Pay0013135 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013135
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Homeobox-leucine zipper protein
Location	chr11: 18369159 .. 18370073 (-)
RNA-Seq Expression	Pay0013135
Synteny	Pay0013135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGCAAAAGGGTACTCTTGTTTTGTTGAATGTATGAGTAACTCTTTACTAAGGGAGGGAGATACTTTTGTGGGTCAATTTATTCTTTGACAAAAAAGAAATGCATATTTGTTTCTGCAATTCTTTTGTAAATGAGAACAATTCCTTAAAACCTTTTGATGTGAAATGCATATTTGTTTCTGTAATTCTAAAGATTAAATGATGCTTCAAATAGATTGTTGGTTGATGATTGTTGTGTATTTGGTGTTATATTTTTGTTATGAAATGCAATGGTAGGAAAGGGAAGGTCCTGATAGTTGCACTGATATAACAGATAGCCAATTGTTGAGAAGTATTGGATCTTCCTTTGGTGCATATTTCTACTCTAGTTTAAATTGAATATGGAAGATAAATTAATTACATCTTCTCTATCAACTCATCTTAGAATTCCAATGGCCCATATCATTAGTATTTTATTGGATTTCACTTGTTTTTTTGCATACTCACAGACAGTAATGGTACTTATTCCCATTATTTGTGTTTTGGGTTAGTCAGAATCAATGGTCAACAAATTCACATGGATTGTGTCAAGAGCTATGACATTAGAAGTATTATCAACCGGCGTTGCTGGAAACTACAACGGAGAATTACAAGTAGTAATTAATTAAAATTAAATTAAATATATAATATGCCTCCCCAATCCCAAACATATATTAGTATATAGTTCTTAATAATATATATAATTTTATTATTATTGATTCAGATGACATTGAATTGCAAGTGCCTTCTCCACTAGTTCCAACTCAGAAGAGCTATTTTGGGAGGTATTGTGAACAACATGGTAAGGGAACATGGGTTGTTGTTGACGTTTCCTTAGACAATTTACGCCTAGCTTCTACTCTTAGATGTAGAAGGTCATCCGACGCTTAA

mRNA sequence

ATGGAAGGAGCAAAAGGAATCAATGGTCAACAAATTCACATGGATTGTGTCAAGAGCTATGACATTAGAAGTATTATCAACCGGCGTTGCTGGAAACTACAACGGAGAATTACAAATGACATTGAATTGCAAGTGCCTTCTCCACTAGTTCCAACTCAGAAGAGCTATTTTGGGAGGTATTGTGAACAACATGGTAAGGGAACATGGGTTGTTGTTGACGTTTCCTTAGACAATTTACGCCTAGCTTCTACTCTTAGATGTAGAAGGTCATCCGACGCTTAA

Coding sequence (CDS)

ATGGAAGGAGCAAAAGGAATCAATGGTCAACAAATTCACATGGATTGTGTCAAGAGCTATGACATTAGAAGTATTATCAACCGGCGTTGCTGGAAACTACAACGGAGAATTACAAATGACATTGAATTGCAAGTGCCTTCTCCACTAGTTCCAACTCAGAAGAGCTATTTTGGGAGGTATTGTGAACAACATGGTAAGGGAACATGGGTTGTTGTTGACGTTTCCTTAGACAATTTACGCCTAGCTTCTACTCTTAGATGTAGAAGGTCATCCGACGCTTAA

Protein sequence

MEGAKGINGQQIHMDCVKSYDIRSIINRRCWKLQRRITNDIELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRRSSDA

Homology

[Close]

BLAST of Pay0013135 vs. ExPASy Swiss-Prot
Match: Q0J9X2 (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC2 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.5e-14
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 41  IELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           +E QVPSPLVPT++SYF RYC+Q+  GTW VVDVSLD+LR +  L+CRR
Sbjct: 413 VEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRR 461

[Close]

BLAST of Pay0013135 vs. ExPASy Swiss-Prot
Match: Q94C37 (Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana OX=3702 GN=HDG2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+Q G G+W VVD+SLD+L+     RCRR
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRR 406

[Close]

BLAST of Pay0013135 vs. ExPASy Swiss-Prot
Match: Q6ZAR0 (Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 41  IELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           +E QVPSPLVPT++SYF RYC+ +  GTW VVDVSLD+LR +   +CRR
Sbjct: 412 MEFQVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSPVQKCRR 460

[Close]

BLAST of Pay0013135 vs. ExPASy Swiss-Prot
Match: Q8RWU4 (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana OX=3702 GN=ATML1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.8e-12
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+QH  G W VVDVSLD+LR +   R RR
Sbjct: 375 EFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSPITRSRR 422

[Close]

BLAST of Pay0013135 vs. ExPASy Swiss-Prot
Match: Q93V99 (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=PDF2 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLAS-TLRCRR 90
           E QVPSPLVPT+++YF RYC+QH  G+W VVDVSLD+LR ++  LR RR
Sbjct: 366 EFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPSTPILRTRR 414

[Close]

BLAST of Pay0013135 vs. ExPASy TrEMBL
Match: A0A6J1JN16 (homeobox-leucine zipper protein HDG2-like OS=Cucurbita maxima OX=3661 GN=LOC111485948 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. ExPASy TrEMBL
Match: A0A5A7T9U8 (Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold888G00400 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. ExPASy TrEMBL
Match: A0A5D3C6P4 (Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004130 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. ExPASy TrEMBL
Match: A0A6J1ERY6 (homeobox-leucine zipper protein HDG2-like OS=Cucurbita moschata OX=3662 GN=LOC111437018 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. ExPASy TrEMBL
Match: A0A1S3C111 (homeobox-leucine zipper protein HDG2 OS=Cucumis melo OX=3656 GN=LOC103495586 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. NCBI nr
Match: TYK07095.1 (homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. NCBI nr
Match: KAG7022873.1 (Homeobox-leucine zipper protein HDG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. NCBI nr
Match: XP_023530197.1 (homeobox-leucine zipper protein HDG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. NCBI nr
Match: XP_038888692.1 (homeobox-leucine zipper protein HDG2-like [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 390 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 437

[Close]

BLAST of Pay0013135 vs. NCBI nr
Match: KAA0040254.1 (homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           ELQVPSPLVPT++SYF RYC+QHG+GTW VVDVSLDNLR A  LRCRR
Sbjct: 392 ELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRR 439

[Close]

BLAST of Pay0013135 vs. TAIR 10
Match: AT1G05230.1 (homeodomain GLABROUS 2 )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+Q G G+W VVD+SLD+L+     RCRR
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRR 406

[Close]

BLAST of Pay0013135 vs. TAIR 10
Match: AT1G05230.2 (homeodomain GLABROUS 2 )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+Q G G+W VVD+SLD+L+     RCRR
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRR 406

[Close]

BLAST of Pay0013135 vs. TAIR 10
Match: AT1G05230.3 (homeodomain GLABROUS 2 )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+Q G G+W VVD+SLD+L+     RCRR
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRR 406

[Close]

BLAST of Pay0013135 vs. TAIR 10
Match: AT1G05230.4 (homeodomain GLABROUS 2 )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+Q G G+W VVD+SLD+L+     RCRR
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPARCRR 406

[Close]

BLAST of Pay0013135 vs. TAIR 10
Match: AT4G21750.1 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 42  ELQVPSPLVPTQKSYFGRYCEQHGKGTWVVVDVSLDNLRLASTLRCRR 90
           E QVPSPLVPT+++YF RYC+QH  G W VVDVSLD+LR +   R RR
Sbjct: 375 EFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSPITRSRR 422

The following BLAST results are available for this feature:

BLAST of Pay0013135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0J9X2	5.5e-14	67.35	Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q94C37	1.8e-12	62.50	Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana OX=3702 GN=HDG2 PE=...	[more]
Q6ZAR0	1.8e-12	63.27	Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q8RWU4	6.8e-12	64.58	Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q93V99	1.5e-11	65.31	Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Pay0013135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JN16	1.5e-14	81.25	homeobox-leucine zipper protein HDG2-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A5A7T9U8	1.5e-14	81.25	Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C6P4	1.5e-14	81.25	Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1ERY6	1.5e-14	81.25	homeobox-leucine zipper protein HDG2-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S3C111	1.5e-14	81.25	homeobox-leucine zipper protein HDG2 OS=Cucumis melo OX=3656 GN=LOC103495586 PE=...	[more]

BLAST of Pay0013135 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07095.1	3.1e-14	81.25	homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa]	[more]
KAG7022873.1	3.1e-14	81.25	Homeobox-leucine zipper protein HDG2, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023530197.1	3.1e-14	81.25	homeobox-leucine zipper protein HDG2-like [Cucurbita pepo subsp. pepo]	[more]
XP_038888692.1	3.1e-14	81.25	homeobox-leucine zipper protein HDG2-like [Benincasa hispida]	[more]
KAA0040254.1	3.1e-14	81.25	homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0013135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05230.1	1.3e-13	62.50	homeodomain GLABROUS 2	[more]
AT1G05230.2	1.3e-13	62.50	homeodomain GLABROUS 2	[more]
AT1G05230.3	1.3e-13	62.50	homeodomain GLABROUS 2	[more]
AT1G05230.4	1.3e-13	62.50	homeodomain GLABROUS 2	[more]
AT4G21750.1	4.8e-13	64.58	Homeobox-leucine zipper family protein / lipid-binding START domain-containing p...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002913	START domain	PFAM	PF01852	START	coord: 42..88 e-value: 4.5E-8 score: 32.8
None	No IPR available	PANTHER	PTHR45654:SF23	HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-LIKE	coord: 41..90
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 36..78
IPR042160	Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like	PANTHER	PTHR45654	HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1	coord: 41..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013135.1	Pay0013135.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0008289	lipid binding