Pay0013062 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013062
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	nuclear transcription factor Y subunit gamma-like
Location	chr03: 25892974 .. 25893965 (+)
RNA-Seq Expression	Pay0013062
Synteny	Pay0013062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACGTAATCCCAAATCCCCAATCATACTCTACTCCATGAAGAAGGAAACAAGCGGCCCAGTTCTCCGGCCATTCCCCGCCGGCGGTCGATTTCAATCTCAATTCTCTTCTCCTGGGACTTCTCCGTTCGCTGCTTCAACGAACTTCGGCTTCTCTTCCGGATCCTCAACCTTTCTCCAAAACCACGATGATCATCATCATAACCACCATCGATCCGCTTCTCCCACTCGTGTCAACATTTCTTCCACTCCCCTGTCTCGCTCTGTTCGATTTTCCATTGGTCACCGATCCGGCTCGCCCAAACTTTCCAACCGGAACTCGCCGGTTTCTCTACCGAAAAAGCCGTGCATGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTGGCATTCACCAGCATCAGGCGTCGTCGTCGGCGTATTCATCGACCGGTTTGAACATGAGGCGGTCTGCGATGACGAACTCACTGGTGAGAATCGGTGGGGTTGAAGGAGACTGGGTTAAGCGAGCGTTGACTGCTTTGATTCGACCCTCTTCACACCAGTTGAGAAGAAGAGCCAATTTTCGGCCGCAGCCCAGCCGGCTTTCGGTCATGTCGAAGGCTGAGTGATTAGTTTGATTGATTTTCGGCGGATATAAGTGAAATCAAATCCTAGTAAATTTTGTGGATGGCGTGAATTAGATTGTACAAAGTTAGATATAAGAAATGCAATTGTGAATACACATTTCTTAAACCGAAATCAAAATCGAACTGTGCTTCGATCGATTGAATCCTATATTCCGGTAGCCTGTAGGCGTTATTTTAACATGTGGTGATTGCCGTTGGTTCTGGGTATATGCTAAACTAATTGATTTCTTCATCCATTTATTCAAACAACTATTTTGAATGAATGTTTCTAGTTTTTGTATTTTATTAATTTCGTGTGCTTTTGTAGCCAATAATAATATAATACTTGGGATCTGAC

mRNA sequence

AAAACGTAATCCCAAATCCCCAATCATACTCTACTCCATGAAGAAGGAAACAAGCGGCCCAGTTCTCCGGCCATTCCCCGCCGGCGGTCGATTTCAATCTCAATTCTCTTCTCCTGGGACTTCTCCGTTCGCTGCTTCAACGAACTTCGGCTTCTCTTCCGGATCCTCAACCTTTCTCCAAAACCACGATGATCATCATCATAACCACCATCGATCCGCTTCTCCCACTCGTGTCAACATTTCTTCCACTCCCCTGTCTCGCTCTGTTCGATTTTCCATTGGTCACCGATCCGGCTCGCCCAAACTTTCCAACCGGAACTCGCCGGTTTCTCTACCGAAAAAGCCGTGCATGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTGGCATTCACCAGCATCAGGCGTCGTCGTCGGCGTATTCATCGACCGGTTTGAACATGAGGCGGTCTGCGATGACGAACTCACTGGTGAGAATCGGTGGGGTTGAAGGAGACTGGGTTAAGCGAGCGTTGACTGCTTTGATTCGACCCTCTTCACACCAGTTGAGAAGAAGAGCCAATTTTCGGCCGCAGCCCAGCCGGCTTTCGGTCATGTCGAAGGCTGAGTGATTAGTTTGATTGATTTTCGGCGGATATAAGTGAAATCAAATCCTAGTAAATTTTGTGGATGGCGTGAATTAGATTGTACAAAGTTAGATATAAGAAATGCAATTGTGAATACACATTTCTTAAACCGAAATCAAAATCGAACTGTGCTTCGATCGATTGAATCCTATATTCCGGTAGCCTGTAGGCGTTATTTTAACATGTGGTGATTGCCGTTGGTTCTGGGTATATGCTAAACTAATTGATTTCTTCATCCATTTATTCAAACAACTATTTTGAATGAATGTTTCTAGTTTTTGTATTTTATTAATTTCGTGTGCTTTTGTAGCCAATAATAATATAATACTTGGGATCTGAC

Coding sequence (CDS)

ATGAAGAAGGAAACAAGCGGCCCAGTTCTCCGGCCATTCCCCGCCGGCGGTCGATTTCAATCTCAATTCTCTTCTCCTGGGACTTCTCCGTTCGCTGCTTCAACGAACTTCGGCTTCTCTTCCGGATCCTCAACCTTTCTCCAAAACCACGATGATCATCATCATAACCACCATCGATCCGCTTCTCCCACTCGTGTCAACATTTCTTCCACTCCCCTGTCTCGCTCTGTTCGATTTTCCATTGGTCACCGATCCGGCTCGCCCAAACTTTCCAACCGGAACTCGCCGGTTTCTCTACCGAAAAAGCCGTGCATGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTGGCATTCACCAGCATCAGGCGTCGTCGTCGGCGTATTCATCGACCGGTTTGAACATGAGGCGGTCTGCGATGACGAACTCACTGGTGAGAATCGGTGGGGTTGAAGGAGACTGGGTTAAGCGAGCGTTGACTGCTTTGATTCGACCCTCTTCACACCAGTTGAGAAGAAGAGCCAATTTTCGGCCGCAGCCCAGCCGGCTTTCGGTCATGTCGAAGGCTGAGTGA

Protein sequence

MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPQPSRLSVMSKAE

Homology

[Close]

BLAST of Pay0013062 vs. ExPASy TrEMBL
Match: A0A5A7VCJ2 (Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002280 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.2e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60
           MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60

Query: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120
           ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH
Sbjct: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180
           KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

Query: 181 RRANFRPQPSRLSVMSKAE 200
           RRANFRPQPSRLSVMSKAE
Sbjct: 181 RRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of Pay0013062 vs. ExPASy TrEMBL
Match: A0A1S3BC71 (nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC103488327 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.2e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60
           MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60

Query: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120
           ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH
Sbjct: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180
           KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

Query: 181 RRANFRPQPSRLSVMSKAE 200
           RRANFRPQPSRLSVMSKAE
Sbjct: 181 RRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of Pay0013062 vs. ExPASy TrEMBL
Match: A0A0A0LME8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 187/201 (93.03%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQN--HDDHHHNHH 60
           MKKETSGPVLRPFPAG RFQSQFSSPG S FAASTNFGFSSGSS FLQN  HDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60

Query: 61  RSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCS 120
           RS SPTRVNISSTPLS SVRFSIGHR+GSP LSNRNSPVSLPKKPC CSPTTHPGSFRCS
Sbjct: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSS+GLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAE 200
           LRRRANFRPQPSRLSVMSKA+
Sbjct: 181 LRRRANFRPQPSRLSVMSKAD 201

[Close]

BLAST of Pay0013062 vs. ExPASy TrEMBL
Match: A0A6J1BPT3 (uncharacterized protein LOC111004669 OS=Momordica charantia OX=3673 GN=LOC111004669 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.8e-71
Identity = 156/204 (76.47%), Postives = 166/204 (81.37%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQF---SSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNH 60
           MKKETSGPVLRP   G RF S     SSP +SPFAASTNFGFSSGSSTF  +H    H+H
Sbjct: 1   MKKETSGPVLRPLSPGDRFPSPISSSSSPASSPFAASTNFGFSSGSSTFFHDHRHDDHHH 60

Query: 61  HRSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRC 120
           HRSASPTRVN+SSTPLS SVRFSI HRS S +  N + P+SLPKK CMCSPTTHPGSFRC
Sbjct: 61  HRSASPTRVNLSSTPLSHSVRFSIDHRSTSKR--NGHVPISLPKKSCMCSPTTHPGSFRC 120

Query: 121 SLHK--KSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS 180
           S HK   SG G H H  +SS Y ST LNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS
Sbjct: 121 SQHKNSNSGGGGHPHHQTSS-YPSTRLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS 180

Query: 181 SHQLRRRANFRPQPSRLSVMSKAE 200
           SHQLRRRANF+P+PSRLSVMSKAE
Sbjct: 181 SHQLRRRANFQPRPSRLSVMSKAE 201

[Close]

BLAST of Pay0013062 vs. ExPASy TrEMBL
Match: A0A6J1HGM5 (uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC111462780 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 156/203 (76.85%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60
           MKKETSGPVLRP PA GRF     SP +SPFAAST+FGFSS SS+F        HN  RS
Sbjct: 1   MKKETSGPVLRPLPAAGRFH----SPISSPFAASTSFGFSSTSSSFF-------HNRERS 60

Query: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPK----LSNRNSPVSLPKKPCMCSPTTHPGSFR 120
           ASPTRVNISS PLSRSVRFSI HRSGS      LSNRNSPVS PKK C CSPTTHPGSFR
Sbjct: 61  ASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFR 120

Query: 121 CSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180
           CSLH+ SG+G H HQ     YSS+GLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS
Sbjct: 121 CSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180

Query: 181 HQLRRRANFRPQPSRLSVMSKAE 200
           HQLRRRANFRP+PSRLSV+SKA+
Sbjct: 181 HQLRRRANFRPRPSRLSVVSKAD 187

[Close]

BLAST of Pay0013062 vs. NCBI nr
Match: XP_008445241.1 (PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo] >KAA0064910.1 nuclear transcription factor Y subunit gamma-like [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60
           MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60

Query: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120
           ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH
Sbjct: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180
           KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

Query: 181 RRANFRPQPSRLSVMSKAE 200
           RRANFRPQPSRLSVMSKAE
Sbjct: 181 RRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of Pay0013062 vs. NCBI nr
Match: XP_004138717.1 (uncharacterized protein LOC101214709 [Cucumis sativus] >KGN62968.1 hypothetical protein Csa_021857 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 4.1e-96
Identity = 187/201 (93.03%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQN--HDDHHHNHH 60
           MKKETSGPVLRPFPAG RFQSQFSSPG S FAASTNFGFSSGSS FLQN  HDDHHHNHH
Sbjct: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60

Query: 61  RSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCS 120
           RS SPTRVNISSTPLS SVRFSIGHR+GSP LSNRNSPVSLPKKPC CSPTTHPGSFRCS
Sbjct: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCS 120

Query: 121 LHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQ 180
           LHKKSGSGIHQHQASSSAYSS+GLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPSSHQ
Sbjct: 121 LHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQ 180

Query: 181 LRRRANFRPQPSRLSVMSKAE 200
           LRRRANFRPQPSRLSVMSKA+
Sbjct: 181 LRRRANFRPQPSRLSVMSKAD 201

[Close]

BLAST of Pay0013062 vs. NCBI nr
Match: XP_038885670.1 (uncharacterized protein LOC120075978 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.5e-85
Identity = 177/203 (87.19%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60
           MKKETSGPVL PF AGG+F S  SSPGTSPFAASTNFGFSS SSTF QNHDD  HNH RS
Sbjct: 1   MKKETSGPVLWPFHAGGQFHSPISSPGTSPFAASTNFGFSSASSTFFQNHDD--HNHQRS 60

Query: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPK----LSNRNSPVSLPKKPCMCSPTTHPGSFR 120
           ASPTRVNISSTPLSRSVRFSI HRSGSP     LS+RNSPV LPKKPC CSPTTHPGSFR
Sbjct: 61  ASPTRVNISSTPLSRSVRFSISHRSGSPSRSITLSSRNSPVPLPKKPCACSPTTHPGSFR 120

Query: 121 CSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180
           CSLHK SGSG H HQASSSAY+S+GLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS
Sbjct: 121 CSLHKNSGSGGH-HQASSSAYASSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180

Query: 181 HQLRRRANFRPQPSRLSVMSKAE 200
           HQLRRRANFRPQ SRLSVMSKAE
Sbjct: 181 HQLRRRANFRPQRSRLSVMSKAE 200

[Close]

BLAST of Pay0013062 vs. NCBI nr
Match: XP_022131469.1 (uncharacterized protein LOC111004669 [Momordica charantia] >XP_022131470.1 uncharacterized protein LOC111004669 [Momordica charantia])

HSP 1 Score: 277.7 bits (709), Expect = 7.8e-71
Identity = 156/204 (76.47%), Postives = 166/204 (81.37%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQF---SSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNH 60
           MKKETSGPVLRP   G RF S     SSP +SPFAASTNFGFSSGSSTF  +H    H+H
Sbjct: 1   MKKETSGPVLRPLSPGDRFPSPISSSSSPASSPFAASTNFGFSSGSSTFFHDHRHDDHHH 60

Query: 61  HRSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRC 120
           HRSASPTRVN+SSTPLS SVRFSI HRS S +  N + P+SLPKK CMCSPTTHPGSFRC
Sbjct: 61  HRSASPTRVNLSSTPLSHSVRFSIDHRSTSKR--NGHVPISLPKKSCMCSPTTHPGSFRC 120

Query: 121 SLHK--KSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS 180
           S HK   SG G H H  +SS Y ST LNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS
Sbjct: 121 SQHKNSNSGGGGHPHHQTSS-YPSTRLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS 180

Query: 181 SHQLRRRANFRPQPSRLSVMSKAE 200
           SHQLRRRANF+P+PSRLSVMSKAE
Sbjct: 181 SHQLRRRANFQPRPSRLSVMSKAE 201

[Close]

BLAST of Pay0013062 vs. NCBI nr
Match: XP_023547160.1 (uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 157/203 (77.34%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60
           MKKETSGPVLRP PA GRF     SP  SPFAAST+FGFSS SS+F        HNH RS
Sbjct: 1   MKKETSGPVLRPLPAAGRFH----SPIASPFAASTSFGFSSTSSSFF-------HNHERS 60

Query: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPK----LSNRNSPVSLPKKPCMCSPTTHPGSFR 120
           ASPTRVNISS PLSRSVRFSI HRSGSP     LSNRNSPVS PKK C CSPTTHPGSFR
Sbjct: 61  ASPTRVNISSGPLSRSVRFSIDHRSGSPSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFR 120

Query: 121 CSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180
           CSLH+ SG+G H HQ     YSS+GLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS
Sbjct: 121 CSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180

Query: 181 HQLRRRANFRPQPSRLSVMSKAE 200
           HQLRRRANFRP+PSRLSV+S+A+
Sbjct: 181 HQLRRRANFRPRPSRLSVVSRAD 187

[Close]

BLAST of Pay0013062 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 194.9 bits (494), Expect = 6.2e-50
Identity = 116/214 (54.21%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 2   KKETSGPVLRPFPAGGRFQSQFS----SPGTSPFAASTNFGFSSGSSTFLQNHDDH--HH 61
           + +++GPVLR     GRF   +S    S  +S FA+ST+  FSS SS F  NH  H  +H
Sbjct: 7   RTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESNH 66

Query: 62  NHHRSASPTRVNI-SSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKP---------CM 121
           +HHRSASPTRVN+ ++ P+S+S R+S+  RS SP  +N++  VS  + P         CM
Sbjct: 67  SHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISP--TNKSISVSKNQPPSHNHKISRRCM 126

Query: 122 CSPTTHPGSFRCSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVK 181
           CSPTTHPGSFRCSLHK      + H   +++Y++ GLNMRRSAMTNSLVRIGGVEG+WV+
Sbjct: 127 CSPTTHPGSFRCSLHKNVA---NPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 186

Query: 182 RALTALIRPSSHQLRRRANFRPQPSRLSVMSKAE 200
           RALT LIRPSSH L+RRA ++P+PSRLS+M+KA+
Sbjct: 187 RALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKAD 215

[Close]

BLAST of Pay0013062 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47
Identity = 112/205 (54.63%), Postives = 144/205 (70.24%), Query Frame = 0


Query: 10  LRPFPAGGRFQSQF------SSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRSASP 69
           LR     GRF   +      SSP +S FA+ST+  FSS S+ F  +H+ ++H+ HRSASP
Sbjct: 17  LRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNNHHQHRSASP 76

Query: 70  TRVNI-SSTPLSRSVRFSIGHRSGSPKLS---NRNSPVSLPKKP-----CMCSPTTHPGS 129
           TRVN+ +S P+++S R+SI +RS SP  S   + N P +  K P     CMCSPTTHPGS
Sbjct: 77  TRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHPGS 136

Query: 130 FRCSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 189
           FRCSLHK      + H   +++Y++ GLNMRRSAMTNSLVRIGGVEG+WV+RALT LIRP
Sbjct: 137 FRCSLHKNVA---NPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRP 196

Query: 190 SSHQLRRRANFRPQPSRLSVMSKAE 200
           SSHQL+RR+ + P+ SRL+ MSKAE
Sbjct: 197 SSHQLKRRSAYEPRRSRLASMSKAE 218

[Close]

BLAST of Pay0013062 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47
Identity = 112/205 (54.63%), Postives = 144/205 (70.24%), Query Frame = 0


Query: 10  LRPFPAGGRFQSQF------SSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRSASP 69
           LR     GRF   +      SSP +S FA+ST+  FSS S+ F  +H+ ++H+ HRSASP
Sbjct: 17  LRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNNHHQHRSASP 76

Query: 70  TRVNI-SSTPLSRSVRFSIGHRSGSPKLS---NRNSPVSLPKKP-----CMCSPTTHPGS 129
           TRVN+ +S P+++S R+SI +RS SP  S   + N P +  K P     CMCSPTTHPGS
Sbjct: 77  TRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHPGS 136

Query: 130 FRCSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 189
           FRCSLHK      + H   +++Y++ GLNMRRSAMTNSLVRIGGVEG+WV+RALT LIRP
Sbjct: 137 FRCSLHKNVA---NPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRP 196

Query: 190 SSHQLRRRANFRPQPSRLSVMSKAE 200
           SSHQL+RR+ + P+ SRL+ MSKAE
Sbjct: 197 SSHQLKRRSAYEPRRSRLASMSKAE 218

[Close]

BLAST of Pay0013062 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-16
Identity = 61/158 (38.61%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 50  HDDHHHNHHRSASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPT 109
           H++HHH HHR  SP+  N +   L+  ++F        P +   +S     K+ C+CSPT
Sbjct: 22  HNNHHH-HHRQRSPSPCNKN---LNLRLKFYSPGSIPKPSVVTVSSN-HQTKRKCLCSPT 81

Query: 110 THPGSFRCSLHKKSGSGIHQHQASSSAYSST---------------GLNMRRSAMTNSLV 169
           THPGSFRCS H++      +H+ S +  SST               GLN+R+ A+ NSL 
Sbjct: 82  THPGSFRCSFHRRL-----EHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLA 141

Query: 170 RIGGVEGDWVKRALTA-LIRPSSHQLRRRANFRPQPSR 192
           +IG VE +  +R+L A L +PSS    RR  FRP+ SR
Sbjct: 142 KIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Pay0013062 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.9e-04
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0


Query: 86  GSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLHK 122
           GS  LS +    S+ K  C+CSPTTHPGSFRC +H+
Sbjct: 29  GSRGLSRQ---TSMTKTNCLCSPTTHPGSFRCRIHR 61

The following BLAST results are available for this feature:

BLAST of Pay0013062 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0013062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCJ2	5.2e-105	100.00	Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BC71	5.2e-105	100.00	nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LME8	2.0e-96	93.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1	[more]
A0A6J1BPT3	3.8e-71	76.47	uncharacterized protein LOC111004669 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1HGM5	1.6e-69	76.85	uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC1114627...	[more]

BLAST of Pay0013062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445241.1	1.1e-104	100.00	PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo] >KAA...	[more]
XP_004138717.1	4.1e-96	93.03	uncharacterized protein LOC101214709 [Cucumis sativus] >KGN62968.1 hypothetical ...	[more]
XP_038885670.1	5.5e-85	87.19	uncharacterized protein LOC120075978 [Benincasa hispida]	[more]
XP_022131469.1	7.8e-71	76.47	uncharacterized protein LOC111004669 [Momordica charantia] >XP_022131470.1 uncha...	[more]
XP_023547160.1	1.3e-70	77.34	uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0013062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	6.2e-50	54.21	serine-rich protein-related	[more]
AT5G25280.1	2.9e-47	54.63	serine-rich protein-related	[more]
AT5G25280.2	2.9e-47	54.63	serine-rich protein-related	[more]
AT5G20370.1	3.4e-16	38.61	serine-rich protein-related	[more]
AT1G67910.1	3.9e-04	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..139
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 18..199
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 18..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013062.1	Pay0013062.1	mRNA