Pay0013092 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCAAGCTCTGTCACATCGACACATGGCTTTTACTCATCCTGGACCAAAAAGGAAAACAAGAAATTTGAGGAGGCATTGGCCTTCTTTGACGAGGACACACCAGACCGTTTTGAGAAAGTAGCGAGGGCTGTTGGTGGTGGGAAAACCGCTGAGGAAGCAAGAAGGCTTTATGAGTTACTAGTACGAGATGTCAGAAAAATAGAAGCTGGTCAAGTCCAAATACCCCTTTACAAGAACGCTGGATGTAATGGCAGAGGGTATGCTGACCAGCAGAGGTAA ATGGCGTCAAGCTCTGTCACATCGACACATGGCTTTTACTCATCCTGGACCAAAAAGGAAAACAAGAAATTTGAGGAGGCATTGGCCTTCTTTGACGAGGACACACCAGACCGTTTTGAGAAAGTAGCGAGGGCTGTTGGTGGTGGGAAAACCGCTGAGGAAGCAAGAAGGCTTTATGAGTTACTAGTACGAGATGTCAGAAAAATAGAAGCTGGTCAAGTCCAAATACCCCTTTACAAGAACGCTGGATGTAATGGCAGAGGGTATGCTGACCAGCAGAGGTAA ATGGCGTCAAGCTCTGTCACATCGACACATGGCTTTTACTCATCCTGGACCAAAAAGGAAAACAAGAAATTTGAGGAGGCATTGGCCTTCTTTGACGAGGACACACCAGACCGTTTTGAGAAAGTAGCGAGGGCTGTTGGTGGTGGGAAAACCGCTGAGGAAGCAAGAAGGCTTTATGAGTTACTAGTACGAGATGTCAGAAAAATAGAAGCTGGTCAAGTCCAAATACCCCTTTACAAGAACGCTGGATGTAATGGCAGAGGGTATGCTGACCAGCAGAGGTAA MASSSVTSTHGFYSSWTKKENKKFEEALAFFDEDTPDRFEKVARAVGGGKTAEEARRLYELLVRDVRKIEAGQVQIPLYKNAGCNGRGYADQQR Homology
BLAST of Pay0013092 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-17 Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.6e-16 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-16 Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy Swiss-Prot
Match: Q1G3C4 (Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.7e-16 Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15 Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy TrEMBL
Match: A0A5A7TE80 (Protein RADIALIS-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00690 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy TrEMBL
Match: A0A0A0LGL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857080 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy TrEMBL
Match: A0A1S3CRN8 (protein RADIALIS-like 4 OS=Cucumis melo OX=3656 GN=LOC103503940 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy TrEMBL
Match: A0A6J1FCU5 (protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111442950 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.9e-39 Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Pay0013092 vs. ExPASy TrEMBL
Match: A0A6J1DP29 (protein RADIALIS-like 4 OS=Momordica charantia OX=3673 GN=LOC111022857 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.8e-35 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Pay0013092 vs. NCBI nr
Match: XP_008466554.1 (PREDICTED: protein RADIALIS-like 4 [Cucumis melo] >KAA0041600.1 protein RADIALIS-like 3 [Cucumis melo var. makuwa]) HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Pay0013092 vs. NCBI nr
Match: KGN60114.2 (hypothetical protein Csa_000871 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Pay0013092 vs. NCBI nr
Match: XP_022936283.1 (protein RADIALIS-like 3 [Cucurbita moschata] >KAG6591311.1 Protein RADIALIS-like 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024194.1 Protein RADIALIS-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38 Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Pay0013092 vs. NCBI nr
Match: XP_022155868.1 (protein RADIALIS-like 4 [Momordica charantia]) HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Pay0013092 vs. NCBI nr
Match: XP_022940511.1 (protein RADIALIS-like 3 [Cucurbita moschata]) HSP 1 Score: 151.8 bits (382), Expect = 3.0e-33 Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of Pay0013092 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 ) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Pay0013092 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 1.5e-17 Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Pay0013092 vs. TAIR 10
Match: AT2G18328.1 (RAD-like 4 ) HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17 Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of Pay0013092 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 ) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16 Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Pay0013092 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 ) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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