Pay0013424 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013424
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr04: 807815 .. 808412 (-)
RNA-Seq Expression	Pay0013424
Synteny	Pay0013424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGTTATTTTCCAACCCAAAAGCCAACCTTGAATTCTCTATGCATATGGAATTCACTATATTTCCAATTCATAATTCTCAATGAGTCATGTCTCCTTTCTCTCTTAATCTCTCTCAATCTCTCTCTCTCTCTTGATTATATATTCCAAGAGGAGCTCCATAGAATTACAACAAACCCTAAACACAATAATATTCATTGTTATTGAGTAAATTCTTTTTGGTTTAATGACCATGAATTGTCTTGCATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCAAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGAGGTTCCATTTTTGTTCATTAATTTCCCCCCCCCCCCC

mRNA sequence

GTTGTTATTTTCCAACCCAAAAGCCAACCTTGAATTCTCTATGCATATGGAATTCACTATATTTCCAATTCATAATTCTCAATGAGTCATGTCTCCTTTCTCTCTTAATCTCTCTCAATCTCTCTCTCTCTCTTGATTATATATTCCAAGAGGAGCTCCATAGAATTACAACAAACCCTAAACACAATAATATTCATTGTTATTGAGTAAATTCTTTTTGGTTTAATGACCATGAATTGTCTTGCATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCAAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGAGGTTCCATTTTTGTTCATTAATTTCCCCCCCCCCCCC

Coding sequence (CDS)

ATGACCATGAATTGTCTTGCATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCAAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGA

Protein sequence

MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH

Homology

[Close]

BLAST of Pay0013424 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.4e-59
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           MTMNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60

Query: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111

[Close]

BLAST of Pay0013424 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.7e-58
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

[Close]

BLAST of Pay0013424 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.7e-58
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

[Close]

BLAST of Pay0013424 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELT---PHNPIKLDED 60
           MTMNCL CQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRE-NRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDD 60

Query: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
             ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  HHISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 113

[Close]

BLAST of Pay0013424 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 81/128 (63.28%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENN----HGYETPSS--RGKSCCLYVPRRWSAELTP--HNPI 60
           M+MNCL CQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  I
Sbjct: 1   MSMNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYGHI 60

Query: 61  KLDED---------ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRD 112
           K   D          S SD   K R  R+ S +   NEPRLVRSSGMRRDWSFEDL LRD
Sbjct: 61  KTTADNAREGCSSRKSFSDKKVKDRYLRSGSMNEKENEPRLVRSSGMRRDWSFEDLRLRD 120

[Close]

BLAST of Pay0013424 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.1e-58
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           MTMNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60

Query: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111

[Close]

BLAST of Pay0013424 vs. NCBI nr
Match: XP_008465978.2 (PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncharacterized protein E5676_scaffold455G004480 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

[Close]

BLAST of Pay0013424 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-38
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELT---PHNPIKLDED 60
           MTMNCL CQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRE-NRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDD 60

Query: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
             ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  HHISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 113

[Close]

BLAST of Pay0013424 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 3.1e-37
Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELT---PHNPIKLDED-- 62
           MNCL CQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D  
Sbjct: 1   MNCLTCQALPRTQSDRE-NRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDDHH 60

Query: 63  ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  ISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 111

[Close]

BLAST of Pay0013424 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida])

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36
Identity = 89/113 (78.76%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP--HNPIKLDEDI 60
           M+MNCL CQALPRTQSDRE NHGYET SSRGKSCCLYV RRWSAELTP  +  IK D+DI
Sbjct: 1   MSMNCLTCQALPRTQSDRE-NHGYETSSSRGKSCCLYVSRRWSAELTPPSYESIKNDDDI 60

Query: 61  SSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 112
           SSS L KK ++RR  S D G NEPRLVRSSGMRRDWSFEDLGLRD QKK RFH
Sbjct: 61  SSS-LQKKAKNRRVHS-DCGRNEPRLVRSSGMRRDWSFEDLGLRD-QKKVRFH 109

[Close]

BLAST of Pay0013424 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHG------YETPSSRGKSCCL--YVPRRWSAELTPHNPI 60
           M++NCL+CQALPRT S+++ +         E  +  GK+CC+     R WS  L+P    
Sbjct: 1   MSLNCLSCQALPRTDSNKDVDLSGPGPPRVEINNVLGKTCCVNPIGGRNWSGNLSPRIYE 60

Query: 61  KLDEDISSSDLHKKPRSRRAR----SGDYGGN---------EPRLVRSSGMRRDWSFEDL 108
           K+     SS  HK  + ++      SG  G +         +P+LVRS+G+RR+WSFE+L
Sbjct: 61  KIGRP-GSSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSFENL 120

[Close]

BLAST of Pay0013424 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 8.0e-07
Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           M++NCLAC  L RT SDR+     ++      +   +               K+  + SS
Sbjct: 1   MSLNCLACHILQRTDSDRDMGSRKDSSFKENFATSAFE--------------KMVRNRSS 60

Query: 61  SDLHKKPRS--RRARSGD---YGG-NEPRLVRSSGMRRDWSFEDL 100
             + ++     RR  S D   YG  +EP+LVRSSG+RRDWSFEDL
Sbjct: 61  LPVVRRVNKGHRRLYSADIMVYGELDEPKLVRSSGIRRDWSFEDL 91

The following BLAST results are available for this feature:

BLAST of Pay0013424 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0013424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T546	5.4e-59	99.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E5T4	7.7e-58	99.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CRL3	7.7e-58	99.08	uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=...	[more]
A0A0A0LEC0	1.1e-38	76.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1	[more]
A0A6J1DZN2	1.1e-27	63.28	uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of Pay0013424 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038574.1	1.1e-58	99.10	uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]	[more]
XP_008465978.2	1.6e-57	99.08	PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncha...	[more]
KGN60385.1	2.2e-38	76.72	hypothetical protein Csa_002007 [Cucumis sativus]	[more]
XP_031737602.1	3.1e-37	76.32	uncharacterized protein LOC116402474 [Cucumis sativus]	[more]
XP_038887010.1	2.7e-36	78.76	uncharacterized protein LOC120077178 [Benincasa hispida]	[more]

BLAST of Pay0013424 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46770.1	1.2e-10	35.11	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT2G35215.1	8.0e-07	36.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..89
None	No IPR available	PANTHER	PTHR36019	PLANT/PROTEIN	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013424.1	Pay0013424.1	mRNA