: 539  PLEYIYSDVWSS-PILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENR 598

Query: 571  LDRKVKILRSDR--------------------------------ERRNRILMNMVRSMLI 630
               ++    SD                                 ER++R ++    ++L 
Sbjct: 599  FQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLS 658

Query: 631  NSSLHVSLWMYALRTAQYLLNRVPSKSVP-KTPFEWI-RRKPSLRHLYVWGYQVE--VRI 690
            ++S+  + W YA   A YL+NR+P+  +  ++PF+ +    P+   L V+G      +R 
Sbjct: 659  HASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRP 718

Query: 691  YNPHEKKLDSRTTSGFFIGYPEKSKGY--------RFYCPNHSMRIND------IISGSL 750
            YN H  KLD ++    F+GY      Y        R Y   H +R ++          +L
Sbjct: 719  YNQH--KLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRH-VRFDENCFPFSNYLATL 778

Query: 751  EPRKVEIQEVRVE---IPSSITSSQVVVPVV--------------------------VDS 810
             P    +QE R E   + S  T+     PV+                          V S
Sbjct: 779  SP----VQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSS 838

Query: 811  VN-------------NPQEQQINGQTP-----------HNDIVT--NEPVTEGPQEIELR 870
             N              P   + NG  P           H+   T  N P  E P ++   
Sbjct: 839  SNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQS 898

Query: 871  RSVRSRRSAISDDYLVYLHESE-------------------------------------- 930
             S  ++ S+ S         S                                       
Sbjct: 899  LSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAK 958

Query: 931  -------------FDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELP 990
                           L+ +++P +  QA+K +   +W +AM  E+ +   N  WDLV  P
Sbjct: 959  AGIIKPNPKYSLAVSLAAESEPRTAIQALKDE---RWRNAMGSEINAQIGNHTWDLVPPP 1018

Query: 991  KESKR-VGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIM 1050
                  VGC+W+F  K +S+G++ RYKARLVAKGY Q+ G+DY ETFSPV K  S+RI++
Sbjct: 1019 PSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1078

Query: 1051 ALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASR 1110
             +       + Q+DV  AFL G L ++V+M QP GF+ + + + VCKL++++YGLKQA R
Sbjct: 1079 GVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1138

Query: 1111 QWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFL 1170
             WY++  + + + GF  ++ D  +++   G   + +++YVDDIL+  ND  LL  T + L
Sbjct: 1139 AWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNL 1198

Query: 1171 SKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGD 1230
            S+ F +KD  E  Y +GIE  R  T   L LSQ+ YI  +L +  M         +    
Sbjct: 1199 SQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRRYILDLLARTNMITAKPVTTPMAPSP 1258

Query: 1231 KFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWK 1280
            K SL    K        +   Y  IVGSL Y    TRPDIS+AV  L ++   P  +H +
Sbjct: 1259 KLSLYSGTK------LTDPTEYRGIVGSLQYL-AFTRPDISYAVNRLSQFMHMPTEEHLQ 1318

[Close]

BLAST of Pay0013441 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 6.2e-39
Identity = 99/313 (31.63%), Postives = 160/313 (51.12%), Query Frame = 0


Query: 870  MDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITS 929
            MDV TAFLN  +DE +++ QP GF+ E     V +L   +YGLKQA   W    N+T+  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 930  FGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEA 989
             GF  +  +  +Y + +    I + +YVDD+L+A     +  + K+ L+K + MKD+G+ 
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 990  SYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNEL 1049
               +G+ I +  ++G + LS + YI K   + +++    +   + N         P    
Sbjct: 121  DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 1050 ERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGT 1109
              +  +  PY SIVG LL+     RPDIS+ V +L R+   P   H ++A++VLRYL  T
Sbjct: 181  --HLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 1110 KDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAK-QSIIAAST 1169
            +   L Y+    L +  Y D+      D   ST GY+ LLA   ++W S K + +I   +
Sbjct: 241  RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 1170 MEAEFVACFEATV 1182
             EAE++   E  +
Sbjct: 301  TEAEYITASETVM 306

[Close]

BLAST of Pay0013441 vs. ExPASy TrEMBL
Match: A0A445LQ30 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Glycine soja OX=3848 GN=D0Y65_004205 PE=4 SV=1)

HSP 1 Score: 1883.6 bits (4878), Expect = 0.0e+00
Identity = 953/1309 (72.80%), Postives = 1082/1309 (82.66%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KPATIT ASS+E ++ YKAWERSNRLSLMFMRMTVA++IK+ +  T+ AKEFM  V +  
Sbjct: 110  KPATITDASSNEQKAHYKAWERSNRLSLMFMRMTVADSIKTALPKTDSAKEFMGLVGE-- 169

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSRI----ILEMTNLAARLKTMGMEVNENFLVTFILN 149
            +SQ+ADKSLAGTLMSTLT +KFDGSR     ++EMTN+AARLKT+GM VNENFLV FILN
Sbjct: 170  RSQTADKSLAGTLMSTLTTMKFDGSRTMHEHVIEMTNIAARLKTLGMAVNENFLVQFILN 229

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHK---GAGKKPG 209
            SLPSEYGPF M+YNT+KDKWNVHEL SML+QEE  LK    HS + + H+   GAGKK  
Sbjct: 230  SLPSEYGPFQMSYNTMKDKWNVHELHSMLVQEETRLKNQGSHSIHYVSHRGNQGAGKKFV 289

Query: 210  KKNGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASV 269
            KK+ KG  G LK+      I KK    + C FC K GH+QKDC KRK+WFE KG+ NA V
Sbjct: 290  KKHDKGK-GPLKIKDGPVQIQKKASKNNNCHFCGKSGHFQKDCPKRKSWFEKKGELNALV 349

Query: 270  CFKSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTY 329
            CF+SNLTEVP+NTWWID GCT HVSNTMQGFLT +T +PNE+F+FMGNRVK PVEAVGTY
Sbjct: 350  CFESNLTEVPHNTWWIDSGCTTHVSNTMQGFLTIQTISPNEKFVFMGNRVKAPVEAVGTY 409

Query: 330  RLTLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILC 389
            RL LDTGHHLDL +T YVPS+SRNL+SLSKLD +GY F FGN CFSLFK N  IG+G+LC
Sbjct: 410  RLKLDTGHHLDLLETLYVPSLSRNLVSLSKLDITGYSFNFGNGCFSLFKYNHLIGTGVLC 469

Query: 390  DGLYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILP 449
            DGLYKLKLD ++ E++LTLHHNVGTKR   NE SA+LWHKRLGHIS ERI+RLIKNEILP
Sbjct: 470  DGLYKLKLDGLYVETVLTLHHNVGTKRSLVNERSAFLWHKRLGHISGERIERLIKNEILP 529

Query: 450  DLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFI 509
            DLDFTDL ICVDCIKGKQTKHT  K ATRS+QLLEI+HTDICGPFDV SFG E+YFITFI
Sbjct: 530  DLDFTDLNICVDCIKGKQTKHT-KKGATRSTQLLEIVHTDICGPFDVSSFGRERYFITFI 589

Query: 510  DDFSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR---------------- 569
            DD+SRYGY+YLLHEKSQA++AL++++NEVERQLDRKVKI+RSDR                
Sbjct: 590  DDYSRYGYVYLLHEKSQAVNALEIYLNEVERQLDRKVKIIRSDRGGEYYRRYDETGQHPS 649

Query: 570  ---------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQ 629
                                       ERRN+ LM+MVRSMLINS+L VSLWMYAL+TA 
Sbjct: 650  PFAKLLQKRGICAQYTMPGTPQQNGVSERRNKTLMDMVRSMLINSTLPVSLWMYALKTAM 709

Query: 630  YLLNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGY 689
            YLLNRVPSK+VPKTPFE W  R PS+RHL+VWG Q E+RIYNP E+KLD+RT SG+FIGY
Sbjct: 710  YLLNRVPSKAVPKTPFELWTNRTPSMRHLHVWGCQAEIRIYNPQERKLDARTISGYFIGY 769

Query: 690  PEKSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVV 749
            PEKSKGY FYCPNHS RI          N  ISGS  PR+VEI+EVRV++P +  SS  V
Sbjct: 770  PEKSKGYMFYCPNHSTRIVETGNARFIENGEISGSTVPREVEIKEVRVQVPLAFASSSKV 829

Query: 750  VPVVVDSVNNPQEQQINGQTPHND--IVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVY 809
            +   V + N+ +E Q      HND  ++ NEP+ E PQE+ LR+S R RR AIS+DY+VY
Sbjct: 830  ITTSVTATNSNEEVQ------HNDEPMIHNEPIMEEPQEVALRKSQRERRPAISNDYVVY 889

Query: 810  LHESEFDLSI-DNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVG 869
            LHE+E +LSI DNDPVSFSQAI  DNS KWL+AMKEE+ SM  N+VWDLVELPK  KRVG
Sbjct: 890  LHETETNLSINDNDPVSFSQAISCDNSEKWLNAMKEEIDSMEHNDVWDLVELPKGCKRVG 949

Query: 870  CKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDL 929
             KWVFKTKRDS+GN+ERYKARLVAKG+TQKDGIDYKETFSPVS+KDS RIIMALVAHYDL
Sbjct: 950  YKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKETFSPVSRKDSFRIIMALVAHYDL 1009

Query: 930  ELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFND 989
            ELHQMDVKTAFLNG+L+E+V+MDQP GF VEGKEHMVCKLK+SIYGLKQASRQWYLKFND
Sbjct: 1010 ELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQASRQWYLKFND 1069

Query: 990  TITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKD 1049
            TI SFGFKEN VDRC+YLK+SGSK + LVLYVDDILLATND GL  +TK+FLS NFEMKD
Sbjct: 1070 TIVSFGFKENTVDRCVYLKVSGSKVMFLVLYVDDILLATNDLGLFHETKKFLSSNFEMKD 1129

Query: 1050 MGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCP 1109
            MGEASYVIGIEIFR+R+ GLLGLSQKAYINKVLE+F+M+KCS+S V IQ GDKFSL QCP
Sbjct: 1130 MGEASYVIGIEIFRNRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKGDKFSLAQCP 1189

Query: 1110 KNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRY 1169
            KN+LER QME IPYAS+VGS++YAQTCTRPDISFA GMLGRYQSNPGM+HWKAAKKVLRY
Sbjct: 1190 KNDLERKQMEAIPYASVVGSIMYAQTCTRPDISFATGMLGRYQSNPGMEHWKAAKKVLRY 1249

Query: 1170 LQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIA 1229
            LQGTKD++LTYKRSDHLEVIGYSDSDFA CVDTRKST G++FLLA G ISWKSAKQS++A
Sbjct: 1250 LQGTKDHILTYKRSDHLEVIGYSDSDFAGCVDTRKSTLGFVFLLAGGAISWKSAKQSVVA 1309

Query: 1230 ASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGA 1275
            ASTMEA FVACFEAT+   WL NFISGLGIVDSIA+PL++YCDNSA VFFSKNDKYS GA
Sbjct: 1310 ASTMEAAFVACFEATIQANWLRNFISGLGIVDSIARPLKMYCDNSAAVFFSKNDKYSTGA 1369

[Close]

BLAST of Pay0013441 vs. ExPASy TrEMBL
Match: A0A438F5W4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3508 PE=4 SV=1)

HSP 1 Score: 1654.8 bits (4284), Expect = 0.0e+00
Identity = 838/1307 (64.12%), Postives = 1009/1307 (77.20%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KP   T  S+ E     KAW +SNRLSLMFMRMT+ANNIK+++  TE A EF+KSVE+  
Sbjct: 33   KPPEATDDSTPEQVEQSKAWSKSNRLSLMFMRMTIANNIKTSLPQTEFASEFLKSVEE-- 92

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSR----IILEMTNLAARLKTMGMEVNENFLVTFILN 149
            + + ADKSLAGTLM+ LT +K+DG +     IL MT  AA+LK +GM ++E+FLV F+LN
Sbjct: 93   RFKRADKSLAGTLMAELTTMKYDGQKGIQQHILNMTEKAAKLKALGMGMDESFLVQFVLN 152

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGK-K 209
            SLPS++ PF ++YNT  D+WN++EL S  IQEE  L++   + A  + H G  KK GK K
Sbjct: 153  SLPSQFAPFKIHYNTNSDQWNLNELTSKCIQEEVRLRQEGHNHAFAVTH-GVTKKKGKFK 212

Query: 210  NGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             GK N    K           G+    C FC K GH +KDC+KRKAWFE +G + + VC+
Sbjct: 213  KGK-NFPPKKSGPGEGSQSHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCY 272

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            +SNL EVP NTWWID G T HV+N MQGFLTTR    +E+F++MGNR+KV V AVGTYRL
Sbjct: 273  ESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVAVGTYRL 332

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             L+TGH +DL +TFYVPSISRNL+SLSKLD +GY   F +   SL   ++ +GSGILCDG
Sbjct: 333  LLETGHRMDLLNTFYVPSISRNLVSLSKLDATGYSVLFSSGQLSLMLNSVTVGSGILCDG 392

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LYK+ L++ FA++L+TLH NVG+KRG  NE+S+ LWH+RLGHIS+ERI+RL+K  IL +L
Sbjct: 393  LYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNL 452

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIH DICGP  VP F GEKYFITFIDD
Sbjct: 453  DFTDFHVCVDCIKGKQTKHT-KKGATRSNELLEIIHIDICGPLSVPCFTGEKYFITFIDD 512

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------ 569
             SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR                  
Sbjct: 513  LSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPF 572

Query: 570  -------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYL 629
                                     ERRNR LM MVRSM+  SS+ +SLW  AL+TA Y+
Sbjct: 573  AKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYI 632

Query: 630  LNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPE 689
            LNRVPSK+VPKTPFE W  RKPSLRH+++WG   E RIYNPHEKKLDSRT SG+FIGYP+
Sbjct: 633  LNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPD 692

Query: 690  KSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP 749
            KSKGYRFYCPNHS+RI          N  ISGS EPRKV+I+E+RV+IP      +++VP
Sbjct: 693  KSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPFLPQEIIVP 752

Query: 750  VVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHES 809
              V  V + ++   +G  P  +I   E V E PQ   LRRS R RR AI+DDY+VYL ES
Sbjct: 753  QPVQQVEDNEQNNRDGSLPLENIAI-ENVVEPPQPAPLRRSQRERRPAITDDYVVYLQES 812

Query: 810  EFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVF 869
            ++D+ I  DPVSFSQA++ D+S+KW++AM EELKSM  N VWDL+ELP   K VGCKWVF
Sbjct: 813  DYDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVF 872

Query: 870  KTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQM 929
            KTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TFSPVSKKDSLRIIMALVAH+DLELHQM
Sbjct: 873  KTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQM 932

Query: 930  DVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSF 989
            DVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSF
Sbjct: 933  DVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSF 992

Query: 990  GFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEAS 1049
            GFKENIVD+CIYLK+SGSKFI L+LYVDDILLA++D GLL +TKE+LSKNF M DMGEA+
Sbjct: 993  GFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEAN 1052

Query: 1050 YVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNELE 1109
            YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  CSS +  I  GDK S MQCP+N +E
Sbjct: 1053 YVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNIE 1112

Query: 1110 RNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTK 1169
            R QM+ IPYAS VGSL+YAQTCTRPDISFAVGMLGRYQS+PG +HWKAAKKV+RYLQGTK
Sbjct: 1113 REQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTK 1172

Query: 1170 DYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTME 1229
            DYMLTYKRS+ LEV+GYSDSD+  C+D+ KST G++F+LA G ISWKS KQSI A+STME
Sbjct: 1173 DYMLTYKRSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTME 1232

Query: 1230 AEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAKHMEL 1278
            AEFVACFEA+ H LWL NFISGLG+VDSIAKPLRIYCDN+A VFFSKN K+S G+KHM+L
Sbjct: 1233 AEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDL 1292

[Close]

BLAST of Pay0013441 vs. ExPASy TrEMBL
Match: A0A438JI44 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2658 PE=4 SV=1)

HSP 1 Score: 1643.6 bits (4255), Expect = 0.0e+00
Identity = 834/1298 (64.25%), Postives = 1002/1298 (77.20%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KP   T  S+ E     KAW +SNRLSLMFMRMT+ANNIK+++  TE A EF+KSVE+  
Sbjct: 33   KPPGATDDSTPEQVEQSKAWSKSNRLSLMFMRMTIANNIKTSLPQTEFASEFLKSVEE-- 92

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSR----IILEMTNLAARLKTMGMEVNENFLVTFILN 149
            + + ADKSLAGTLM+ LT +K+DG +     IL MT  AA+LK +GM ++E+FLV F+LN
Sbjct: 93   RFKRADKSLAGTLMAELTTMKYDGQKGIQQHILNMTEKAAKLKALGMGMDESFLVQFVLN 152

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGK-K 209
            SLPS++ PF ++YNT  D+WN++EL S  IQEE  L++   + A  + H G  KK GK K
Sbjct: 153  SLPSQFAPFKIHYNTNSDQWNLNELTSKCIQEEVRLRQEGHNLAFAVTH-GVTKKKGKFK 212

Query: 210  NGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             GK N    K           G+    C FC K GH +KDC+KRKAWFE +G + + VC+
Sbjct: 213  KGK-NFPPKKSGPGEGSQSHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCY 272

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            +SNL EVP NTWWID G T HV+N MQGFLTTR    +E+F++MGNR+KV V AVGTYRL
Sbjct: 273  ESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVAVGTYRL 332

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             L+TGH +DL +TFYVPSISRNL+SLSKLD +GY   F +   SL    + +GSGILCDG
Sbjct: 333  LLETGHRMDLLNTFYVPSISRNLVSLSKLDATGYSVLFNSGQLSLMLNYVTVGSGILCDG 392

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LYK+ L++ FA++L+TLH NVG+KRG  NE+S+ LWH+RLGHIS+ERI+RL+K  IL +L
Sbjct: 393  LYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNL 452

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIHTDICGP  VP F GEKYFITFIDD
Sbjct: 453  DFTDFHVCVDCIKGKQTKHT-KKGATRSNELLEIIHTDICGPLSVPCFTGEKYFITFIDD 512

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------ 569
             SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR                  
Sbjct: 513  LSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPF 572

Query: 570  -------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYL 629
                                     ERRNR LM MVRSM+  SS+ +SLW  AL+TA Y+
Sbjct: 573  AKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYI 632

Query: 630  LNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPE 689
            LNRVPSK+VPKTPFE W  RKPSLRH+++WG   E RIYNPHEKKLDSRT SG+FIGYP+
Sbjct: 633  LNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPD 692

Query: 690  KSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP 749
            KSKGYRFYCPNHS+RI          N  ISGS EPRKV+I+E+RV+IP      +++VP
Sbjct: 693  KSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPFLPQEIIVP 752

Query: 750  VVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHES 809
              V  V + ++   +G  P  +I   E V E PQ   LRRS R RR AI+DDY+VYL ES
Sbjct: 753  QPVQQVEDNEQNNRDGSLPLENIAI-ENVVEPPQPAPLRRSQRERRPAITDDYVVYLQES 812

Query: 810  EFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVF 869
            ++D+ I  DPVSFSQA++ D+S+KW++AM EELKSM  N VWDL+ELP   K VGCKWVF
Sbjct: 813  DYDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVF 872

Query: 870  KTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQM 929
            KTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TFSPVSKKDSLRIIMALVAH+DLELHQM
Sbjct: 873  KTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQM 932

Query: 930  DVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSF 989
            DVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSF
Sbjct: 933  DVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSF 992

Query: 990  GFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEAS 1049
            GFKENIVD+CIYLK+SGSKFI L+LYVDDILLA++D GLL +TKE+LSKNF M DMGEA+
Sbjct: 993  GFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEAN 1052

Query: 1050 YVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNELE 1109
            YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  CSS +  I  GDK S MQCP+N +E
Sbjct: 1053 YVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNIE 1112

Query: 1110 RNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTK 1169
            R QM+ IPYAS VGSL+YAQTCTRPDISFAVGMLGRYQS+PG +HWKAAKKV+RYLQGTK
Sbjct: 1113 REQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTK 1172

Query: 1170 DYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTME 1229
            DYMLTYKRS+ LEV+GYSDSD+  C+D+ KST G++F+LA G ISWKS KQSI A+STME
Sbjct: 1173 DYMLTYKRSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTME 1232

Query: 1230 AEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAKHMEL 1269
            AEFVACFEA+ H LWL NFISGLG+VDSIAKPLRIYCDN+A VFFSKN K+S G+KHM+L
Sbjct: 1233 AEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDL 1292

[Close]

BLAST of Pay0013441 vs. ExPASy TrEMBL
Match: A0A438GRS4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_567 PE=4 SV=1)

HSP 1 Score: 1612.8 bits (4175), Expect = 0.0e+00
Identity = 817/1271 (64.28%), Postives = 988/1271 (77.73%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KP   T  S+ E     KAW +SNRLSLMFMRMT+ANNIK+++  TE A EF+KSVE+  
Sbjct: 33   KPPEATDDSTPEQVEQSKAWAKSNRLSLMFMRMTIANNIKTSLPQTEFASEFLKSVEE-- 92

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSR----IILEMTNLAARLKTMGMEVNENFLVTFILN 149
            + + ADKSLAGTLM+ LT +K+DG +     IL MT  AA+LK +GM ++E+FLV F+LN
Sbjct: 93   RFKRADKSLAGTLMAELTTMKYDGQKGIQQHILNMTENAAKLKALGMGMDESFLVQFVLN 152

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGK-K 209
            SLPS++ PF ++YNT  D+WN++EL S  IQEE  L++   H+  L+   G  KK GK K
Sbjct: 153  SLPSQFAPFKIHYNTNNDQWNLNELTSKCIQEEVRLRQE-GHNLALVVTHGVTKKKGKFK 212

Query: 210  NGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             GK N    K           G+    C FC K GH +KDC+KRKAWFE +G + + VC+
Sbjct: 213  KGK-NFPPKKSGPGEGSQSHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCY 272

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            +SNL EVP NTWWID G T HV+N MQGFLTTR    +E+F++MGNR+KV V  VGTYRL
Sbjct: 273  ESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVVVGTYRL 332

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             L+TGH +DL +TF VPSISRNL+SLSKLD +GY+  F +   SL   ++ IGSGILCDG
Sbjct: 333  LLETGHQMDLLNTFCVPSISRNLVSLSKLDATGYFVLFSSGQLSLMLNSVTIGSGILCDG 392

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LYK+ L++ FA++L+TLH NVG+KRG  NE+S+ LWH+RLGHIS+ERI+RL+K  IL +L
Sbjct: 393  LYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNL 452

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DFTD  +CVD IKGKQTKHT  K ATRS++LLEIIH DICGP  VP F GEKYFITFIDD
Sbjct: 453  DFTDFHVCVDYIKGKQTKHT-KKGATRSNELLEIIHIDICGPLSVPCFTGEKYFITFIDD 512

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR-----ERRNRILMN--MV 569
             SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR      R +    N    
Sbjct: 513  LSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPF 572

Query: 570  RSMLINSSLHVSLWMYALRTAQYLLNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEV 629
               L    +     M AL+TA Y+LNRVPSK+VPKTPFE W  RKPSLRH+++WG   E 
Sbjct: 573  AKFLEKRGIRAQYTMPALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAET 632

Query: 630  RIYNPHEKKLDSRTTSGFFIGYPEKSKGYRFYCPNHSMRI----------NDIISGSLEP 689
            RIYNPHEKKLDSRT SG+FIGYP+KSKGYRFYCPNHS+RI          N  ISGS EP
Sbjct: 633  RIYNPHEKKLDSRTISGYFIGYPDKSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEP 692

Query: 690  RKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEI 749
            RKV+I+E+RV+IP      +++ P  +  V + ++   +G  P  +I   E   E PQ  
Sbjct: 693  RKVDIEEIRVDIPPPFLPQEIIFPQPIQQVEDNEQHNRDGSLPLENIAI-ENAVEPPQPA 752

Query: 750  ELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSM 809
             LRRS R RR AI+DDY+VYL ES+FD+ I  DPVSFSQA++ D+S+KW++AM EELKSM
Sbjct: 753  PLRRSQRKRRLAITDDYVVYLQESDFDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSM 812

Query: 810  NDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSP 869
              N VWDL+ELP   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQ +GIDYK+TFS 
Sbjct: 813  AYNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFKARLVAKGFTQNEGIDYKDTFSL 872

Query: 870  VSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLK 929
            VSKKDSLRIIMALVAH+DLELHQMDVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK
Sbjct: 873  VSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLK 932

Query: 930  RSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATND 989
            +SIYGLKQASRQWY+KFN+TITSFGFKENIVD+CIYLK+SGSKFI L+LYVDDILLA++D
Sbjct: 933  KSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSD 992

Query: 990  FGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKC 1049
             GLL +TKE+LSKNF M DMGEA+YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  C
Sbjct: 993  LGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSC 1052

Query: 1050 SSSVVLIQNGDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGR 1109
            SS +  I  GDK S MQCP+N +ER QM+ IPYAS VGSL+YAQTCTRPDISFAVGMLGR
Sbjct: 1053 SSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGR 1112

Query: 1110 YQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYL 1169
            YQS+PG +HWKAAKKV+RYLQGTKDYMLTYKR++ LEV+GYSDSD+  C+D+ KST G++
Sbjct: 1113 YQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRTEQLEVVGYSDSDYGGCLDSLKSTSGFV 1172

Query: 1170 FLLAEGEISWKSAKQSIIAASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIY 1229
            F+LA G ISWKS KQSI A+STMEAEFVACFEA+ H LWL NFISGLG+VDSIAKPLRIY
Sbjct: 1173 FMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIY 1232

Query: 1230 CDNSATVFFSKNDKYSKGAKHMELKYFVVKEEVQKQRVSIEHISTKLMIADPLTKGLPPK 1278
            CDN+  VFFSKN K+S G+KHM+LKY VVKE VQKQ+VSIE+I T LM+ADPLTKGLPPK
Sbjct: 1233 CDNTVAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRTTLMVADPLTKGLPPK 1292

[Close]

BLAST of Pay0013441 vs. ExPASy TrEMBL
Match: A0A6D2KEK6 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS38719 PE=4 SV=1)

HSP 1 Score: 1602.0 bits (4147), Expect = 0.0e+00
Identity = 822/1311 (62.70%), Postives = 982/1311 (74.90%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            +PA IT  SS+ ++S ++ WERSNRLSL  MRMT+A +IKS++  TE A+EF++ +++CS
Sbjct: 12   EPAAITEESSEAEKSRFERWERSNRLSLNLMRMTMAESIKSSMPKTEKAREFLQKIKECS 71

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSRII----LEMTNLAARLKTMGMEVNENFLVTFILN 149
            QS  ADKS+ G+LM+ LT  KFD S+ I      M+NLAA+L T+GMEVNE+FLV FI+N
Sbjct: 72   QSDLADKSIVGSLMNELTTRKFDWSQPIHDHVTHMSNLAAKLSTLGMEVNEHFLVQFIMN 131

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGKKN 209
            SLP E+  F +NYNT+KDKWN  EL++ML+QEE  LKK   H AN +GH  A    GK +
Sbjct: 132  SLPFEFSQFQVNYNTIKDKWNFKELKAMLVQEEGRLKKMRDHVANFVGHGSASSSKGKLS 191

Query: 210  GKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCFK 269
                 G+ K          + Q + KC FC + GH++KDC KRKAWF+ KGKH++ VC +
Sbjct: 192  ---KMGKKKDKTFMKGPESQIQKERKCFFCKQVGHFKKDCPKRKAWFDKKGKHHSFVCSE 251

Query: 270  SNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRLT 329
             NL EVP NTWW+D G T HVS+  QGF + +     E+++FMGNR+K  +E +GTY+L 
Sbjct: 252  LNLIEVPNNTWWLDSGATTHVSHIKQGFSSIQPIRGPEQYLFMGNRMKARIEGIGTYKLI 311

Query: 330  LDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDGL 389
            +DT  H++L    YVP  +RNL+S+S+LD  G+ FK G+  FSL++ + F GSG L D L
Sbjct: 312  MDTSCHVNLEGCLYVPECARNLVSVSRLDNLGFDFKIGHGVFSLYRNDYFYGSGTLFDSL 371

Query: 390  YKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDLD 449
            Y+  LD  F+ESL  +    G KR  ++ESSA+LWH+RL HISKER+ RL+KNEILP LD
Sbjct: 372  YRFNLDAKFSESLFNIESR-GIKRSASDESSAFLWHQRLCHISKERMMRLVKNEILPQLD 431

Query: 450  FTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDF 509
            F+DL +C+DCIKGKQTKH V K ATRS+QLLE+IHTDICGPFD PS+ GEKYFITFIDD+
Sbjct: 432  FSDLNVCIDCIKGKQTKHVVKKPATRSTQLLELIHTDICGPFDAPSWSGEKYFITFIDDY 491

Query: 510  SRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------- 569
            SRYGY YLLHEKSQ+++ LKVFI+EVERQL+RK+K++RSDR                   
Sbjct: 492  SRYGYTYLLHEKSQSVNVLKVFIDEVERQLERKIKVVRSDRGGEFYGKFNESGQCPGPFA 551

Query: 570  ------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYLL 629
                                    ERRNR L  MVRSML NSSL +SLW+YALRTA Y+L
Sbjct: 552  KLLESKGICAQYTMPGTPQQNGVAERRNRTLKEMVRSMLSNSSLPLSLWIYALRTATYVL 611

Query: 630  NRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPEK 689
            NRVPSK+VPKTP+E W  RKPSLRHL VWG   EVR+YNPHEKKLDSRT S FFIGYPEK
Sbjct: 612  NRVPSKAVPKTPYELWTGRKPSLRHLRVWGCPAEVRLYNPHEKKLDSRTLSSFFIGYPEK 671

Query: 690  SKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVPV 749
            SKGY FYCP HS RI          N   SGS E RKV+IQE++ E+ S + S  +VVP+
Sbjct: 672  SKGYTFYCPKHSTRIVETGNARFIENGETSGSGESRKVDIQEIQDEVSSPVVSPPIVVPI 731

Query: 750  VVDSVNNPQEQQINGQTPHNDIVTNEPVT-----EGPQEIELRRSVRSRRSAISDDYLVY 809
            V    N+  EQ  +   P ++ + NEPVT       PQE  LRRS R RRSAIS+DY+VY
Sbjct: 732  VASQTNSTIEQHDDELIPPDNNIINEPVTIQEENSAPQE-PLRRSGRERRSAISNDYMVY 791

Query: 810  LHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGC 869
              ESE DLSID  P SF +A++                           +LP   K VG 
Sbjct: 792  AIESECDLSIDEYPKSFQEAME---------------------------KLPDGFKTVGS 851

Query: 870  KWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLE 929
            KW++  KRDS G I+RYKA LVAKG+TQKDGIDYKETFS VSKKDSLRI++AL+A YDLE
Sbjct: 852  KWIYTIKRDSKGAIDRYKAHLVAKGFTQKDGIDYKETFSSVSKKDSLRIVLALIAQYDLE 911

Query: 930  LHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDT 989
            LHQMD+KTAFLNG+L+EEV+MDQPEGF+V GKEHMVCKL++SIYGLKQASRQWYLKFNDT
Sbjct: 912  LHQMDLKTAFLNGDLEEEVYMDQPEGFVVAGKEHMVCKLRKSIYGLKQASRQWYLKFNDT 971

Query: 990  ITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDM 1049
            ITS+GF E IVDRCIY+KISGSKFI+LVLYVDDILLA ND G+L  TK++LSKNFEMKDM
Sbjct: 972  ITSYGFVEVIVDRCIYVKISGSKFIMLVLYVDDILLAANDMGMLHDTKKYLSKNFEMKDM 1031

Query: 1050 GEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPK 1109
            GEASYVIGIEIFRDR+ GLL LSQK YINK+LE++KM+KCS+ +  IQ GDKFS MQCPK
Sbjct: 1032 GEASYVIGIEIFRDRSQGLLSLSQKGYINKILERYKMEKCSAGIAPIQKGDKFSKMQCPK 1091

Query: 1110 NELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYL 1169
            NELER +ME IPYAS+VGSL Y QTCTRPDI+FAVGMLGRYQSNPGMDHWKAAKKVLRYL
Sbjct: 1092 NELERKEMERIPYASVVGSLNYVQTCTRPDITFAVGMLGRYQSNPGMDHWKAAKKVLRYL 1151

Query: 1170 QGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAA 1229
            QGTK++MLT++RS+HLE+IGYSDSD+A CVD+RKSTFGYLF LA G +SWKS KQS+IA 
Sbjct: 1152 QGTKEHMLTFRRSNHLEIIGYSDSDYAGCVDSRKSTFGYLFQLAGGAVSWKSGKQSVIAT 1211

Query: 1230 STMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAK 1278
            STMEAEFVACFEAT+H LWL NFISGL IVD+I KPLRIYCDNSA VFFSKNDKYSKGAK
Sbjct: 1212 STMEAEFVACFEATIHALWLRNFISGLQIVDNIEKPLRIYCDNSAAVFFSKNDKYSKGAK 1271

[Close]

BLAST of Pay0013441 vs. NCBI nr
Match: RZC25410.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja])

HSP 1 Score: 1883.6 bits (4878), Expect = 0.0e+00
Identity = 953/1309 (72.80%), Postives = 1082/1309 (82.66%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KPATIT ASS+E ++ YKAWERSNRLSLMFMRMTVA++IK+ +  T+ AKEFM  V +  
Sbjct: 110  KPATITDASSNEQKAHYKAWERSNRLSLMFMRMTVADSIKTALPKTDSAKEFMGLVGE-- 169

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSRI----ILEMTNLAARLKTMGMEVNENFLVTFILN 149
            +SQ+ADKSLAGTLMSTLT +KFDGSR     ++EMTN+AARLKT+GM VNENFLV FILN
Sbjct: 170  RSQTADKSLAGTLMSTLTTMKFDGSRTMHEHVIEMTNIAARLKTLGMAVNENFLVQFILN 229

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHK---GAGKKPG 209
            SLPSEYGPF M+YNT+KDKWNVHEL SML+QEE  LK    HS + + H+   GAGKK  
Sbjct: 230  SLPSEYGPFQMSYNTMKDKWNVHELHSMLVQEETRLKNQGSHSIHYVSHRGNQGAGKKFV 289

Query: 210  KKNGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASV 269
            KK+ KG  G LK+      I KK    + C FC K GH+QKDC KRK+WFE KG+ NA V
Sbjct: 290  KKHDKGK-GPLKIKDGPVQIQKKASKNNNCHFCGKSGHFQKDCPKRKSWFEKKGELNALV 349

Query: 270  CFKSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTY 329
            CF+SNLTEVP+NTWWID GCT HVSNTMQGFLT +T +PNE+F+FMGNRVK PVEAVGTY
Sbjct: 350  CFESNLTEVPHNTWWIDSGCTTHVSNTMQGFLTIQTISPNEKFVFMGNRVKAPVEAVGTY 409

Query: 330  RLTLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILC 389
            RL LDTGHHLDL +T YVPS+SRNL+SLSKLD +GY F FGN CFSLFK N  IG+G+LC
Sbjct: 410  RLKLDTGHHLDLLETLYVPSLSRNLVSLSKLDITGYSFNFGNGCFSLFKYNHLIGTGVLC 469

Query: 390  DGLYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILP 449
            DGLYKLKLD ++ E++LTLHHNVGTKR   NE SA+LWHKRLGHIS ERI+RLIKNEILP
Sbjct: 470  DGLYKLKLDGLYVETVLTLHHNVGTKRSLVNERSAFLWHKRLGHISGERIERLIKNEILP 529

Query: 450  DLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFI 509
            DLDFTDL ICVDCIKGKQTKHT  K ATRS+QLLEI+HTDICGPFDV SFG E+YFITFI
Sbjct: 530  DLDFTDLNICVDCIKGKQTKHT-KKGATRSTQLLEIVHTDICGPFDVSSFGRERYFITFI 589

Query: 510  DDFSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR---------------- 569
            DD+SRYGY+YLLHEKSQA++AL++++NEVERQLDRKVKI+RSDR                
Sbjct: 590  DDYSRYGYVYLLHEKSQAVNALEIYLNEVERQLDRKVKIIRSDRGGEYYRRYDETGQHPS 649

Query: 570  ---------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQ 629
                                       ERRN+ LM+MVRSMLINS+L VSLWMYAL+TA 
Sbjct: 650  PFAKLLQKRGICAQYTMPGTPQQNGVSERRNKTLMDMVRSMLINSTLPVSLWMYALKTAM 709

Query: 630  YLLNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGY 689
            YLLNRVPSK+VPKTPFE W  R PS+RHL+VWG Q E+RIYNP E+KLD+RT SG+FIGY
Sbjct: 710  YLLNRVPSKAVPKTPFELWTNRTPSMRHLHVWGCQAEIRIYNPQERKLDARTISGYFIGY 769

Query: 690  PEKSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVV 749
            PEKSKGY FYCPNHS RI          N  ISGS  PR+VEI+EVRV++P +  SS  V
Sbjct: 770  PEKSKGYMFYCPNHSTRIVETGNARFIENGEISGSTVPREVEIKEVRVQVPLAFASSSKV 829

Query: 750  VPVVVDSVNNPQEQQINGQTPHND--IVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVY 809
            +   V + N+ +E Q      HND  ++ NEP+ E PQE+ LR+S R RR AIS+DY+VY
Sbjct: 830  ITTSVTATNSNEEVQ------HNDEPMIHNEPIMEEPQEVALRKSQRERRPAISNDYVVY 889

Query: 810  LHESEFDLSI-DNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVG 869
            LHE+E +LSI DNDPVSFSQAI  DNS KWL+AMKEE+ SM  N+VWDLVELPK  KRVG
Sbjct: 890  LHETETNLSINDNDPVSFSQAISCDNSEKWLNAMKEEIDSMEHNDVWDLVELPKGCKRVG 949

Query: 870  CKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDL 929
             KWVFKTKRDS+GN+ERYKARLVAKG+TQKDGIDYKETFSPVS+KDS RIIMALVAHYDL
Sbjct: 950  YKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKETFSPVSRKDSFRIIMALVAHYDL 1009

Query: 930  ELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFND 989
            ELHQMDVKTAFLNG+L+E+V+MDQP GF VEGKEHMVCKLK+SIYGLKQASRQWYLKFND
Sbjct: 1010 ELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQASRQWYLKFND 1069

Query: 990  TITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKD 1049
            TI SFGFKEN VDRC+YLK+SGSK + LVLYVDDILLATND GL  +TK+FLS NFEMKD
Sbjct: 1070 TIVSFGFKENTVDRCVYLKVSGSKVMFLVLYVDDILLATNDLGLFHETKKFLSSNFEMKD 1129

Query: 1050 MGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCP 1109
            MGEASYVIGIEIFR+R+ GLLGLSQKAYINKVLE+F+M+KCS+S V IQ GDKFSL QCP
Sbjct: 1130 MGEASYVIGIEIFRNRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKGDKFSLAQCP 1189

Query: 1110 KNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRY 1169
            KN+LER QME IPYAS+VGS++YAQTCTRPDISFA GMLGRYQSNPGM+HWKAAKKVLRY
Sbjct: 1190 KNDLERKQMEAIPYASVVGSIMYAQTCTRPDISFATGMLGRYQSNPGMEHWKAAKKVLRY 1249

Query: 1170 LQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIA 1229
            LQGTKD++LTYKRSDHLEVIGYSDSDFA CVDTRKST G++FLLA G ISWKSAKQS++A
Sbjct: 1250 LQGTKDHILTYKRSDHLEVIGYSDSDFAGCVDTRKSTLGFVFLLAGGAISWKSAKQSVVA 1309

Query: 1230 ASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGA 1275
            ASTMEA FVACFEAT+   WL NFISGLGIVDSIA+PL++YCDNSA VFFSKNDKYS GA
Sbjct: 1310 ASTMEAAFVACFEATIQANWLRNFISGLGIVDSIARPLKMYCDNSAAVFFSKNDKYSTGA 1369

[Close]

BLAST of Pay0013441 vs. NCBI nr
Match: KAG7564986.1 (Integrase catalytic core [Arabidopsis suecica])

HSP 1 Score: 1664.0 bits (4308), Expect = 0.0e+00
Identity = 855/1313 (65.12%), Postives = 1006/1313 (76.62%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            +P+ IT  SS+ ++S Y++WERSNRLSL  MRMT+A ++K ++  TE A+EF+K +++CS
Sbjct: 48   EPSAITEESSETEKSRYESWERSNRLSLNLMRMTMAESVKPSMPKTEKAREFIKKIKECS 107

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSRII----LEMTNLAARLKTMGMEVNENFLVTFILN 149
            QS  ADKS+ G LMS LT  KFD S+ I      M+NLA++L T+GMEV+E FLV FI+N
Sbjct: 108  QSDLADKSIVGGLMSELTTKKFDWSQPIHDHVTHMSNLASKLTTLGMEVHEPFLVQFIMN 167

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGKKN 209
            SLP E+  F +NYNT+KDKWN  EL++ML+QEE  LKK     A+L+G   A  + GK +
Sbjct: 168  SLPLEFSQFQVNYNTIKDKWNYQELKAMLVQEEGRLKKMKDQVAHLVGLGSASSRKGKSS 227

Query: 210  GKGNH-GQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             K     +  V    + IHK    + KC FC K GH++KDC KRKAWF+ KG  +  VC 
Sbjct: 228  IKDKKMDKTFVKGPESQIHK----ERKCFFCKKMGHFKKDCPKRKAWFDKKGTQHIYVCS 287

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            + NL EVP NTWW+D G T HVS+  QGF + +     ++++FMGNR+K  +E +GTYRL
Sbjct: 288  ELNLIEVPNNTWWLDSGATTHVSHIEQGFSSIQPIRGADQYLFMGNRMKARIEGIGTYRL 347

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             LDTG H+DL    YVP  SRNL+S+S+LD  G+ FK G+  FSL++ +   GSG L D 
Sbjct: 348  ILDTGCHVDLEGCLYVPECSRNLVSVSRLDNLGFVFKIGHGVFSLYRNDYLYGSGTLFDS 407

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LY+  LD  F+ESL  +  + G KR  +NESSA+LWH+RLGHISKERI RL+KN+ILP L
Sbjct: 408  LYRFNLDAKFSESLFNI-ESQGIKRSASNESSAFLWHQRLGHISKERIMRLVKNDILPQL 467

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DF+DL +C+DCIKGKQTKH V K ATRS+QLLE+IHTDICGPFD PS+ GEKYFITFIDD
Sbjct: 468  DFSDLNVCIDCIKGKQTKHIVKKPATRSTQLLELIHTDICGPFDAPSWSGEKYFITFIDD 527

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------ 569
            +SRYG+ YLLHEKS++++ L+VFI+EVERQLDRKVK++RSDR                  
Sbjct: 528  YSRYGFTYLLHEKSKSVNILEVFIDEVERQLDRKVKVVRSDRGGEFYGKFTESGQCPGPF 587

Query: 570  -------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYL 629
                                     ERRNR LM+MVRSML NSSL +SLW+YAL+TA Y+
Sbjct: 588  AKLLESRGICAQYTMPGTPQQNGVAERRNRTLMDMVRSMLSNSSLPLSLWIYALKTATYV 647

Query: 630  LNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPE 689
            LNRVPSK+VPKTPFE W  RKPSLRHL VWG   EV+ YNPHEKKLDSRT SGFFIGYPE
Sbjct: 648  LNRVPSKAVPKTPFELWTGRKPSLRHLRVWGCPAEVKSYNPHEKKLDSRTVSGFFIGYPE 707

Query: 690  KSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP 749
            KSKGY FYCPNHS RI          N   SGS E RKV+IQE++VE+ S    S+VVVP
Sbjct: 708  KSKGYTFYCPNHSTRIVETGNARFIENGQTSGSGESRKVDIQEIQVEVSSPDVPSKVVVP 767

Query: 750  VVVDSVNNPQEQQINGQTPHNDIVTNEPVT------EGPQEIELRRSVRSRRSAISDDYL 809
            +V    N+  EQ  +   P ++   NEPVT        PQE  LRRS R RRSAIS+DY+
Sbjct: 768  IVSVQSNDTIEQHDDVPIPLDEGTINEPVTIQEENNSVPQE-PLRRSGRERRSAISNDYV 827

Query: 810  VYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRV 869
            VY  ESE D+S+D DP++F +A++ DNS KW  A KEE+KSM DN+VWDLVELP   K V
Sbjct: 828  VYAIESECDISLDEDPITFRKAMESDNSEKWSIAAKEEIKSMGDNDVWDLVELPNGFKTV 887

Query: 870  GCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYD 929
            G KWVFKTKRDS GNIERYKARLVAKG+TQKDGIDYKETFSPVSKKDSLRI++ LVAHYD
Sbjct: 888  GSKWVFKTKRDSKGNIERYKARLVAKGFTQKDGIDYKETFSPVSKKDSLRIVLGLVAHYD 947

Query: 930  LELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFN 989
            LELHQMDVKTAFLNG L+EEV+MDQPEGF+  G EH+VCKLK+SIYGLKQASRQWYLKFN
Sbjct: 948  LELHQMDVKTAFLNGELEEEVYMDQPEGFVATGNEHLVCKLKKSIYGLKQASRQWYLKFN 1007

Query: 990  DTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMK 1049
            DTITS+GF E IVDRCIY+K+SGSKF+ILVLYVDDILLA ND G+L   K++LSKNFEMK
Sbjct: 1008 DTITSYGFVEVIVDRCIYIKVSGSKFVILVLYVDDILLAANDMGMLHDIKKYLSKNFEMK 1067

Query: 1050 DMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQC 1109
            DMGEASYVIGIEI RDR+ GLL LSQK YINK+LE+++MD+CS+    IQ GDKFS MQC
Sbjct: 1068 DMGEASYVIGIEIIRDRSQGLLSLSQKGYINKILERYRMDECSAGKAPIQKGDKFSKMQC 1127

Query: 1110 PKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLR 1169
            P+NELER +ME IPYAS+VGSL Y QTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLR
Sbjct: 1128 PRNELERKEMERIPYASVVGSLNYVQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLR 1187

Query: 1170 YLQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSII 1229
            YLQGTK+ MLTY+RSD+LEVIGYSDSD+A CVD+RKSTFGYLFLLA G ISWKS KQS+I
Sbjct: 1188 YLQGTKELMLTYRRSDNLEVIGYSDSDYAGCVDSRKSTFGYLFLLAGGAISWKSGKQSVI 1247

Query: 1230 AASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKG 1278
            A STMEAEFVACFEAT+H LWL NFISGL IVDSI KPLRIYCDNSA VFFSKNDKYSKG
Sbjct: 1248 ATSTMEAEFVACFEATIHALWLRNFISGLRIVDSIEKPLRIYCDNSAAVFFSKNDKYSKG 1307

[Close]

BLAST of Pay0013441 vs. NCBI nr
Match: RVW55286.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1654.8 bits (4284), Expect = 0.0e+00
Identity = 838/1307 (64.12%), Postives = 1009/1307 (77.20%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KP   T  S+ E     KAW +SNRLSLMFMRMT+ANNIK+++  TE A EF+KSVE+  
Sbjct: 33   KPPEATDDSTPEQVEQSKAWSKSNRLSLMFMRMTIANNIKTSLPQTEFASEFLKSVEE-- 92

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSR----IILEMTNLAARLKTMGMEVNENFLVTFILN 149
            + + ADKSLAGTLM+ LT +K+DG +     IL MT  AA+LK +GM ++E+FLV F+LN
Sbjct: 93   RFKRADKSLAGTLMAELTTMKYDGQKGIQQHILNMTEKAAKLKALGMGMDESFLVQFVLN 152

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGK-K 209
            SLPS++ PF ++YNT  D+WN++EL S  IQEE  L++   + A  + H G  KK GK K
Sbjct: 153  SLPSQFAPFKIHYNTNSDQWNLNELTSKCIQEEVRLRQEGHNHAFAVTH-GVTKKKGKFK 212

Query: 210  NGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             GK N    K           G+    C FC K GH +KDC+KRKAWFE +G + + VC+
Sbjct: 213  KGK-NFPPKKSGPGEGSQSHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCY 272

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            +SNL EVP NTWWID G T HV+N MQGFLTTR    +E+F++MGNR+KV V AVGTYRL
Sbjct: 273  ESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVAVGTYRL 332

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             L+TGH +DL +TFYVPSISRNL+SLSKLD +GY   F +   SL   ++ +GSGILCDG
Sbjct: 333  LLETGHRMDLLNTFYVPSISRNLVSLSKLDATGYSVLFSSGQLSLMLNSVTVGSGILCDG 392

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LYK+ L++ FA++L+TLH NVG+KRG  NE+S+ LWH+RLGHIS+ERI+RL+K  IL +L
Sbjct: 393  LYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNL 452

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIH DICGP  VP F GEKYFITFIDD
Sbjct: 453  DFTDFHVCVDCIKGKQTKHT-KKGATRSNELLEIIHIDICGPLSVPCFTGEKYFITFIDD 512

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------ 569
             SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR                  
Sbjct: 513  LSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPF 572

Query: 570  -------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYL 629
                                     ERRNR LM MVRSM+  SS+ +SLW  AL+TA Y+
Sbjct: 573  AKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYI 632

Query: 630  LNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPE 689
            LNRVPSK+VPKTPFE W  RKPSLRH+++WG   E RIYNPHEKKLDSRT SG+FIGYP+
Sbjct: 633  LNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPD 692

Query: 690  KSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP 749
            KSKGYRFYCPNHS+RI          N  ISGS EPRKV+I+E+RV+IP      +++VP
Sbjct: 693  KSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPFLPQEIIVP 752

Query: 750  VVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHES 809
              V  V + ++   +G  P  +I   E V E PQ   LRRS R RR AI+DDY+VYL ES
Sbjct: 753  QPVQQVEDNEQNNRDGSLPLENIAI-ENVVEPPQPAPLRRSQRERRPAITDDYVVYLQES 812

Query: 810  EFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVF 869
            ++D+ I  DPVSFSQA++ D+S+KW++AM EELKSM  N VWDL+ELP   K VGCKWVF
Sbjct: 813  DYDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVF 872

Query: 870  KTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQM 929
            KTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TFSPVSKKDSLRIIMALVAH+DLELHQM
Sbjct: 873  KTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQM 932

Query: 930  DVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSF 989
            DVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSF
Sbjct: 933  DVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSF 992

Query: 990  GFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEAS 1049
            GFKENIVD+CIYLK+SGSKFI L+LYVDDILLA++D GLL +TKE+LSKNF M DMGEA+
Sbjct: 993  GFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEAN 1052

Query: 1050 YVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNELE 1109
            YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  CSS +  I  GDK S MQCP+N +E
Sbjct: 1053 YVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNIE 1112

Query: 1110 RNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTK 1169
            R QM+ IPYAS VGSL+YAQTCTRPDISFAVGMLGRYQS+PG +HWKAAKKV+RYLQGTK
Sbjct: 1113 REQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTK 1172

Query: 1170 DYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTME 1229
            DYMLTYKRS+ LEV+GYSDSD+  C+D+ KST G++F+LA G ISWKS KQSI A+STME
Sbjct: 1173 DYMLTYKRSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTME 1232

Query: 1230 AEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAKHMEL 1278
            AEFVACFEA+ H LWL NFISGLG+VDSIAKPLRIYCDN+A VFFSKN K+S G+KHM+L
Sbjct: 1233 AEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDL 1292

[Close]

BLAST of Pay0013441 vs. NCBI nr
Match: RVX08602.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1643.6 bits (4255), Expect = 0.0e+00
Identity = 834/1298 (64.25%), Postives = 1002/1298 (77.20%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KP   T  S+ E     KAW +SNRLSLMFMRMT+ANNIK+++  TE A EF+KSVE+  
Sbjct: 33   KPPGATDDSTPEQVEQSKAWSKSNRLSLMFMRMTIANNIKTSLPQTEFASEFLKSVEE-- 92

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSR----IILEMTNLAARLKTMGMEVNENFLVTFILN 149
            + + ADKSLAGTLM+ LT +K+DG +     IL MT  AA+LK +GM ++E+FLV F+LN
Sbjct: 93   RFKRADKSLAGTLMAELTTMKYDGQKGIQQHILNMTEKAAKLKALGMGMDESFLVQFVLN 152

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGK-K 209
            SLPS++ PF ++YNT  D+WN++EL S  IQEE  L++   + A  + H G  KK GK K
Sbjct: 153  SLPSQFAPFKIHYNTNSDQWNLNELTSKCIQEEVRLRQEGHNLAFAVTH-GVTKKKGKFK 212

Query: 210  NGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             GK N    K           G+    C FC K GH +KDC+KRKAWFE +G + + VC+
Sbjct: 213  KGK-NFPPKKSGPGEGSQSHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCY 272

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            +SNL EVP NTWWID G T HV+N MQGFLTTR    +E+F++MGNR+KV V AVGTYRL
Sbjct: 273  ESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVAVGTYRL 332

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             L+TGH +DL +TFYVPSISRNL+SLSKLD +GY   F +   SL    + +GSGILCDG
Sbjct: 333  LLETGHRMDLLNTFYVPSISRNLVSLSKLDATGYSVLFNSGQLSLMLNYVTVGSGILCDG 392

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LYK+ L++ FA++L+TLH NVG+KRG  NE+S+ LWH+RLGHIS+ERI+RL+K  IL +L
Sbjct: 393  LYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNL 452

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIHTDICGP  VP F GEKYFITFIDD
Sbjct: 453  DFTDFHVCVDCIKGKQTKHT-KKGATRSNELLEIIHTDICGPLSVPCFTGEKYFITFIDD 512

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR------------------ 569
             SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR                  
Sbjct: 513  LSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPF 572

Query: 570  -------------------------ERRNRILMNMVRSMLINSSLHVSLWMYALRTAQYL 629
                                     ERRNR LM MVRSM+  SS+ +SLW  AL+TA Y+
Sbjct: 573  AKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTAMYI 632

Query: 630  LNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEVRIYNPHEKKLDSRTTSGFFIGYPE 689
            LNRVPSK+VPKTPFE W  RKPSLRH+++WG   E RIYNPHEKKLDSRT SG+FIGYP+
Sbjct: 633  LNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIGYPD 692

Query: 690  KSKGYRFYCPNHSMRI----------NDIISGSLEPRKVEIQEVRVEIPSSITSSQVVVP 749
            KSKGYRFYCPNHS+RI          N  ISGS EPRKV+I+E+RV+IP      +++VP
Sbjct: 693  KSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPFLPQEIIVP 752

Query: 750  VVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHES 809
              V  V + ++   +G  P  +I   E V E PQ   LRRS R RR AI+DDY+VYL ES
Sbjct: 753  QPVQQVEDNEQNNRDGSLPLENIAI-ENVVEPPQPAPLRRSQRERRPAITDDYVVYLQES 812

Query: 810  EFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVF 869
            ++D+ I  DPVSFSQA++ D+S+KW++AM EELKSM  N VWDL+ELP   K VGCKWVF
Sbjct: 813  DYDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVF 872

Query: 870  KTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQM 929
            KTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TFSPVSKKDSLRIIMALVAH+DLELHQM
Sbjct: 873  KTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQM 932

Query: 930  DVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSF 989
            DVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSF
Sbjct: 933  DVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSF 992

Query: 990  GFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEAS 1049
            GFKENIVD+CIYLK+SGSKFI L+LYVDDILLA++D GLL +TKE+LSKNF M DMGEA+
Sbjct: 993  GFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEAN 1052

Query: 1050 YVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNELE 1109
            YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  CSS +  I  GDK S MQCP+N +E
Sbjct: 1053 YVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNIE 1112

Query: 1110 RNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTK 1169
            R QM+ IPYAS VGSL+YAQTCTRPDISFAVGMLGRYQS+PG +HWKAAKKV+RYLQGTK
Sbjct: 1113 REQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTK 1172

Query: 1170 DYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTME 1229
            DYMLTYKRS+ LEV+GYSDSD+  C+D+ KST G++F+LA G ISWKS KQSI A+STME
Sbjct: 1173 DYMLTYKRSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTME 1232

Query: 1230 AEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAKHMEL 1269
            AEFVACFEA+ H LWL NFISGLG+VDSIAKPLRIYCDN+A VFFSKN K+S G+KHM+L
Sbjct: 1233 AEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDL 1292

[Close]

BLAST of Pay0013441 vs. NCBI nr
Match: RVW74882.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1612.8 bits (4175), Expect = 0.0e+00
Identity = 817/1271 (64.28%), Postives = 988/1271 (77.73%), Query Frame = 0


Query: 30   KPATITSASSDEDRSFYKAWERSNRLSLMFMRMTVANNIKSTIKNTEDAKEFMKSVEKCS 89
            KP   T  S+ E     KAW +SNRLSLMFMRMT+ANNIK+++  TE A EF+KSVE+  
Sbjct: 33   KPPEATDDSTPEQVEQSKAWAKSNRLSLMFMRMTIANNIKTSLPQTEFASEFLKSVEE-- 92

Query: 90   QSQSADKSLAGTLMSTLTNIKFDGSR----IILEMTNLAARLKTMGMEVNENFLVTFILN 149
            + + ADKSLAGTLM+ LT +K+DG +     IL MT  AA+LK +GM ++E+FLV F+LN
Sbjct: 93   RFKRADKSLAGTLMAELTTMKYDGQKGIQQHILNMTENAAKLKALGMGMDESFLVQFVLN 152

Query: 150  SLPSEYGPFHMNYNTLKDKWNVHELQSMLIQEEAGLKKPIIHSANLMGHKGAGKKPGK-K 209
            SLPS++ PF ++YNT  D+WN++EL S  IQEE  L++   H+  L+   G  KK GK K
Sbjct: 153  SLPSQFAPFKIHYNTNNDQWNLNELTSKCIQEEVRLRQE-GHNLALVVTHGVTKKKGKFK 212

Query: 210  NGKGNHGQLKVNQSSAPIHKKGQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNASVCF 269
             GK N    K           G+    C FC K GH +KDC+KRKAWFE +G + + VC+
Sbjct: 213  KGK-NFPPKKSGPGEGSQSHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCY 272

Query: 270  KSNLTEVPYNTWWIDFGCTIHVSNTMQGFLTTRTTNPNERFIFMGNRVKVPVEAVGTYRL 329
            +SNL EVP NTWWID G T HV+N MQGFLTTR    +E+F++MGNR+KV V  VGTYRL
Sbjct: 273  ESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVVVGTYRL 332

Query: 330  TLDTGHHLDLFDTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNIFIGSGILCDG 389
             L+TGH +DL +TF VPSISRNL+SLSKLD +GY+  F +   SL   ++ IGSGILCDG
Sbjct: 333  LLETGHQMDLLNTFCVPSISRNLVSLSKLDATGYFVLFSSGQLSLMLNSVTIGSGILCDG 392

Query: 390  LYKLKLDNVFAESLLTLHHNVGTKRGQTNESSAYLWHKRLGHISKERIKRLIKNEILPDL 449
            LYK+ L++ FA++L+TLH NVG+KRG  NE+S+ LWH+RLGHIS+ERI+RL+K  IL +L
Sbjct: 393  LYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGILQNL 452

Query: 450  DFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDD 509
            DFTD  +CVD IKGKQTKHT  K ATRS++LLEIIH DICGP  VP F GEKYFITFIDD
Sbjct: 453  DFTDFHVCVDYIKGKQTKHT-KKGATRSNELLEIIHIDICGPLSVPCFTGEKYFITFIDD 512

Query: 510  FSRYGYIYLLHEKSQAIDALKVFINEVERQLDRKVKILRSDR-----ERRNRILMN--MV 569
             SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR      R +    N    
Sbjct: 513  LSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDRGGEYYGRYDESGQNPGPF 572

Query: 570  RSMLINSSLHVSLWMYALRTAQYLLNRVPSKSVPKTPFE-WIRRKPSLRHLYVWGYQVEV 629
               L    +     M AL+TA Y+LNRVPSK+VPKTPFE W  RKPSLRH+++WG   E 
Sbjct: 573  AKFLEKRGIRAQYTMPALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAET 632

Query: 630  RIYNPHEKKLDSRTTSGFFIGYPEKSKGYRFYCPNHSMRI----------NDIISGSLEP 689
            RIYNPHEKKLDSRT SG+FIGYP+KSKGYRFYCPNHS+RI          N  ISGS EP
Sbjct: 633  RIYNPHEKKLDSRTISGYFIGYPDKSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEP 692

Query: 690  RKVEIQEVRVEIPSSITSSQVVVPVVVDSVNNPQEQQINGQTPHNDIVTNEPVTEGPQEI 749
            RKV+I+E+RV+IP      +++ P  +  V + ++   +G  P  +I   E   E PQ  
Sbjct: 693  RKVDIEEIRVDIPPPFLPQEIIFPQPIQQVEDNEQHNRDGSLPLENIAI-ENAVEPPQPA 752

Query: 750  ELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSM 809
             LRRS R RR AI+DDY+VYL ES+FD+ I  DPVSFSQA++ D+S+KW++AM EELKSM
Sbjct: 753  PLRRSQRKRRLAITDDYVVYLQESDFDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSM 812

Query: 810  NDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSP 869
              N VWDL+ELP   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQ +GIDYK+TFS 
Sbjct: 813  AYNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFKARLVAKGFTQNEGIDYKDTFSL 872

Query: 870  VSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLK 929
            VSKKDSLRIIMALVAH+DLELHQMDVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK
Sbjct: 873  VSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLK 932

Query: 930  RSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATND 989
            +SIYGLKQASRQWY+KFN+TITSFGFKENIVD+CIYLK+SGSKFI L+LYVDDILLA++D
Sbjct: 933  KSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSD 992

Query: 990  FGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKC 1049
             GLL +TKE+LSKNF M DMGEA+YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  C
Sbjct: 993  LGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSC 1052

Query: 1050 SSSVVLIQNGDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGR 1109
            SS +  I  GDK S MQCP+N +ER QM+ IPYAS VGSL+YAQTCTRPDISFAVGMLGR
Sbjct: 1053 SSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGR 1112

Query: 1110 YQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFARCVDTRKSTFGYL 1169
            YQS+PG +HWKAAKKV+RYLQGTKDYMLTYKR++ LEV+GYSDSD+  C+D+ KST G++
Sbjct: 1113 YQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRTEQLEVVGYSDSDYGGCLDSLKSTSGFV 1172

Query: 1170 FLLAEGEISWKSAKQSIIAASTMEAEFVACFEATVHGLWLWNFISGLGIVDSIAKPLRIY 1229
            F+LA G ISWKS KQSI A+STMEAEFVACFEA+ H LWL NFISGLG+VDSIAKPLRIY
Sbjct: 1173 FMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIY 1232

Query: 1230 CDNSATVFFSKNDKYSKGAKHMELKYFVVKEEVQKQRVSIEHISTKLMIADPLTKGLPPK 1278
            CDN+  VFFSKN K+S G+KHM+LKY VVKE VQKQ+VSIE+I T LM+ADPLTKGLPPK
Sbjct: 1233 CDNTVAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRTTLMVADPLTKGLPPK 1292

[Close]

BLAST of Pay0013441 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 343.2 bits (879), Expect = 9.0e-94
Identity = 182/467 (38.97%), Postives = 278/467 (59.53%), Query Frame = 0


Query: 775  WLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQ 834
            W  AM +E+ +M     W++  LP   K +GCKWV+K K +S+G IERYKARLVAKGYTQ
Sbjct: 98   WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 835  KDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFM 894
            ++GID+ ETFSPV K  S+++I+A+ A Y+  LHQ+D+  AFLNG+LDEE++M  P G+ 
Sbjct: 158  QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217

Query: 895  VEGKEHM----VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKF 954
                + +    VC LK+SIYGLKQASRQW+LKF+ T+  FGF ++  D   +LKI+ + F
Sbjct: 218  ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277

Query: 955  IILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTHGLLGLSQ 1014
            + +++YVDDI++ +N+   + + K  L   F+++D+G   Y +G+EI R      + + Q
Sbjct: 278  LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQ 337

Query: 1015 KAYINKVLEKFKMDKCSSSVVLIQNGDKFSLMQCPKNELERNQMETIPYASIVGSLLYAQ 1074
            + Y   +L++  +  C  S V +     FS           + ++   Y  ++G L+Y Q
Sbjct: 338  RKYALDLLDETGLLGCKPSSVPMDPSVTFSA------HSGGDFVDAKAYRRLIGRLMYLQ 397

Query: 1075 TCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDS 1134
              TR DISFAV  L ++   P + H +A  K+L Y++GT    L Y     +++  +SD+
Sbjct: 398  -ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 457

Query: 1135 DFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTMEAEFVACFEATVHGLWLWNFI 1194
             F  C DTR+ST GY   L    ISWKS KQ +++ S+ EAE+ A   AT   +WL  F 
Sbjct: 458  SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 517

Query: 1195 SGLGIVDSIAKPLRIYCDNSATVFFSKNDKYSKGAKHMELKYFVVKE 1238
              L +   ++KP  ++CDN+A +  + N  + +  KH+E     V+E
Sbjct: 518  RELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Pay0013441 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 5.2e-25
Identity = 80/226 (35.40%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 953  LVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTH-GLLGLSQK 1012
            L+LYVDDILL  +   LL      LS  F MKD+G   Y +GI+I   +TH   L LSQ 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI---KTHPSGLFLSQT 62

Query: 1013 AYINKVLEKFKMDKCS--SSVVLIQNGDKFSLMQCPKNELERNQMETIPYASIVGSLLYA 1072
             Y  ++L    M  C   S+ + ++     S  + P         +   + SIVG+L Y 
Sbjct: 63   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP---------DPSDFRSIVGALQYL 122

Query: 1073 QTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSD 1132
             T TRPDIS+AV ++ +    P +  +   K+VLRY++GT  + L   ++  L V  + D
Sbjct: 123  -TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 182

Query: 1133 SDFARCVDTRKSTFGYLFLLAEGEISWKSAKQSIIAASTMEAEFVA 1176
            SD+A C  TR+ST G+   L    ISW + +Q  ++ S+ E E+ A
Sbjct: 183  SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

[Close]

BLAST of Pay0013441 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 755 SIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKR 814
           +I  +P S   A+K      W  AM+EEL +++ N+ W LV  P     +GCKWVFKTK 
Sbjct: 23  TIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKL 82

Query: 815 DSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIM 858
            S+G ++R KARLVAKG+ Q++GI + ET+SPV +  ++R I+
Sbjct: 83  HSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122

[Close]

BLAST of Pay0013441 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 1071 TCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDS 1130
            T TRPD++FAV  L ++ S       +A  KVL Y++GT    L Y  +  L++  ++DS
Sbjct: 4    TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADS 63

Query: 1131 DFARCVDTRKSTFGYLFLL 1150
            D+A C DTR+S  G+  L+
Sbjct: 64   DWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Pay0013441 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.0e-187	33.59	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.5e-133	27.74	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	5.7e-117	26.39	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.8e-115	26.14	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	6.2e-39	31.63	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Pay0013441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A445LQ30	0.0e+00	72.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Glycine soja OX=3...	[more]
A0A438F5W4	0.0e+00	64.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438JI44	0.0e+00	64.25	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438GRS4	0.0e+00	64.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A6D2KEK6	0.0e+00	62.70	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS38719 ...	[more]

BLAST of Pay0013441 vs. NCBI nr


Match Name	E-value	Identity	Description
RZC25410.1	0.0e+00	72.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]	[more]
KAG7564986.1	0.0e+00	65.12	Integrase catalytic core [Arabidopsis suecica]	[more]
RVW55286.1	0.0e+00	64.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVX08602.1	0.0e+00	64.25	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW74882.1	0.0e+00	64.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Pay0013441 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	9.0e-94	38.97	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.2e-25	35.40	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.8e-17	44.66	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	1.1e-09	39.24	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 49..181 e-value: 1.4E-12 score: 47.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..215
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 324..548 coord: 546..649 coord: 759..1153
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1125..1266 e-value: 2.64562E-56 score: 189.602
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 384..460 e-value: 3.4E-16 score: 58.9
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 789..1030 e-value: 6.6E-76 score: 255.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 548..609 e-value: 6.9E-7 score: 30.7 coord: 466..547 e-value: 4.1E-11 score: 44.5
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 231..245 score: 9.125269
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 789..1230
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 228..253
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 471..602

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013441.1	Pay0013441.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0007127	meiosis I
biological_process	GO:0019538	protein metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding