Pay0012748 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012748
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Peroxiredoxins prx-1 prx-2 prx-3
Location	chr05: 3049466 .. 3049714 (-)
RNA-Seq Expression	Pay0012748
Synteny	Pay0012748

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCGATGGCAGCCTTGGTGTTTCGGTTTCCACATCTCCTAAACATGCAAACAGAGATGCTGAGACCATGAGGTCGAGTTCGCCAAAAGGCCAGTGTTTGTGCTCGCCCACGATGCATCAAGGCTCCTTTAGATGTCGGCTTCATCGTTCGACATCATCGGCATGGATGAAACGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCTCCCAAAGGATCTCTTGGGTCTTCTTGA

mRNA sequence

ATGGCCTCCGATGGCAGCCTTGGTGTTTCGGTTTCCACATCTCCTAAACATGCAAACAGAGATGCTGAGACCATGAGGTCGAGTTCGCCAAAAGGCCAGTGTTTGTGCTCGCCCACGATGCATCAAGGCTCCTTTAGATGTCGGCTTCATCGTTCGACATCATCGGCATGGATGAAACGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCTCCCAAAGGATCTCTTGGGTCTTCTTGA

Coding sequence (CDS)

ATGGCCTCCGATGGCAGCCTTGGTGTTTCGGTTTCCACATCTCCTAAACATGCAAACAGAGATGCTGAGACCATGAGGTCGAGTTCGCCAAAAGGCCAGTGTTTGTGCTCGCCCACGATGCATCAAGGCTCCTTTAGATGTCGGCTTCATCGTTCGACATCATCGGCATGGATGAAACGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCTCCCAAAGGATCTCTTGGGTCTTCTTGA

Protein sequence

MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPVASLSPKGSLGSS

Homology

[Close]

BLAST of Pay0012748 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKGSLGSS 83
          SKSMPANNPVASLSPKGSLGSS
Sbjct: 61 SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of Pay0012748 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.7e-36
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MASDGSLGVSVS+SPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKGSLGSS 83
          SKSMPANNPVASLSPKGSLGSS
Sbjct: 61 SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of Pay0012748 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MASDGSL VSVSTSPKHANRDAET+RS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKGSLGSS 83
          SKSMP NNPVASLSPK SL SS
Sbjct: 61 SKSMPTNNPVASLSPKESLESS 82

[Close]

BLAST of Pay0012748 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
           MASDGSL V VSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKR
Sbjct: 43  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 102

Query: 61  SKSMPANNPVASLSPKGSLGSS 83
           SKSMPA++PVASLS K SLGSS
Sbjct: 103 SKSMPADHPVASLSSKESLGSS 124

[Close]

BLAST of Pay0012748 vs. ExPASy TrEMBL
Match: A0A061GNT6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.9e-18
Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS G+  ++VSTSPK +N +A    +S   GQCLCSPT HQGSFRCR HRS+SSAWMKR
Sbjct: 1  MASHGN--ITVSTSPKGSNSEAAVPTNSPKGGQCLCSPTTHQGSFRCRFHRSSSSAWMKR 60

Query: 61 SKSMPANNPVASLSPK 77
          SKSMPAN  +ASLSPK
Sbjct: 61 SKSMPANGSLASLSPK 74

[Close]

BLAST of Pay0012748 vs. NCBI nr
Match: KAA0061558.1 (hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 161.4 bits (407), Expect = 3.3e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKGSLGSS 83
          SKSMPANNPVASLSPKGSLGSS
Sbjct: 61 SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of Pay0012748 vs. NCBI nr
Match: TYK10714.1 (hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 9.7e-36
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MASDGSLGVSVS+SPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKGSLGSS 83
          SKSMPANNPVASLSPKGSLGSS
Sbjct: 61 SKSMPANNPVASLSPKGSLGSS 82

[Close]

BLAST of Pay0012748 vs. NCBI nr
Match: KGN60621.1 (hypothetical protein Csa_019426 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 2.2e-32
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MASDGSL VSVSTSPKHANRDAET+RS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKGSLGSS 83
          SKSMP NNPVASLSPK SL SS
Sbjct: 61 SKSMPTNNPVASLSPKESLESS 82

[Close]

BLAST of Pay0012748 vs. NCBI nr
Match: KAG6586427.1 (hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 5.5e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
           MAS+GSL V VS SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 60  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 119

Query: 61  SKSMPANNPVASLSPKGSLGSS 83
           SKSMPAN PVASLSPK +LGSS
Sbjct: 120 SKSMPANKPVASLSPKETLGSS 141

[Close]

BLAST of Pay0012748 vs. NCBI nr
Match: KAG7021282.1 (hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 5.5e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
           MAS+GSL V VS SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 27  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 86

Query: 61  SKSMPANNPVASLSPKGSLGSS 83
           SKSMPAN PVASLSPK +LGSS
Sbjct: 87  SKSMPANKPVASLSPKETLGSS 108

[Close]

BLAST of Pay0012748 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN 68
          +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Sbjct: 57 KSSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

[Close]

BLAST of Pay0012748 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.5e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 67
          ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36 QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of Pay0012748 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.2 bits (108), Expect = 1.5e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 67
          ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36 QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]

BLAST of Pay0012748 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 2.8e-04
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN 68
          ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Sbjct: 24 QTSITKTICICSPTTHPGSFKCKLHRTPS---LQRNKSVETN 62

[Close]

BLAST of Pay0012748 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 41.6 bits (96), Expect = 3.6e-04
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 31  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPVAS 73
           K  C+C+PT H+GSFRCRLHRS++++    +  +    P+ S
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSATSHGAATAELHLPKPLLS 103

The following BLAST results are available for this feature:

BLAST of Pay0012748 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1X5	1.6e-36	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CHP3	4.7e-36	98.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LKU3	1.1e-32	92.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1	[more]
A0A6J1G498	1.7e-30	89.02	uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A061GNT6	9.9e-18	68.42	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1	[more]

BLAST of Pay0012748 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061558.1	3.3e-36	100.00	hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa]	[more]
TYK10714.1	9.7e-36	98.78	hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa]	[more]
KGN60621.1	2.2e-32	92.68	hypothetical protein Csa_019426 [Cucumis sativus]	[more]
KAG6586427.1	5.5e-31	90.24	hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021282.1	5.5e-31	90.24	hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Pay0012748 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13227.1	1.7e-06	52.38	serine-rich protein-related	[more]
AT1G67910.1	1.5e-05	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	1.5e-05	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G24577.1	2.8e-04	47.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G56500.1	3.6e-04	42.86	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..82
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..75
None	No IPR available	PANTHER	PTHR33132:SF37	SERINE-RICH PROTEIN-LIKE PROTEIN	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012748.1	Pay0012748.1	mRNA