Pay0012871 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012871
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	heat shock factor-binding protein 1
Location	chr07: 24077687 .. 24079119 (+)
RNA-Seq Expression	Pay0012871
Synteny	Pay0012871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATAAGTAAAACATTTGCTGCTAGTGGTTTAGGTGCCATAGTTCTTGTTCCTGGTGAAGGTTGCTTTATAGGTTGGTGTTTAGAGGGGTAGATGGGGACTTAGTTTAAGATTTCCACGTGAGAAAGAATACAGATCAACTCACCTGTGTTTAGTTTGTAGATGATAGATGATATTGTTCTTGTTAACTTTAACCAGGTCCTGGATATCTTTGATGTCAATATTTGGCATAAAGGTGTCTCGAAGAAGTATTTTTTTGGAGTTGTTTGTTATGCCTTCCACGTTTGTTAGGCTTAGGTAGGCTAGGCTGGTGGAGTTTAAAGTTTCTTATTTGCTCTATGGCTATTTGGGTTTTTTTATGAATTCACAATCCTCTGTCGTTTTTTGTTTTAGCTTTGTTGTGGGAAAGGTTGAAATGATTTTGTTTTAACTTCCAATAAGTTAGCTTTGTTTTTTGTTTTAGCTTTGTTGTGGCCAAGACATCAGTTTTCAAGGTTGTTTTAATCACTATTTATTTTTGGTGTTCTACTGATTTCTGTTCCCTCAATAGTTTTACAGCTTCCCGATCTGATTGTTAAATGTAATTGTAACAAGCTTGATCTTAATTCTTTTTCAGGATTGTCACCCTCCACCTCCAGTGATTCTTAATTGTTTGACTTATTATTATTATTCGTGTTATTTGGCTGGTTTGTTTCATTGTATAAGTTTGTGAAATGCACATTTTACTTTTTCATCTTGTAGGATGGGCACAGCTCCGAAGATGCAAAACTTTATCTTCTTCAACAAATGGTGAGTTTTAGTTAGTGTAAGTTTCTGTCAGAGAAATTTATGTCTAACAAAATCTTTTTTATGCAGCAATCTAGGTTCCAAACCATGTCCGACTCCATTATCACAAAGAATATCCTTTCGAAATACTTATATTTATTTTTAGCATTTCCCTAAAGTTGTAATTATCATGAGTAATTTTTTCTGATAGGCTTGCATACATTTTGAGTTTTAAGTTCTGCAAAATAGATCATATAATTATTTATTTATTAATATAGGCTAGATTAGTGCAATTTTTTGAGTATTATCATTTTTCTTATCACTCTAGCTAACAATGATCTAGTAAAAGTTGCATATAGTTGAAACATTCTTATAGAGGAAAAATATTAATGATTTTGAAATGGATTGATTGAATACAATTTTGGGTTTGAGATACATTGAAAGAGAAGTAGATTGTAGGATAGCTTTATTGTTATAAGTTAACTTATAGTAAATAAGCTTTCTTTAACTTGAATATACGCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAATGACCTAAAGGTCGAGATGGGTGTTGAGGGCTCTCCGTCGCCACTACTTCCATCAAAGTCAGTTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTAG

mRNA sequence

ATGGGTATAAGTAAAACATTTGCTGCTAGTGGTTTAGGTGCCATAGTTCTTGTTCCTGGTGAAGGTTGCTTTATAGGTTGGTGTTTAGAGGGCTTTGTTGTGGCCAAGACATCAGTTTTCAAGGATGGGCACAGCTCCGAAGATGCAAAACTTTATCTTCTTCAACAAATGCAATCTAGGTTCCAAACCATGTCCGACTCCATTATCACAAAGAATATCCTTTCGAAATACTTATATTTATTTTTAATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAATGACCTAAAGGTCGAGATGGGTGTTGAGGGCTCTCCGTCGCCACTACTTCCATCAAAGTCAGTTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTAG

Coding sequence (CDS)

ATGGGTATAAGTAAAACATTTGCTGCTAGTGGTTTAGGTGCCATAGTTCTTGTTCCTGGTGAAGGTTGCTTTATAGGTTGGTGTTTAGAGGGCTTTGTTGTGGCCAAGACATCAGTTTTCAAGGATGGGCACAGCTCCGAAGATGCAAAACTTTATCTTCTTCAACAAATGCAATCTAGGTTCCAAACCATGTCCGACTCCATTATCACAAAGAATATCCTTTCGAAATACTTATATTTATTTTTAATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAATGACCTAAAGGTCGAGATGGGTGTTGAGGGCTCTCCGTCGCCACTACTTCCATCAAAGTCAGTTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTAG

Protein sequence

MGISKTFAASGLGAIVLVPGEGCFIGWCLEGFVVAKTSVFKDGHSSEDAKLYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELEQSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA

Homology

[Close]

BLAST of Pay0012871 vs. ExPASy Swiss-Prot
Match: Q8GW48 (Heat shock factor-binding protein OS=Arabidopsis thaliana OX=3702 GN=HSBP PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-13
Identity = 54/96 (56.25%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQ+RFQTMSDSIITK        +  MG RINELE
Sbjct: 2   DGHDSEDTKQSTADMTAFVQNLLQQMQTRFQTMSDSIITK--------IDDMGGRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDL+ EMGVEG+P P   SKS  DE K    S+
Sbjct: 62  QSINDLRAEMGVEGTPPP--ASKS-GDEPKTPASSS 86

[Close]

BLAST of Pay0012871 vs. ExPASy TrEMBL
Match: A0A1S3BSN9 (heat shock factor-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103492833 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 70/96 (72.92%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SEDAK            LLQQMQSRFQTMSDSIITK        +  MGSRINELE
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMQSRFQTMSDSIITK--------IDEMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDLK EMGVEGSPSPL PSKSVADEVKKDEGSA
Sbjct: 62  QSINDLKAEMGVEGSPSPLPPSKSVADEVKKDEGSA 89

[Close]

BLAST of Pay0012871 vs. ExPASy TrEMBL
Match: A0A498IQB5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_027234 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21
Identity = 66/96 (68.75%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSI+TKNI      LF MGSRINELE
Sbjct: 414 DGHDSEDPKQSTADMSAFVQNLLQQMQSRFQTMSDSIVTKNI------LFSMGSRINELE 473

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
            SINDLK EMG+EGSPSP+  SK VADEVK+DEGSA
Sbjct: 474 SSINDLKTEMGMEGSPSPMQQSKPVADEVKQDEGSA 503

[Close]

BLAST of Pay0012871 vs. ExPASy TrEMBL
Match: A0A6J1JVW1 (heat shock factor-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488351 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21
Identity = 67/96 (69.79%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSIITK        +  MGSRINELE
Sbjct: 2   DGHDSEDTKQSTADMTVFVQNLLQQMQSRFQTMSDSIITK--------IDEMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDLK EMGVEGSPSP+ PSKS ADEVKKDEGSA
Sbjct: 62  QSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEGSA 89

[Close]

BLAST of Pay0012871 vs. ExPASy TrEMBL
Match: A0A540K707 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_044461 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.0e-21
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSI+TKNI      LF MGSRINELE
Sbjct: 2   DGHDSEDPKQSTADMSAFVQNLLQQMQSRFQTMSDSIVTKNI------LFSMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
            SINDLK EMG+EGSPSP+  SK  ADEVK+DEGSA
Sbjct: 62  SSINDLKTEMGMEGSPSPMQQSKPAADEVKQDEGSA 91

[Close]

BLAST of Pay0012871 vs. ExPASy TrEMBL
Match: A0A6J1GMG8 (heat shock factor-binding protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455787 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21
Identity = 67/96 (69.79%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSIITK        +  MGSRINELE
Sbjct: 2   DGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITK--------IDEMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDLK EMGVEGSPSP+ PSKS ADEVKKDEGSA
Sbjct: 62  QSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEGSA 89

[Close]

BLAST of Pay0012871 vs. NCBI nr
Match: XP_008451602.1 (PREDICTED: heat shock factor-binding protein 1 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-22
Identity = 70/96 (72.92%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SEDAK            LLQQMQSRFQTMSDSIITK        +  MGSRINELE
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMQSRFQTMSDSIITK--------IDEMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDLK EMGVEGSPSPL PSKSVADEVKKDEGSA
Sbjct: 62  QSINDLKAEMGVEGSPSPLPPSKSVADEVKKDEGSA 89

[Close]

BLAST of Pay0012871 vs. NCBI nr
Match: XP_004136040.1 (heat shock factor-binding protein isoform X2 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 9.5e-22
Identity = 69/96 (71.88%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SEDAK            LLQQMQSRFQTMSDSIITK        +  MGSRINELE
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMQSRFQTMSDSIITK--------IDEMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDLK EMGVEGSPSPL PSK VADEVKKDEGSA
Sbjct: 62  QSINDLKAEMGVEGSPSPLPPSKPVADEVKKDEGSA 89

[Close]

BLAST of Pay0012871 vs. NCBI nr
Match: RXH84335.1 (hypothetical protein DVH24_027234 [Malus domestica])

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-21
Identity = 66/96 (68.75%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSI+TKNI      LF MGSRINELE
Sbjct: 414 DGHDSEDPKQSTADMSAFVQNLLQQMQSRFQTMSDSIVTKNI------LFSMGSRINELE 473

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
            SINDLK EMG+EGSPSP+  SK VADEVK+DEGSA
Sbjct: 474 SSINDLKTEMGMEGSPSPMQQSKPVADEVKQDEGSA 503

[Close]

BLAST of Pay0012871 vs. NCBI nr
Match: XP_022991819.1 (heat shock factor-binding protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-21
Identity = 67/96 (69.79%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSIITK        +  MGSRINELE
Sbjct: 2   DGHDSEDTKQSTADMTVFVQNLLQQMQSRFQTMSDSIITK--------IDEMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDLK EMGVEGSPSP+ PSKS ADEVKKDEGSA
Sbjct: 62  QSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEGSA 89

[Close]

BLAST of Pay0012871 vs. NCBI nr
Match: TQD70006.1 (hypothetical protein C1H46_044461 [Malus baccata])

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-21
Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQSRFQTMSDSI+TKNI      LF MGSRINELE
Sbjct: 2   DGHDSEDPKQSTADMSAFVQNLLQQMQSRFQTMSDSIVTKNI------LFSMGSRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
            SINDLK EMG+EGSPSP+  SK  ADEVK+DEGSA
Sbjct: 62  SSINDLKTEMGMEGSPSPMQQSKPAADEVKQDEGSA 91

[Close]

BLAST of Pay0012871 vs. TAIR 10
Match: AT4G15802.1 (heat shock factor binding protein )

HSP 1 Score: 77.4 bits (189), Expect = 9.2e-15
Identity = 54/96 (56.25%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 42  DGHSSEDAK----------LYLLQQMQSRFQTMSDSIITKNILSKYLYLFLMGSRINELE 101
           DGH SED K            LLQQMQ+RFQTMSDSIITK        +  MG RINELE
Sbjct: 2   DGHDSEDTKQSTADMTAFVQNLLQQMQTRFQTMSDSIITK--------IDDMGGRINELE 61

Query: 102 QSINDLKVEMGVEGSPSPLLPSKSVADEVKKDEGSA 128
           QSINDL+ EMGVEG+P P   SKS  DE K    S+
Sbjct: 62  QSINDLRAEMGVEGTPPP--ASKS-GDEPKTPASSS 86

The following BLAST results are available for this feature:

BLAST of Pay0012871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW48	1.3e-13	56.25	Heat shock factor-binding protein OS=Arabidopsis thaliana OX=3702 GN=HSBP PE=1 S...	[more]

BLAST of Pay0012871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSN9	1.2e-22	72.92	heat shock factor-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103492833 PE=3...	[more]
A0A498IQB5	1.0e-21	68.75	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_027234 PE=3 SV=1	[more]
A0A6J1JVW1	3.0e-21	69.79	heat shock factor-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A540K707	3.0e-21	67.71	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_044461 PE=3 SV=1	[more]
A0A6J1GMG8	3.9e-21	69.79	heat shock factor-binding protein 1-like isoform X2 OS=Cucurbita moschata OX=366...	[more]

BLAST of Pay0012871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451602.1	2.5e-22	72.92	PREDICTED: heat shock factor-binding protein 1 [Cucumis melo]	[more]
XP_004136040.1	9.5e-22	71.88	heat shock factor-binding protein isoform X2 [Cucumis sativus]	[more]
RXH84335.1	2.1e-21	68.75	hypothetical protein DVH24_027234 [Malus domestica]	[more]
XP_022991819.1	6.1e-21	69.79	heat shock factor-binding protein 1-like isoform X2 [Cucurbita maxima]	[more]
TQD70006.1	6.1e-21	67.71	hypothetical protein C1H46_044461 [Malus baccata]	[more]

BLAST of Pay0012871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15802.1	9.2e-15	56.25	heat shock factor binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009643	Heat shock factor binding 1	PFAM	PF06825	HSBP1	coord: 53..99 e-value: 8.9E-10 score: 38.3
IPR009643	Heat shock factor binding 1	PANTHER	PTHR19424	HEAT SHOCK FACTOR BINDING PROTEIN 1	coord: 53..122
None	No IPR available	GENE3D	1.20.5.430		coord: 52..94 e-value: 1.6E-14 score: 55.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..127
None	No IPR available	PANTHER	PTHR19424:SF8	HEAT SHOCK FACTOR-BINDING PROTEIN 1-LIKE	coord: 53..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012871.1	Pay0012871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070370	cellular heat acclimation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity