Pay0012678 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012678
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr10: 7819213 .. 7820145 (+)
RNA-Seq Expression	Pay0012678
Synteny	Pay0012678

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAACGAGATGTCAGAGGATTTTAGAGTCACCCTCGATGTCATTAGGAATGAAATCACAGACGTGAACGCGAGGCTGAATCTAACGATGCGAGCAATGGCAAACCAAGCTCTAACTGGAGGAGCAATTTCGGTTAGCAGAGTAAAGATCCCGGAACCAAAGCCCTTCTGTGGGGCAAGAGATGCAAAGGCTTTAAAGAATTATATCTTCGACCTTGAACAGTACTTCAAGGCTACAAACACCGTCACCGAGGAAGCTAAAGTGACATTGGCAACGATGCATCTGTTTGAAGATGCCAAGTTGTGGTGGAGGTCTCGATACGTGGACATATAGGAAGGGCGTTGCACAATAGATACTTGAGACGCCCTGAAGAGAGAACTCCGTTCGTAATTCTTCCCCGAGAATGTGGAAATCCTTGCTCGACAAAAGTTGCGCGATTTAAGACACACTGGCGAGATTTAGGAGTACGTGAAACAGTTCGCGAGATTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTATTCTGTTTCGTCGAAGGGCTGAAACCGTGGGCAAGGGCCAAGTTGTATGAACAAAGGGTTCAAGACCTCACGTCAGCTTATGCAGCAGCCGAACGGTTGTTTGATCTGACAAGTGACTCTGAAGATGTGAGACGTCACCAAAGTTCCTCACCTAGAAGGAATAGGAATAGTCGTCCGAGTTCTTCCAAAGCTATTGGGGGAGACGAATGTCCTGGTAAAGACCGCAGATCTCACCAGTCAAACACAGAGAACACATGGCGAAGGCCGAATAGCCGAAGCCCACCCAAGCGTCCCCTCAGTTGTTTCATATGTGGGAAGCCACATCTGGCAAGAGAATGCCCGAATAAAGTCGACTTCCATGCATTTCAGACCTCATTAATCGCGGATTCAGACGATAAGTGA

mRNA sequence

ATGATAAACGAGATGTCAGAGGATTTTAGAGTCACCCTCGATGTCATTAGGAATGAAATCACAGACGTGAACGCGAGGCTGAATCTAACGATGCGAGCAATGGCAAACCAAGCTCTAACTGGAGGAGCAATTTCGGTTAGCAGAGTAAAGATCCCGGAACCAAAGCCCTTCTGTGGGGCAAGAGATGCAAAGGCTTTAAAGAATTATATCTTCGACCTTGAACAGTACTTCAAGGCTACAAACACCGTCACCGAGGAAGCTAAAGTGACATTGGCAACGATGCATCTGTTTGAAGATGCCAAGTTGTGGTGGAGGTCTCGATACGAGTACGTGAAACAGTTCGCGAGATTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTATTCTGTTTCGTCGAAGGGCTGAAACCGTGGGCAAGGGCCAAGTTGTATGAACAAAGGGTTCAAGACCTCACGTCAGCTTATGCAGCAGCCGAACGGTTGTTTGATCTGACAAGTGACTCTGAAGATGTGAGACGTCACCAAAGTTCCTCACCTAGAAGGAATAGGAATAGTCGTCCGAGTTCTTCCAAAGCTATTGGGGGAGACGAATGTCCTGGTAAAGACCGCAGATCTCACCAGTCAAACACAGAGAACACATGGCGAAGGCCGAATAGCCGAAGCCCACCCAAGCGTCCCCTCAGTTGTTTCATATGTGGGAAGCCACATCTGGCAAGAGAATGCCCGAATAAAGTCGACTTCCATGCATTTCAGACCTCATTAATCGCGGATTCAGACGATAAGTGA

Coding sequence (CDS)

ATGATAAACGAGATGTCAGAGGATTTTAGAGTCACCCTCGATGTCATTAGGAATGAAATCACAGACGTGAACGCGAGGCTGAATCTAACGATGCGAGCAATGGCAAACCAAGCTCTAACTGGAGGAGCAATTTCGGTTAGCAGAGTAAAGATCCCGGAACCAAAGCCCTTCTGTGGGGCAAGAGATGCAAAGGCTTTAAAGAATTATATCTTCGACCTTGAACAGTACTTCAAGGCTACAAACACCGTCACCGAGGAAGCTAAAGTGACATTGGCAACGATGCATCTGTTTGAAGATGCCAAGTTGTGGTGGAGGTCTCGATACGAGTACGTGAAACAGTTCGCGAGATTGATGTTAGACATTCGCGATATGTCAGAGAAAGACAAAGTATTCTGTTTCGTCGAAGGGCTGAAACCGTGGGCAAGGGCCAAGTTGTATGAACAAAGGGTTCAAGACCTCACGTCAGCTTATGCAGCAGCCGAACGGTTGTTTGATCTGACAAGTGACTCTGAAGATGTGAGACGTCACCAAAGTTCCTCACCTAGAAGGAATAGGAATAGTCGTCCGAGTTCTTCCAAAGCTATTGGGGGAGACGAATGTCCTGGTAAAGACCGCAGATCTCACCAGTCAAACACAGAGAACACATGGCGAAGGCCGAATAGCCGAAGCCCACCCAAGCGTCCCCTCAGTTGTTTCATATGTGGGAAGCCACATCTGGCAAGAGAATGCCCGAATAAAGTCGACTTCCATGCATTTCAGACCTCATTAATCGCGGATTCAGACGATAAGTGA

Protein sequence

MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGARDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRYEYVKQFARLMLDIRDMSEKDKVFCFVEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSKAIGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQTSLIADSDDK

Homology

[Close]

BLAST of Pay0012678 vs. ExPASy TrEMBL
Match: A0A5A7V4W1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00200 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.0e-124
Identity = 238/310 (76.77%), Postives = 249/310 (80.32%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN+MSEDFRVTLDVIRNEI D+N RLNLTMRAMANQA  GGAISVS+VKIPEPKPFCGA
Sbjct: 289 MINDMSEDFRVTLDVIRNEIADMNTRLNLTMRAMANQAPAGGAISVSKVKIPEPKPFCGA 348

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRY------------ 120
           RDAKAL+NYIF LEQYFKATNTVTEEAKVTLATMHL +DAKLWWRSRY            
Sbjct: 349 RDAKALENYIFYLEQYFKATNTVTEEAKVTLATMHLSKDAKLWWRSRYVDIQEGRCTIDT 408

Query: 121 -----------------------------------EYVKQFARLMLDIRDMSEKDKVFCF 180
                                              EYVKQFA LMLDIRDMSEKDKVFCF
Sbjct: 409 WDTLKRELRSQFFPKNVEILARQKLHDLRHTGKIREYVKQFAGLMLDIRDMSEKDKVFCF 468

Query: 181 VEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSK 240
           VEGLKPWARAKLYEQRVQ+LTSAYAAAERLFDL SDS+D+ RHQSSS RRNRNSRPSS K
Sbjct: 469 VEGLKPWARAKLYEQRVQNLTSAYAAAERLFDLASDSQDMSRHQSSSLRRNRNSRPSSPK 528

Query: 241 AIGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQ 264
           A+GGDECP KDRRSHQSN+ENTWRRPN+RSPPKRPLSCFICGKPHLARECPNKVDFHA Q
Sbjct: 529 AVGGDECPSKDRRSHQSNSENTWRRPNNRSPPKRPLSCFICGKPHLARECPNKVDFHAIQ 588

[Close]

BLAST of Pay0012678 vs. ExPASy TrEMBL
Match: A0A5D3BUS1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00720 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 237/309 (76.70%), Postives = 246/309 (79.61%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNEI DVNARLNLTMRAMANQA  GGAISVSRVKIPEPKPFCGA
Sbjct: 113 MINGMSEDFRVTLDVVRNEIADVNARLNLTMRAMANQAPAGGAISVSRVKIPEPKPFCGA 172

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRY------------ 120
           RD KAL+NYIFDLEQYFKATNTVTEEAKVTLATMHL EDAKLWWRSRY            
Sbjct: 173 RDVKALENYIFDLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDT 232

Query: 121 ----------------------------------EYVKQFARLMLDIRDMSEKDKVFCFV 180
                                             EYVKQFA LMLDIRDMSEKDKVFCFV
Sbjct: 233 WDALKRELRSQFFPENVEILARRKLRDLHTGKIWEYVKQFAGLMLDIRDMSEKDKVFCFV 292

Query: 181 EGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSKA 240
           EGLKPWAR KLYEQRVQDLTSAYAA E LFDLT DS+DVRRHQSSSPRRNRNSRPSS KA
Sbjct: 293 EGLKPWARVKLYEQRVQDLTSAYAAVEWLFDLTRDSQDVRRHQSSSPRRNRNSRPSSPKA 352

Query: 241 IGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQT 264
           +GGDECPGKDRRSHQSNT NTW+RPN++ PPKR LSCFICG+PH+AREC NKVDFHAFQ 
Sbjct: 353 VGGDECPGKDRRSHQSNTRNTWQRPNNQRPPKRRLSCFICGRPHIARECLNKVDFHAFQA 412

[Close]

BLAST of Pay0012678 vs. ExPASy TrEMBL
Match: A0A5D3CYE8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00880 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121
Identity = 229/280 (81.79%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNEI DVNARLNLTMRAMANQA   GAISVSRVKI +PKPFCGA
Sbjct: 1   MINYMSEDFRVTLDVVRNEIVDVNARLNLTMRAMANQAQARGAISVSRVKILKPKPFCGA 60

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWR--------------- 120
           RDAKAL+NYIF LEQYFKATNTVTEEAKVTLATMHL EDAKLWWR               
Sbjct: 61  RDAKALENYIFYLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRECGNPCSTKIADLNH 120

Query: 121 --SRYEYVKQFARLMLDIRDMSEKDKVFCFVEGLKPWARAKLYEQRVQDLTSAYAAAERL 180
                EYVKQFA LMLDIRDM EKDKVFCFVEGLKPWA+AKLYEQRVQDLTSAYA AERL
Sbjct: 121 TGKIREYVKQFAGLMLDIRDMLEKDKVFCFVEGLKPWAKAKLYEQRVQDLTSAYAVAERL 180

Query: 181 FDLTSDSEDVRRHQSSSPRRNRNSRPSSSKAIGGDECPGKDRRSHQSNTENTWRRPNSRS 240
           FDLTSDS+DVRRHQSSSP RN+NSRPSS KA+GGDECP KDRR HQSNTENTWR PN+RS
Sbjct: 181 FDLTSDSQDVRRHQSSSPGRNKNSRPSSPKAVGGDECPSKDRRPHQSNTENTWRWPNNRS 240

Query: 241 PPKRPLSCFICGKPHLARECPNKVDFHAFQTSLIADSDDK 264
            PKRPLSCFICG+PH  RECPNK+DFHAFQ SLIADSD K
Sbjct: 241 SPKRPLSCFICGRPHRERECPNKIDFHAFQASLIADSDGK 280

[Close]

BLAST of Pay0012678 vs. ExPASy TrEMBL
Match: A0A5A7V816 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00450 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121
Identity = 229/280 (81.79%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNEI DVNARLNLTMRAMANQA   GAISVSRVKI +PKPFCGA
Sbjct: 1   MINYMSEDFRVTLDVVRNEIVDVNARLNLTMRAMANQAQARGAISVSRVKILKPKPFCGA 60

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWR--------------- 120
           RDAKAL+NYIF LEQYFKATNTVTEEAKVTLATMHL EDAKLWWR               
Sbjct: 61  RDAKALENYIFYLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRECGNPCSTKIADLNH 120

Query: 121 --SRYEYVKQFARLMLDIRDMSEKDKVFCFVEGLKPWARAKLYEQRVQDLTSAYAAAERL 180
                EYVKQFA LMLDIRDM EKDKVFCFVEGLKPWA+AKLYEQRVQDLTSAYA AERL
Sbjct: 121 TGKIREYVKQFAGLMLDIRDMLEKDKVFCFVEGLKPWAKAKLYEQRVQDLTSAYAVAERL 180

Query: 181 FDLTSDSEDVRRHQSSSPRRNRNSRPSSSKAIGGDECPGKDRRSHQSNTENTWRRPNSRS 240
           FDLTSDS+DVRRHQSSSP RN+NSRPSS KA+GGDECP KDRR HQSNTENTWR PN+RS
Sbjct: 181 FDLTSDSQDVRRHQSSSPGRNKNSRPSSPKAVGGDECPSKDRRPHQSNTENTWRWPNNRS 240

Query: 241 PPKRPLSCFICGKPHLARECPNKVDFHAFQTSLIADSDDK 264
            PKRPLSCFICG+PH  RECPNK+DFHAFQ SLIADSD K
Sbjct: 241 SPKRPLSCFICGRPHRERECPNKIDFHAFQASLIADSDGK 280

[Close]

BLAST of Pay0012678 vs. ExPASy TrEMBL
Match: A0A5A7U674 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001460 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121
Identity = 231/310 (74.52%), Postives = 247/310 (79.68%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNE+ +VNARLNLTMRA+ANQA  GGAISVSRVKIPEPKPFCGA
Sbjct: 66  MINGMSEDFRVTLDVVRNEVAEVNARLNLTMRAIANQAPAGGAISVSRVKIPEPKPFCGA 125

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRY------------ 120
           RDAKAL+NYIFDLEQYFKATNTVTEEAKVTLAT+HL EDAKLWWRSRY            
Sbjct: 126 RDAKALENYIFDLEQYFKATNTVTEEAKVTLATIHLSEDAKLWWRSRYVDIQEGRCTIDT 185

Query: 121 -----------------------------------EYVKQFARLMLDIRDMSEKDKVFCF 180
                                              EYVKQFA LMLDIRDMSEKDKVFCF
Sbjct: 186 WDALKRELRSQFFPKNVEILARRKLRDLRHTGEIREYVKQFAGLMLDIRDMSEKDKVFCF 245

Query: 181 VEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSK 240
           +EGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSD++DVRRH+SSSP RNRNSRPSS K
Sbjct: 246 IEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDTQDVRRHKSSSPGRNRNSRPSSPK 305

Query: 241 AIGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQ 264
            +  DE  GKDRRSHQSNTENTW+RPN++SPPKR LSC+ICGKPH+ RECPNKVDFHAFQ
Sbjct: 306 TVRRDEYTGKDRRSHQSNTENTWQRPNNQSPPKRRLSCYICGKPHMTRECPNKVDFHAFQ 365

[Close]

BLAST of Pay0012678 vs. NCBI nr
Match: KAA0060801.1 (uncharacterized protein E6C27_scaffold137G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 456.1 bits (1172), Expect = 2.1e-124
Identity = 238/310 (76.77%), Postives = 249/310 (80.32%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN+MSEDFRVTLDVIRNEI D+N RLNLTMRAMANQA  GGAISVS+VKIPEPKPFCGA
Sbjct: 289 MINDMSEDFRVTLDVIRNEIADMNTRLNLTMRAMANQAPAGGAISVSKVKIPEPKPFCGA 348

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRY------------ 120
           RDAKAL+NYIF LEQYFKATNTVTEEAKVTLATMHL +DAKLWWRSRY            
Sbjct: 349 RDAKALENYIFYLEQYFKATNTVTEEAKVTLATMHLSKDAKLWWRSRYVDIQEGRCTIDT 408

Query: 121 -----------------------------------EYVKQFARLMLDIRDMSEKDKVFCF 180
                                              EYVKQFA LMLDIRDMSEKDKVFCF
Sbjct: 409 WDTLKRELRSQFFPKNVEILARQKLHDLRHTGKIREYVKQFAGLMLDIRDMSEKDKVFCF 468

Query: 181 VEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSK 240
           VEGLKPWARAKLYEQRVQ+LTSAYAAAERLFDL SDS+D+ RHQSSS RRNRNSRPSS K
Sbjct: 469 VEGLKPWARAKLYEQRVQNLTSAYAAAERLFDLASDSQDMSRHQSSSLRRNRNSRPSSPK 528

Query: 241 AIGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQ 264
           A+GGDECP KDRRSHQSN+ENTWRRPN+RSPPKRPLSCFICGKPHLARECPNKVDFHA Q
Sbjct: 529 AVGGDECPSKDRRSHQSNSENTWRRPNNRSPPKRPLSCFICGKPHLARECPNKVDFHAIQ 588

[Close]

BLAST of Pay0012678 vs. NCBI nr
Match: TYK01829.1 (uncharacterized protein E5676_scaffold113G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 4.7e-124
Identity = 237/309 (76.70%), Postives = 246/309 (79.61%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNEI DVNARLNLTMRAMANQA  GGAISVSRVKIPEPKPFCGA
Sbjct: 113 MINGMSEDFRVTLDVVRNEIADVNARLNLTMRAMANQAPAGGAISVSRVKIPEPKPFCGA 172

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRY------------ 120
           RD KAL+NYIFDLEQYFKATNTVTEEAKVTLATMHL EDAKLWWRSRY            
Sbjct: 173 RDVKALENYIFDLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRSRYVDIQEGRCTVDT 232

Query: 121 ----------------------------------EYVKQFARLMLDIRDMSEKDKVFCFV 180
                                             EYVKQFA LMLDIRDMSEKDKVFCFV
Sbjct: 233 WDALKRELRSQFFPENVEILARRKLRDLHTGKIWEYVKQFAGLMLDIRDMSEKDKVFCFV 292

Query: 181 EGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSKA 240
           EGLKPWAR KLYEQRVQDLTSAYAA E LFDLT DS+DVRRHQSSSPRRNRNSRPSS KA
Sbjct: 293 EGLKPWARVKLYEQRVQDLTSAYAAVEWLFDLTRDSQDVRRHQSSSPRRNRNSRPSSPKA 352

Query: 241 IGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQT 264
           +GGDECPGKDRRSHQSNT NTW+RPN++ PPKR LSCFICG+PH+AREC NKVDFHAFQ 
Sbjct: 353 VGGDECPGKDRRSHQSNTRNTWQRPNNQRPPKRRLSCFICGRPHIARECLNKVDFHAFQA 412

[Close]

BLAST of Pay0012678 vs. NCBI nr
Match: TYK15436.1 (uncharacterized protein E5676_scaffold571G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 444.5 bits (1142), Expect = 6.3e-121
Identity = 229/280 (81.79%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNEI DVNARLNLTMRAMANQA   GAISVSRVKI +PKPFCGA
Sbjct: 1   MINYMSEDFRVTLDVVRNEIVDVNARLNLTMRAMANQAQARGAISVSRVKILKPKPFCGA 60

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWR--------------- 120
           RDAKAL+NYIF LEQYFKATNTVTEEAKVTLATMHL EDAKLWWR               
Sbjct: 61  RDAKALENYIFYLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRECGNPCSTKIADLNH 120

Query: 121 --SRYEYVKQFARLMLDIRDMSEKDKVFCFVEGLKPWARAKLYEQRVQDLTSAYAAAERL 180
                EYVKQFA LMLDIRDM EKDKVFCFVEGLKPWA+AKLYEQRVQDLTSAYA AERL
Sbjct: 121 TGKIREYVKQFAGLMLDIRDMLEKDKVFCFVEGLKPWAKAKLYEQRVQDLTSAYAVAERL 180

Query: 181 FDLTSDSEDVRRHQSSSPRRNRNSRPSSSKAIGGDECPGKDRRSHQSNTENTWRRPNSRS 240
           FDLTSDS+DVRRHQSSSP RN+NSRPSS KA+GGDECP KDRR HQSNTENTWR PN+RS
Sbjct: 181 FDLTSDSQDVRRHQSSSPGRNKNSRPSSPKAVGGDECPSKDRRPHQSNTENTWRWPNNRS 240

Query: 241 PPKRPLSCFICGKPHLARECPNKVDFHAFQTSLIADSDDK 264
            PKRPLSCFICG+PH  RECPNK+DFHAFQ SLIADSD K
Sbjct: 241 SPKRPLSCFICGRPHRERECPNKIDFHAFQASLIADSDGK 280

[Close]

BLAST of Pay0012678 vs. NCBI nr
Match: KAA0061819.1 (uncharacterized protein E6C27_scaffold89G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 444.5 bits (1142), Expect = 6.3e-121
Identity = 229/280 (81.79%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNEI DVNARLNLTMRAMANQA   GAISVSRVKI +PKPFCGA
Sbjct: 1   MINYMSEDFRVTLDVVRNEIVDVNARLNLTMRAMANQAQARGAISVSRVKILKPKPFCGA 60

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWR--------------- 120
           RDAKAL+NYIF LEQYFKATNTVTEEAKVTLATMHL EDAKLWWR               
Sbjct: 61  RDAKALENYIFYLEQYFKATNTVTEEAKVTLATMHLSEDAKLWWRECGNPCSTKIADLNH 120

Query: 121 --SRYEYVKQFARLMLDIRDMSEKDKVFCFVEGLKPWARAKLYEQRVQDLTSAYAAAERL 180
                EYVKQFA LMLDIRDM EKDKVFCFVEGLKPWA+AKLYEQRVQDLTSAYA AERL
Sbjct: 121 TGKIREYVKQFAGLMLDIRDMLEKDKVFCFVEGLKPWAKAKLYEQRVQDLTSAYAVAERL 180

Query: 181 FDLTSDSEDVRRHQSSSPRRNRNSRPSSSKAIGGDECPGKDRRSHQSNTENTWRRPNSRS 240
           FDLTSDS+DVRRHQSSSP RN+NSRPSS KA+GGDECP KDRR HQSNTENTWR PN+RS
Sbjct: 181 FDLTSDSQDVRRHQSSSPGRNKNSRPSSPKAVGGDECPSKDRRPHQSNTENTWRWPNNRS 240

Query: 241 PPKRPLSCFICGKPHLARECPNKVDFHAFQTSLIADSDDK 264
            PKRPLSCFICG+PH  RECPNK+DFHAFQ SLIADSD K
Sbjct: 241 SPKRPLSCFICGRPHRERECPNKIDFHAFQASLIADSDGK 280

[Close]

BLAST of Pay0012678 vs. NCBI nr
Match: KAA0051403.1 (uncharacterized protein E6C27_scaffold55G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 444.5 bits (1142), Expect = 6.3e-121
Identity = 231/310 (74.52%), Postives = 247/310 (79.68%), Query Frame = 0


Query: 1   MINEMSEDFRVTLDVIRNEITDVNARLNLTMRAMANQALTGGAISVSRVKIPEPKPFCGA 60
           MIN MSEDFRVTLDV+RNE+ +VNARLNLTMRA+ANQA  GGAISVSRVKIPEPKPFCGA
Sbjct: 66  MINGMSEDFRVTLDVVRNEVAEVNARLNLTMRAIANQAPAGGAISVSRVKIPEPKPFCGA 125

Query: 61  RDAKALKNYIFDLEQYFKATNTVTEEAKVTLATMHLFEDAKLWWRSRY------------ 120
           RDAKAL+NYIFDLEQYFKATNTVTEEAKVTLAT+HL EDAKLWWRSRY            
Sbjct: 126 RDAKALENYIFDLEQYFKATNTVTEEAKVTLATIHLSEDAKLWWRSRYVDIQEGRCTIDT 185

Query: 121 -----------------------------------EYVKQFARLMLDIRDMSEKDKVFCF 180
                                              EYVKQFA LMLDIRDMSEKDKVFCF
Sbjct: 186 WDALKRELRSQFFPKNVEILARRKLRDLRHTGEIREYVKQFAGLMLDIRDMSEKDKVFCF 245

Query: 181 VEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDSEDVRRHQSSSPRRNRNSRPSSSK 240
           +EGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSD++DVRRH+SSSP RNRNSRPSS K
Sbjct: 246 IEGLKPWARAKLYEQRVQDLTSAYAAAERLFDLTSDTQDVRRHKSSSPGRNRNSRPSSPK 305

Query: 241 AIGGDECPGKDRRSHQSNTENTWRRPNSRSPPKRPLSCFICGKPHLARECPNKVDFHAFQ 264
            +  DE  GKDRRSHQSNTENTW+RPN++SPPKR LSC+ICGKPH+ RECPNKVDFHAFQ
Sbjct: 306 TVRRDEYTGKDRRSHQSNTENTWQRPNNQSPPKRRLSCYICGKPHMTRECPNKVDFHAFQ 365

The following BLAST results are available for this feature:

BLAST of Pay0012678 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012678 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4W1	1.0e-124	76.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BUS1	2.3e-124	76.70	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CYE8	3.1e-121	81.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V816	3.1e-121	81.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U674	3.1e-121	74.52	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Pay0012678 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060801.1	2.1e-124	76.77	uncharacterized protein E6C27_scaffold137G00200 [Cucumis melo var. makuwa]	[more]
TYK01829.1	4.7e-124	76.70	uncharacterized protein E5676_scaffold113G00720 [Cucumis melo var. makuwa]	[more]
TYK15436.1	6.3e-121	81.79	uncharacterized protein E5676_scaffold571G00880 [Cucumis melo var. makuwa]	[more]
KAA0061819.1	6.3e-121	81.79	uncharacterized protein E6C27_scaffold89G00450 [Cucumis melo var. makuwa]	[more]
KAA0051403.1	6.3e-121	74.52	uncharacterized protein E6C27_scaffold55G001460 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0012678 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012678.1	Pay0012678.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding