Pay0012976 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012976
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription initiation factor TFIID subunit 10
Location	chr03: 25543944 .. 25547460 (-)
RNA-Seq Expression	Pay0012976
Synteny	Pay0012976

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGGCATTACCCTTCAAACGAGCTTGATTTCGAAGAGAGGGAAAAATCTAACGAAGGAGAAGACGAGGAAGAAGAAGAAGAAGAAGAAAAGGAAGAGGAAGATGAACCATAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCTATCTGAGTTTTTAGCTTCTCTAATGGAGTATACTCCCACTGTAAGATCTCTTTTCCATGCTTCTTAACCCCAATGCGCTTCTCTCCCTCCACCCATTTATCTGCAAGTTCAAGTCATGTCGCTGTTGATTTTTTTGGGGGCTATCGTTTTACAGATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGTAGGTACCTTTTTGTTTGTTTGTTTTTTTTTCTTTTTGTGTATTTTTGTTCATCAAAACCCTAGGTCTAAAACGCGGGTTTTCTACCGATAGATGAGATGGGTATAGTCTTTCTCTTAATGTTTTGAGTGGTTCTGCTTTCTTTTCGCAATTTGATCGTACTTGGAGAATTTTTCATTCAATTGGTTGGTTCTTGACTGTTGATATCGATCAAAGTGAAGCTTAACTAAATTTCTTATTTTGTATTTTTTTTCTTCTAAAGAGACAATGTTCGTCGTAGTTGCTGATTTTTTTTGTTGGAAATTGCTTAATCTCTATGAACCGAGGATGAGATTGAAGGAGCATGCTTTTTTTTTTTAAATCAAAATTTTAAATTTATTTATTTTTAATAAATAAATAAATCACAGTTCTTCTCCAACGATTCTCTACTCTTTTCTACCATTTCATTTGCTACTTTTTCCACCCGAATTTTGAAAAATGGAGAGGATATTAGTAATTTGATATGATTATCGTGGTTAAGGCAAAGTGATACTTAGTTTTTATTAGCTTTAAATGCTTTCACGATGATATGTGATGTTTGTAGTTAGATATTGGATTTCTGTTTGTTGTGAAGATCAGTTTACATTGTTCTTATAGAGCTTCATTTTTGTAGGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGTATGCTTTCTTTCTTCCCCCCCATTTTTCCTATGAAGTGCAAGTAGGATACGGTCATTACTTGGTTGGAGACCTTATAAAAAAGAGCTTGAGTTGCAGACTCTTCTTTTTAATTTCATAATTTGACTGAGTTTGAGGACAAATTTTCTGAAAACAATCCTATGCTTACAGAAGATTCCTTTTGATTGTTTTACGAGCACGACTTATAATCAACCATTTAGCTCTTTTCTCTTAAAGAAAAAAGAAAGGCCCTAATGCACAGCGGTTATTGCATGACATGGTAACTGTCTCTCACTTTAAAAGATGAGACCCTTATTCCTCCTGAGATTTCCTTCCAAAAAAGTCGTTTACAATCCTTTTCTACTTGGACCACAAGGACTAAGATATTCTTAACAAGGATAGAAAATAGATAGGGATCCCACGCCACTAAAGGCTAGGCTTCGAGAGTTTACTGCCCTTAAAAGTCTTCAGCCTGAGCATGACATTAAGATTTGCCTGGTTGTGAGCAGTAGTAAAATGGCTTGATCCAAAGTGTGCGACTCAACTCTAAGTACTTCTATTTCGACGGTCATCCCAAATTGTCTCATTGAAAGTTGCAATAGTGGTTTCCTTGGTCACATTATTCTTCATCAACGAATTGGGGTTAATCTCCTTGTCTTTTAAAGGTTAGTCAATAATCAATTTCCTTTATTGGAACCTCTTTCAGATCTGTCTTTGAAGATCTTGGAAAATGCTGATCTCCCACCCTTTGAGAACAAGACTTTCACCAATCTCCCCTAAAAGATTGGTGCTTCTAAATTTTCCATGGAAAGTATGAACCTCACAGCTGAATGTACAATTTCACTTGTCAAGATTATCAGGATTTCTAGGAGAGACTTACCGGACAGTTCTCACTGTAAATTCAATGATTAGCACACTATAACAAACAGCTATTAGAGGAACAAATCACTCTTAGTAATCCTCTACAGCTGCTCTCATGCACCTACTAAGCTTTCTTTTGTTACTGATTTGATCGTTTTTATTGAATTCACTCTCACACAACCTATTAAGGAAATTTTTGAAGAAAATATATTCTTATTCTTATTTATTCATGTTAAAATTAATATTTTTCTTGATTGCTTTCTTTAGTTGGCCTCATATTTTGTGGCCTCCGTTTTTGTTTGTTCCTTTTTTTTGTTTGCCATTTTTCTCAATGAAATTTCAATGTCTCATTAAGGAAACTTATTTTCTTGTGCAATGTAGGCATTGTAAGGCAAGGCAGGCTGCAGTGGTGAAAGACAAAAGGGATAAACAACAAAAGGTGCATTTTTTGTAACTCAAGAGTCTCTTGATTGATAAATTATTTGGCCAATCTAACATTATACTGGTTCAGGATAAGCGGTTAATATTGACCATGGAGGATCTCTCAAAGGCACTTCGTGAGGTAAGCTCGAAATGTTATTTACTTATCATAAGCTCTTGTGCTTGCTATGGTTGATTCATATGCAGATATAGAGATCATTAGTTTCATTTTGTTATGTACTCTCGTTTTTTGGGTGGTGCTAGGGGGGTTGGTTATGGGTGGGTTGTGTGAAATTATCGATGTCACTTAGGCTTTAAAGTTGATGCTGGCCGGGGGCGGGGAGTTCTTATAAGAGTGGTAATCTGTCATAAAGTATGTCTGCCTTGTTTGTGTAATAAATTCGTGTCAGGCTGTAATCTTTTATAGAATTTGTGATTTGTTTTTTTCTTCTAATTGTATGATGCACATCCTCCACACTATAATATAGTTTTCGCTCGGCAGGGAATCGTTAATGTGCATGCTTTCTCATTTTATGACCACCACTTTGGAAATGATTACGTTTTGAGCATAGACACTTGGTGATCTAGTCGCTTATCCATAACTAACCGCCTCGTTGGTACTTGATGAACAGTATGGCGTCAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGAGTTGGAATAACGGTTAAAATGTCTCATCGTTATTTATGTCGTGAATATACTGAATTACTGATGGATAGCGTTCAGGGTTGGAGTATTTCTGGCTGACTCTGCAGCTAAATTTAGTCCCTGCCATGTGCAGTCATCATGAGTCATGTTGTACATTATAGCATTGCTTTGAACATCAAAATTAAGTAGCTGTGTTTCCTTAGTCATATTCTATTACTACTTTCCATAGCAAAGGCCTTAACCTTTTCGAACTGTCAAAGCGGTAGATATGTTCGGCATTTTCTACTTGTCTATTGAATGAGACTGTGCATAATGAAAATCATAACATCATTCTTGTTCATACAAGGTCGTGTATGGATGGTTGATCCACATCTGTCAGTGACCAGAATGCATTTTCTGTAGATTTCGACTTCAATTTATTTTTATTTGTTCCTGAC

mRNA sequence

ACGGGCATTACCCTTCAAACGAGCTTGATTTCGAAGAGAGGGAAAAATCTAACGAAGGAGAAGACGAGGAAGAAGAAGAAGAAGAAGAAAAGGAAGAGGAAGATGAACCATAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCTATCTGAGTTTTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCAAGGCAGGCTGCAGTGGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGGTTAATATTGACCATGGAGGATCTCTCAAAGGCACTTCGTGAGTATGGCGTCAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGAGTTGGAATAACGGTTAAAATGTCTCATCGTTATTTATGTCGTGAATATACTGAATTACTGATGGATAGCGTTCAGGGTTGGAGTATTTCTGGCTGACTCTGCAGCTAAATTTAGTCCCTGCCATGTGCAGTCATCATGAGTCATGTTGTACATTATAGCATTGCTTTGAACATCAAAATTAAGTAGCTGTGTTTCCTTAGTCATATTCTATTACTACTTTCCATAGCAAAGGCCTTAACCTTTTCGAACTGTCAAAGCGGTAGATATGTTCGGCATTTTCTACTTGTCTATTGAATGAGACTGTGCATAATGAAAATCATAACATCATTCTTGTTCATACAAGGTCGTGTATGGATGGTTGATCCACATCTGTCAGTGACCAGAATGCATTTTCTGTAGATTTCGACTTCAATTTATTTTTATTTGTTCCTGAC

Coding sequence (CDS)

ATGAACCATAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCTATCTGAGTTTTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCAAGGCAGGCTGCAGTGGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGGTTAATATTGACCATGGAGGATCTCTCAAAGGCACTTCGTGAGTATGGCGTCAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGA

Protein sequence

MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

Homology

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BLAST of Pay0012976 vs. ExPASy Swiss-Prot
Match: O04173 (Transcription initiation factor TFIID subunit 10 OS=Arabidopsis thaliana OX=3702 GN=TAF10 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.4e-58
Identity = 114/136 (83.82%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTMEDLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTG+D  +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

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BLAST of Pay0012976 vs. ExPASy Swiss-Prot
Match: Q12962 (Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF10 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175

Query: 78  ARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYF 122
            +  A    +   + KD++  LTMEDL+ AL EYG+NVK   YF
Sbjct: 176 MKGTASGSSR--SKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

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BLAST of Pay0012976 vs. ExPASy Swiss-Prot
Match: Q8K0H5 (Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf10 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175

Query: 78  ARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYF 122
            +  A    +   + KD++  LTMEDL+ AL EYG+NVK   YF
Sbjct: 176 MKGTASGSSR--SKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

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BLAST of Pay0012976 vs. ExPASy Swiss-Prot
Match: Q9XZT7 (Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster OX=7227 GN=Taf10b PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.8e-20
Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 2   NHSQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIR 61
           +H Q + G       R    + LS+F++ L +YTP IPD +  HYL   GFQ  D R++R
Sbjct: 19  SHGQSSGGGGGGDRDRTTPSSHLSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVR 78

Query: 62  LVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVN 121
           L+++A QK+++D+  DALQH KAR            + KD++  LTMEDL  AL +YG+N
Sbjct: 79  LISLAAQKYMSDIIDDALQHSKARTHMQTTNTPGGSKAKDRKFTLTMEDLQPALADYGIN 138

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BLAST of Pay0012976 vs. ExPASy Swiss-Prot
Match: Q9U5W9 (Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7227 GN=Taf10 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-18
Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 14  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDAL 73
           +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DAL
Sbjct: 53  EESEMDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDAL 112

Query: 74  QHCKARQAAV------VKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYF 122
           QHCK R   +         K  K  KD++  L MEDL  AL ++G+ ++  +YF
Sbjct: 113 QHCKTRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQYF 166

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BLAST of Pay0012976 vs. ExPASy TrEMBL
Match: A0A1S3BD75 (Transcription initiation factor TFIID subunit 10 OS=Cucumis melo OX=3656 GN=LOC103488368 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.9e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

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BLAST of Pay0012976 vs. ExPASy TrEMBL
Match: A0A6J1KB50 (Transcription initiation factor TFIID subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111492283 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

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BLAST of Pay0012976 vs. ExPASy TrEMBL
Match: A0A6J1HHI7 (Transcription initiation factor TFIID subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111462992 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]

BLAST of Pay0012976 vs. ExPASy TrEMBL
Match: A0A0A0LPV6 (Transcription initiation factor TFIID subunit 10 OS=Cucumis sativus OX=3659 GN=Csa_2G383360 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]

BLAST of Pay0012976 vs. ExPASy TrEMBL
Match: A0A6J1BVJ5 (Transcription initiation factor TFIID subunit 10 OS=Momordica charantia OX=3673 GN=LOC111005104 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVD TSREE
Sbjct: 121 FADSPSTGVDPTSREE 136

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BLAST of Pay0012976 vs. NCBI nr
Match: XP_008445293.1 (PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

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BLAST of Pay0012976 vs. NCBI nr
Match: XP_038886703.1 (transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 20  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 79

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 80  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 139

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 140 FADSPSTGVDSTSREE 155

[Close]

BLAST of Pay0012976 vs. NCBI nr
Match: KAG6598532.1 (Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 292 MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 351

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 352 TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 411

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 412 FADSPSTGVDSTSREE 427

[Close]

BLAST of Pay0012976 vs. NCBI nr
Match: XP_022962589.1 (transcription initiation factor TFIID subunit 10 [Cucurbita moschata] >XP_022997339.1 transcription initiation factor TFIID subunit 10 [Cucurbita maxima] >XP_023547186.1 transcription initiation factor TFIID subunit 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]

BLAST of Pay0012976 vs. NCBI nr
Match: XP_004138687.1 (transcription initiation factor TFIID subunit 10 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 6.1e-67
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]

BLAST of Pay0012976 vs. TAIR 10
Match: AT4G31720.2 (TBP-associated factor II 15 )

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-59
Identity = 114/136 (83.82%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTMEDLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTG+D  +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

[Close]

BLAST of Pay0012976 vs. TAIR 10
Match: AT4G31720.1 (TBP-associated factor II 15 )

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-59
Identity = 114/136 (83.82%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTMEDLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTG+D  +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

The following BLAST results are available for this feature:

BLAST of Pay0012976 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04173	5.4e-58	83.82	Transcription initiation factor TFIID subunit 10 OS=Arabidopsis thaliana OX=3702...	[more]
Q12962	4.3e-23	50.00	Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF1...	[more]
Q8K0H5	4.3e-23	50.00	Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf...	[more]
Q9XZT7	5.8e-20	40.48	Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster OX=...	[more]
Q9U5W9	4.1e-18	39.47	Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7...	[more]

BLAST of Pay0012976 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BD75	5.9e-68	100.00	Transcription initiation factor TFIID subunit 10 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1KB50	1.3e-67	99.26	Transcription initiation factor TFIID subunit 10 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1HHI7	1.3e-67	99.26	Transcription initiation factor TFIID subunit 10 OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0LPV6	2.9e-67	98.53	Transcription initiation factor TFIID subunit 10 OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A6J1BVJ5	4.7e-65	95.59	Transcription initiation factor TFIID subunit 10 OS=Momordica charantia OX=3673 ...	[more]

BLAST of Pay0012976 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445293.1	1.2e-67	100.00	PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis ...	[more]
XP_038886703.1	1.2e-67	100.00	transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]	[more]
KAG6598532.1	2.7e-67	99.26	Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperm...	[more]
XP_022962589.1	2.7e-67	99.26	transcription initiation factor TFIID subunit 10 [Cucurbita moschata] >XP_022997...	[more]
XP_004138687.1	6.1e-67	98.53	transcription initiation factor TFIID subunit 10 [Cucumis sativus]	[more]

BLAST of Pay0012976 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31720.2	3.8e-59	83.82	TBP-associated factor II 15	[more]
AT4G31720.1	3.8e-59	83.82	TBP-associated factor II 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PRINTS	PR01443	TFIID30KDSUB	coord: 96..118 score: 56.52 coord: 50..72 score: 64.35 coord: 30..46 score: 60.0
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PFAM	PF03540	TFIID_30kDa	coord: 30..79 e-value: 1.0E-24 score: 86.2
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PIRSF	PIRSF017246	TFIID_TAF10	coord: 1..122 e-value: 5.5E-54 score: 181.2
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PANTHER	PTHR21242	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10	coord: 5..121
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	CDD	cd07982	TAF10	coord: 16..121 e-value: 1.80385E-57 score: 172.025

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012976.1	Pay0012976.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0005669	transcription factor TFIID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:1990841	promoter-specific chromatin binding
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity
molecular_function	GO:0003743	translation initiation factor activity