Pay0012726 (gene) Melon (Payzawat) v1

Overview
NamePay0012726
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr01: 35923951 .. 35924399 (+)
RNA-Seq ExpressionPay0012726
SyntenyPay0012726
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATATAATTATGGCTCTGCAGCAAAGGTGTGGCAATAATAATCTTGGTCTTGTTGCTGTTTTCATAGTTCTAATGGTGGTTTCTTCCCCTGATCTCATGCTAATTACTACCTCCCATGCAGCTCGTTTGGCCAAAATAGGTGAGCAAAATTTTTGTATAAAATGAATTTATAAACAATATATAAGATTGAAAATAAATGGATATATAATATAATGGTTTGGTTTTGGTATGGGCAGATCCCCCAATGTGTCCTCAATGCATGTGTTGTAGTTCTCCACCACCAGGCTTTTGCTGTGATTGTTGCTCCAATTCTCAGTTGCCACCATGAATATAATTCATTCTCGTTACATATGTAACGTAAGACGTAATATTGTTAAATCTTTCATAATCCATTGTATATTGGATTAATTAAGCTTTATATACATATATATATATATATATATATAT

mRNA sequence

GAAATATAATTATGGCTCTGCAGCAAAGGTGTGGCAATAATAATCTTGGTCTTGTTGCTGTTTTCATAGTTCTAATGGTGGTTTCTTCCCCTGATCTCATGCTAATTACTACCTCCCATGCAGCTCGTTTGGCCAAAATAGATCCCCCAATGTGTCCTCAATGCATGTGTTGTAGTTCTCCACCACCAGGCTTTTGCTGTGATTGTTGCTCCAATTCTCAGTTGCCACCATGAATATAATTCATTCTCGTTACATATGTAACGTAAGACGTAATATTGTTAAATCTTTCATAATCCATTGTATATTGGATTAATTAAGCTTTATATACATATATATATATATATATATATAT

Coding sequence (CDS)

ATGGCTCTGCAGCAAAGGTGTGGCAATAATAATCTTGGTCTTGTTGCTGTTTTCATAGTTCTAATGGTGGTTTCTTCCCCTGATCTCATGCTAATTACTACCTCCCATGCAGCTCGTTTGGCCAAAATAGATCCCCCAATGTGTCCTCAATGCATGTGTTGTAGTTCTCCACCACCAGGCTTTTGCTGTGATTGTTGCTCCAATTCTCAGTTGCCACCATGA

Protein sequence

MALQQRCGNNNLGLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPGFCCDCCSNSQLPP
Homology
BLAST of Pay0012726 vs. ExPASy TrEMBL
Match: A0A5D3BXX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00520 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MALQQRCGNNNLGLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPG 60
          MALQQRCGNNN+GLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPG
Sbjct: 1  MALQQRCGNNNIGLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPG 60

Query: 61 FCCDCCSNSQLPP 74
          FCCDCCSNSQLPP
Sbjct: 61 FCCDCCSNSQLPP 73

BLAST of Pay0012726 vs. ExPASy TrEMBL
Match: A0A0A0K9Q7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452240 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 69/74 (93.24%), Postives = 70/74 (94.59%), Query Frame = 0

Query: 1  MALQQRCGNNNLGLVAVFIVLMVVSS-PDLMLITTSHAARLAKIDPPMCPQCMCCSSPPP 60
          MAL QRCG NN+G VAVFIVLMVVSS PDLMLITTSHAARLAKIDPPMCPQCMCCSSPPP
Sbjct: 1  MAL-QRCG-NNVGFVAVFIVLMVVSSAPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPP 60

Query: 61 GFCCDCCSNSQLPP 74
          GFCCDCCSNSQLPP
Sbjct: 61 GFCCDCCSNSQLPP 72

BLAST of Pay0012726 vs. ExPASy TrEMBL
Match: B9RQ96 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1486940 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 14 LVAVFIVLMVVSSPDLMLITTSHAARLAK--------IDPPMCPQCMCCSSPPPGFCCDC 73
          LV +FI+LMV+     +++  ++AAR A+         + PMCPQC CCS+PPPG CC C
Sbjct: 10 LVTIFIILMVLP----LMVPPANAARFAQQGIIEVSLKEEPMCPQCTCCSAPPPGSCCKC 69

BLAST of Pay0012726 vs. ExPASy TrEMBL
Match: B9RQA1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1486990 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.4e-04
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0

Query: 17 VFIVLMVVSSPDLMLITTSHAARLAK--------IDPPMCPQCMCCSSPPPGFCCDCCSN 73
          +FIV+MV+     +++  ++AAR  +         + PMCPQC CCSSPPPG CC CC+ 
Sbjct: 13 IFIVVMVLP----LVVPPANAARFTRQGIIEVSLKEDPMCPQCACCSSPPPGSCCKCCTT 72

BLAST of Pay0012726 vs. NCBI nr
Match: KAA0059465.1 (hypothetical protein E6C27_scaffold242G001950 [Cucumis melo var. makuwa] >TYK03858.1 hypothetical protein E5676_scaffold347G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MALQQRCGNNNLGLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPG 60
          MALQQRCGNNN+GLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPG
Sbjct: 1  MALQQRCGNNNIGLVAVFIVLMVVSSPDLMLITTSHAARLAKIDPPMCPQCMCCSSPPPG 60

Query: 61 FCCDCCSNSQLPP 74
          FCCDCCSNSQLPP
Sbjct: 61 FCCDCCSNSQLPP 73

BLAST of Pay0012726 vs. NCBI nr
Match: EEF46335.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-05
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 14 LVAVFIVLMVVSSPDLMLITTSHAARLAK--------IDPPMCPQCMCCSSPPPGFCCDC 73
          LV +FI+LMV+     +++  ++AAR A+         + PMCPQC CCS+PPPG CC C
Sbjct: 10 LVTIFIILMVLP----LMVPPANAARFAQQGIIEVSLKEEPMCPQCTCCSAPPPGSCCKC 69

BLAST of Pay0012726 vs. NCBI nr
Match: KAF3450660.1 (hypothetical protein FNV43_RR06749 [Rhamnella rubrinervis])

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 14 LVAVFIVLMVVSSPDLMLITTSHAARLAKID-PPMCPQCMCCSSPPPGFCCDCCSN 69
          LV +FI  MV+SS     ++TS  AR   +D  P+CP C+CCS+PPPG CCDCC++
Sbjct: 12 LVTLFIFAMVLSS-----LSTSDGARFFYLDATPICPACVCCSTPPPGSCCDCCAS 62

BLAST of Pay0012726 vs. NCBI nr
Match: KAF3450659.1 (hypothetical protein FNV43_RR06748 [Rhamnella rubrinervis])

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 14 LVAVFIVLMVVSSPDLMLITTSHAARLAKID-PPMCPQCMCCSSPPPGFCCDCCSN 69
          LV +FI  MV+SS     ++TS  AR   +D  P+CP C+CCS+PPPG CCDCC++
Sbjct: 12 LVTLFIFAMVLSSS----LSTSDGARFFYLDATPICPACVCCSTPPPGSCCDCCAS 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BXX81.5e-3398.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K9Q72.1e-2793.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452240 PE=4 SV=1[more]
B9RQ961.3e-0546.27Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1486940 PE=4 SV=1[more]
B9RQA19.4e-0443.75Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1486990 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0059465.13.1e-3398.63hypothetical protein E6C27_scaffold242G001950 [Cucumis melo var. makuwa] >TYK038... [more]
EEF46335.12.7e-0546.27conserved hypothetical protein [Ricinus communis][more]
KAF3450660.11.8e-0451.79hypothetical protein FNV43_RR06749 [Rhamnella rubrinervis][more]
KAF3450659.11.8e-0451.79hypothetical protein FNV43_RR06748 [Rhamnella rubrinervis][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0012726.1Pay0012726.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane