Pay0013014 (gene) Melon (Payzawat) v1

Overview


Name	Pay0013014
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Pol protein
Location	chr09: 5305686 .. 5310236 (-)
RNA-Seq Expression	Pay0013014
Synteny	Pay0013014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGCACCAGTTACTCATGCGGACCTCGCTGCTATGGAGCAGAGGTTCAGGGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCAGCCTGCCCCGCCAGCTCCTGCTCCAGCTCCGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGCCGGATCAGTTGTCGGCAGAGGCCAAGCACTGAGGGATTTCAGGAAGTATAACCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTATCGTCTTTGGAGACCATATTTCGGTATATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACAGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGGGGTGATGTGGGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACTGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATCCAGGGTTTGGTTCGAGCTTTCCGACCCGCCACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGGTCGCAGGTAGAGGTTCGACCTCGGGACAGAAAAGGAAGGCTGAGCAGCAGCCTATTCCAGTGCCACAGCGGAACTTCAGACCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTGCCAGGGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGTTTATTTGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGGCATACAGCTGACAGATGCCCGATGAGACTTACGGGGAATGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAAAGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTGGTGACAGGTACGCTTCCAGTATTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCTGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCCTACACCATGTTCTGTCAGTATCTACTCCTTCTGGGAGTGTATGTTGTCGAAGAAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGTTAGTCCTGGACATGCTCGACTTTGATGTAATTCTAGGTATGGATTGGTTGGCCGCTAACCATGCCAGTGTAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCATCGATGACCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCATTGCCTCAGGTAATCTCAGCTATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTTGAGTATCTTAGCAAGCGTGGTGGATACTAGAGAGGTTGATGTATCCCTGTCATAAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCGCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCATACAGAATGGCCCCAGCAGAGTTGAAAGAACTGAAGGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAACTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCAGGCAGTTTTGTGATTTATAGTGATGCTTTTAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCACGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCATACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGCAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTATGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCACAGAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAAGGATCTTGAGTTTGATGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATTCCTTTGGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAAGCTACATGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA

mRNA sequence

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGCACCAAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAAGGATCTTGAGTTTGATGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATTCCTTTGGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAAGCTACATGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA

Coding sequence (CDS)

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGCACCAAGTAGGCAGAAGAGTTATGCGGATGTGAGACGGAAGGATCTTGAGTTTGATGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAATTCCTTTGGTTAAAGTCTTATGGCGGAATCACCGGGTGGAAGAAGCTACATGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA

Protein sequence

MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

Homology

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BLAST of Pay0013014 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 40   RQKSYADVRRKDL-EFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAY 99
            + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y
Sbjct: 1177 KMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNY 1236

Query: 100  RLALPPSLSTV-HDVFHVSMLRKY 122
             L LP S+  +    FHVS L KY
Sbjct: 1237 ELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0013014 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 40   RQKSYADVRRKDL-EFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAY 99
            + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y
Sbjct: 1177 KMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNY 1236

Query: 100  RLALPPSLSTV-HDVFHVSMLRKY 122
             L LP S+  +    FHVS L KY
Sbjct: 1237 ELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0013014 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 40   RQKSYADVRRKDL-EFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAY 99
            + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y
Sbjct: 1177 KMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNY 1236

Query: 100  RLALPPSLSTV-HDVFHVSMLRKY 122
             L LP S+  +    FHVS L KY
Sbjct: 1237 ELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0013014 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 40   RQKSYADVRRKDL-EFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAY 99
            + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y
Sbjct: 1177 KMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNY 1236

Query: 100  RLALPPSLSTV-HDVFHVSMLRKY 122
             L LP S+  +    FHVS L KY
Sbjct: 1237 ELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0013014 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 40   RQKSYADVRRKDL-EFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAY 99
            + K Y D++ +++ EF  GD V +K     G L   +  KL+P F GPF +L++ GP  Y
Sbjct: 1177 KMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNY 1236

Query: 100  RLALPPSLSTV-HDVFHVSMLRKY 122
             L LP S+  +    FHVS L KY
Sbjct: 1237 ELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Pay0013014 vs. ExPASy TrEMBL
Match: A0A1S4DWP6 (uncharacterized protein LOC107990886 OS=Cucumis melo OX=3656 GN=LOC107990886 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 168/195 (86.15%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFDVGDKV 60
           MP RRG  RG +GGRGRG GR    VQPVAQATD AAPSRQKSYADVRR+DLEFDVGDKV
Sbjct: 1   MPSRRGVHRGDQGGRGRGTGR----VQPVAQATDHAAPSRQKSYADVRRRDLEFDVGDKV 60

Query: 61  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 120
           FLKVAPM+GVLRFERRGKLSPRFVGPF+ILE+IG VAYRL LPPSLS VHDVFHVSMLRK
Sbjct: 61  FLKVAPMKGVLRFERRGKLSPRFVGPFDILEKIGSVAYRLVLPPSLSVVHDVFHVSMLRK 120

Query: 121 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWE 180
           YVP+PSHVVDY+PLEIDENLSYTEQPVEVLAREVKMLR +EIPLVKVLW NH+VEEATWE
Sbjct: 121 YVPNPSHVVDYDPLEIDENLSYTEQPVEVLAREVKMLRIKEIPLVKVLWWNHKVEEATWE 180

Query: 181 REDDMRSRYPELFEE 196
           REDDM++ YPELFEE
Sbjct: 181 REDDMKAHYPELFEE 191

[Close]

BLAST of Pay0013014 vs. ExPASy TrEMBL
Match: A0A5A7VIW2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold32242G00010 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37  APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
           A SRQKSYADVRRKDLEF+VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEI ERIGP+
Sbjct: 23  AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEIPERIGPI 82

Query: 97  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
           AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM
Sbjct: 83  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 142

Query: 157 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
           LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 143 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 181

[Close]

BLAST of Pay0013014 vs. ExPASy TrEMBL
Match: A0A5A7UFU0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00230 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37  APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
           A SRQKSYADVRRKDLEF+VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV
Sbjct: 4   AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 63

Query: 97  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
           AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK 
Sbjct: 64  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKT 123

Query: 157 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
           LRN+EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 124 LRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 162

[Close]

BLAST of Pay0013014 vs. ExPASy TrEMBL
Match: A0A5A7SNL9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002490 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.1e-81
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37   APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
            A SRQKSYADVRRKDL+FDVGDKVFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPV
Sbjct: 992  AQSRQKSYADVRRKDLKFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPV 1051

Query: 97   AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
            AYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEIDENLSYTEQP+EVLAREVKM
Sbjct: 1052 AYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPIEVLAREVKM 1111

Query: 157  LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
            LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 1112 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1150

[Close]

BLAST of Pay0013014 vs. ExPASy TrEMBL
Match: A0A5A7ULI8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00300 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.1e-81
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37  APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
           A SRQKSYADVRRKDLEF+VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV
Sbjct: 826 AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 885

Query: 97  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
           AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK 
Sbjct: 886 AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKT 945

Query: 157 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
           LRN+EIPLVKVLWRNHRVEEATWEREDDMRSRYP+LFEE
Sbjct: 946 LRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPDLFEE 984

[Close]

BLAST of Pay0013014 vs. NCBI nr
Match: XP_016900398.1 (PREDICTED: uncharacterized protein LOC107990886 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86
Identity = 168/195 (86.15%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFDVGDKV 60
           MP RRG  RG +GGRGRG GR    VQPVAQATD AAPSRQKSYADVRR+DLEFDVGDKV
Sbjct: 1   MPSRRGVHRGDQGGRGRGTGR----VQPVAQATDHAAPSRQKSYADVRRRDLEFDVGDKV 60

Query: 61  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 120
           FLKVAPM+GVLRFERRGKLSPRFVGPF+ILE+IG VAYRL LPPSLS VHDVFHVSMLRK
Sbjct: 61  FLKVAPMKGVLRFERRGKLSPRFVGPFDILEKIGSVAYRLVLPPSLSVVHDVFHVSMLRK 120

Query: 121 YVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWE 180
           YVP+PSHVVDY+PLEIDENLSYTEQPVEVLAREVKMLR +EIPLVKVLW NH+VEEATWE
Sbjct: 121 YVPNPSHVVDYDPLEIDENLSYTEQPVEVLAREVKMLRIKEIPLVKVLWWNHKVEEATWE 180

Query: 181 REDDMRSRYPELFEE 196
           REDDM++ YPELFEE
Sbjct: 181 REDDMKAHYPELFEE 191

[Close]

BLAST of Pay0013014 vs. NCBI nr
Match: KAA0065715.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37  APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
           A SRQKSYADVRRKDLEF+VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEI ERIGP+
Sbjct: 23  AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEIPERIGPI 82

Query: 97  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
           AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM
Sbjct: 83  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 142

Query: 157 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
           LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 143 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 181

[Close]

BLAST of Pay0013014 vs. NCBI nr
Match: KAA0053367.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 4.8e-81
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37  APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
           A SRQKSYADVRRKDLEF+VGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV
Sbjct: 4   AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 63

Query: 97  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
           AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK 
Sbjct: 64  AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKT 123

Query: 157 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
           LRN+EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 124 LRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 162

[Close]

BLAST of Pay0013014 vs. NCBI nr
Match: KAA0045595.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 37   APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
            A SRQKSYADVRR+DLEFDVGDKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILERIGPV
Sbjct: 1347 AQSRQKSYADVRRRDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPV 1406

Query: 97   AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
            AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYT QP+EVLAREVKM
Sbjct: 1407 AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTNQPIEVLAREVKM 1466

Query: 157  LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
             RNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 1467 FRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1505

[Close]

BLAST of Pay0013014 vs. NCBI nr
Match: KAA0045595.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-08
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRK 51
           MPPRRGARRGGRGGRGRGAGRVQ EVQPVAQAT PAAP      A + ++
Sbjct: 146 MPPRRGARRGGRGGRGRGAGRVQSEVQPVAQATGPAAPVTHADLATMEQR 195

HSP 2 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 37   APSRQKSYADVRRKDLEFDVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPV 96
            A SRQKSYADVRRKDL+FDVGDKVFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPV
Sbjct: 992  AQSRQKSYADVRRKDLKFDVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPV 1051

Query: 97   AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKM 156
            AYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEIDENLSYTEQP+EVLAREVKM
Sbjct: 1052 AYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPIEVLAREVKM 1111

Query: 157  LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 196
            LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Sbjct: 1112 LRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE 1150

The following BLAST results are available for this feature:

BLAST of Pay0013014 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.1e-06	39.29	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.1e-06	39.29	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.1e-06	39.29	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.1e-06	39.29	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.1e-06	39.29	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0013014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWP6	1.4e-86	86.15	uncharacterized protein LOC107990886 OS=Cucumis melo OX=3656 GN=LOC107990886 PE=...	[more]
A0A5A7VIW2	1.8e-81	97.48	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold32242G00010 ...	[more]
A0A5A7UFU0	2.3e-81	97.48	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00230 PE...	[more]
A0A5A7SNL9	5.1e-81	96.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7ULI8	5.1e-81	96.86	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00300 PE=...	[more]

BLAST of Pay0013014 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900398.1	2.9e-86	86.15	PREDICTED: uncharacterized protein LOC107990886 [Cucumis melo]	[more]
KAA0065715.1	3.6e-81	97.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053367.1	4.8e-81	97.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045595.1	1.1e-80	96.23	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0045595.1	4.1e-08	74.00	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0013014 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 36..189
None	No IPR available	PANTHER	PTHR46148:SF21	DOMAIN PROTEIN, PUTATIVE-RELATED	coord: 36..189
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 107..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0013014.1	Pay0013014.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding