Pay0012580 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012580
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr11: 6058214 .. 6058936 (-)
RNA-Seq Expression	Pay0012580
Synteny	Pay0012580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTTCTCTTGATCTTTATACAATTGTACCACCATTTAATGATCCATCACTTTATCGTAGATTAGTTGGTTCCTTGCAATATCTTACGTTCACTCGTCCTGATATTGCATTCTCCGTAAATCATGTTAGTCAGTTCATGCATAAACCAATTGTCATTCACTTTTCAGCCGTCAAATGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAACAAAATTTTGAAAAGGTTTGTTTTCTCTACAAACCTTTTGTGATTCTAATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCCTTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAAAAGCAGAATATCATTCCCTTGCCACTACTACTGCCGATCTTTACTGGATCCGACAACTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGACAATGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATTGAAATTGATTATCACTTTGTTCGGGAAAAAGTTTTTCACAAGGACATCTCCATCTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAATGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA

mRNA sequence

ATGTCTACTTCTCTTGATCTTTATACAATTGTACCACCATTTAATGATCCATCACTTTATCGTAGATTAGTTGGTTCCTTGCAATATCTTACGTTCACTCGTCCTGATATTGCATTCTCCGTAAATCATGTTAGTTTGTTTTCTCTACAAACCTTTTGTGATTCTAATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCCTTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAAAAGCAGAATATCATTCCCTTGCCACTACTACTGCCGATCTTTACTGGATCCGACAACTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGACAATGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATTGAAATTGATTATCACTTTGTTCGGGAAAAAGTTTTTCACAAGGACATCTCCATCTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAATGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA

Coding sequence (CDS)

ATGTCTACTTCTCTTGATCTTTATACAATTGTACCACCATTTAATGATCCATCACTTTATCGTAGATTAGTTGGTTCCTTGCAATATCTTACGTTCACTCGTCCTGATATTGCATTCTCCGTAAATCATGTTAGTTTGTTTTCTCTACAAACCTTTTGTGATTCTAATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCCTTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAAAAGCAGAATATCATTCCCTTGCCACTACTACTGCCGATCTTTACTGGATCCGACAACTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGACAATGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATTGAAATTGATTATCACTTTGTTCGGGAAAAAGTTTTTCACAAGGACATCTCCATCTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAATGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA

Protein sequence

MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV

Homology

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BLAST of Pay0012580 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.3e-44
Identity = 99/232 (42.67%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 2    STSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLF-------------- 61
            S  L LY+      DP+ YR +VGSLQYL FTRPDI+++VN +S F              
Sbjct: 1228 SPKLSLYS-GTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKR 1287

Query: 62   ---------------------SLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQ 121
                                 SL  + D++WAGD  D  ST+G+I +LG +PISWSSKKQ
Sbjct: 1288 ILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQ 1347

Query: 122  STVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 181
              V RSST+AEY S+A T++++ WI  LL +L + L   P ++CDNV A  L  NPVFH+
Sbjct: 1348 KGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHS 1407

Query: 182  RTKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKL 199
            R KHI IDYHF+R +V    + + ++S+++QLAD LT PL    F +   K+
Sbjct: 1408 RMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKI 1458

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BLAST of Pay0012580 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.7e-44
Identity = 94/218 (43.12%), Postives = 131/218 (60.09%), Query Frame = 0


Query: 16   DPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLF---------------------------- 75
            DP+ YR +VGSLQYL FTRPD++++VN +S +                            
Sbjct: 1224 DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIF 1283

Query: 76   -------SLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHS 135
                   SL  + D++WAGDT D  ST+G+I +LG +PISWSSKKQ  V RSST+AEY S
Sbjct: 1284 LKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1343

Query: 136  LATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRE 195
            +A T+++L WI  LL +L + L   P ++CDNV A  L  NPVFH+R KHI +DYHF+R 
Sbjct: 1344 VANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1403

Query: 196  KVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKL 199
            +V    + + ++S+++QLAD LT PL    F +   K+
Sbjct: 1404 QVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKI 1441

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BLAST of Pay0012580 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29
Identity = 77/208 (37.02%), Postives = 123/208 (59.13%), Query Frame = 0


Query: 1    MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFT-RPDIAFSVNHVSLFSLQTFCDSNWAG 60
            ++T++++ +     N+  L++ L   L+YL  T    + F  N      +  + DS+WAG
Sbjct: 1199 LTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAG 1258

Query: 61   DTSDRRSTSGFI-AFLGSNPISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLLCDL 120
               DR+ST+G++      N I W++K+Q++V+ SST+AEY +L     +  W++ LL  +
Sbjct: 1259 SEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSI 1318

Query: 121  HVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICYISSNNQL 180
            ++ L+    ++ DN   IS+A+NP  H R KHI+I YHF RE+V +  I + YI + NQL
Sbjct: 1319 NIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQL 1378

Query: 181  ADILTMPLLSPTFLHLRDKL-LTQPESS 206
            ADI T PL +  F+ LRDKL L Q + S
Sbjct: 1379 ADIFTKPLPAARFVELRDKLGLLQDDQS 1406

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BLAST of Pay0012580 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23
Identity = 61/132 (46.21%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 14  FNDPSLYRRLVGSLQYLTFTRPDIAFSVNHV----------------------------- 73
           + DPS +R +VG+LQYLT TRPDI+++VN V                             
Sbjct: 94  YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHG 153

Query: 74  ------SLFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEY 111
                 S  ++Q FCDS+WAG TS RRST+GF  FLG N ISWS+K+Q TVSRSST+ EY
Sbjct: 154 LYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEY 213

[Close]

BLAST of Pay0012580 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 67/199 (33.67%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 20   YRRLVGSLQY-LTFTRPDIAFSVNHVSLF------------------------------- 79
            Y   VGSL Y +  TRPDIA +V  VS F                               
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1170

Query: 80   ---SLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHSLATT 139
                L+ + D++ AGD  +R+S++G++       ISW SK Q  V+ S+T+AEY +   T
Sbjct: 1171 SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATET 1230

Query: 140  TADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFH 184
              ++ W+++ L +L +  K    ++CD+ SAI L+ N ++HARTKHI++ YH++RE V  
Sbjct: 1231 GKEMIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDD 1290

[Close]

BLAST of Pay0012580 vs. ExPASy TrEMBL
Match: A0A5D3CH60 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00480 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99
Identity = 191/215 (88.84%), Postives = 195/215 (90.70%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLFSLQTF-------- 60
           MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVS F  +          
Sbjct: 332 MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSQFMHKPIVIHFSAVK 391

Query: 61  CDSNW-AGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHSLATTTADLYWI 120
           C   +  GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSST+AEY  L+TTTADLYWI
Sbjct: 392 CILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRFLSTTTADLYWI 451

Query: 121 RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY 180
           RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY
Sbjct: 452 RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY 511

Query: 181 ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV
Sbjct: 512 ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 546

[Close]

BLAST of Pay0012580 vs. ExPASy TrEMBL
Match: A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 191/240 (79.58%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVS--------------- 60
           MSTSLDLYTI PPFNDP LYRRLVGSLQYLTFTRPDIA SVN VS               
Sbjct: 417 MSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVSQFMHKPTVIHFSAVK 476

Query: 61  -------------------LFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQ 120
                               FSLQTFCDS+WA DTSDRRSTSGFIAFLGSNPISWSSKKQ
Sbjct: 477 RILRYLCGTPTLGIKFRKGSFSLQTFCDSDWAADTSDRRSTSGFIAFLGSNPISWSSKKQ 536

Query: 121 STVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 180
           S VSRSST+AEY SLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA
Sbjct: 537 SIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 596

Query: 181 RTKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           RTKHIEIDYHFV EKV  KDISICYI SNNQLADILT PLLSPTFLHLRDKLLTQPESSV
Sbjct: 597 RTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV 656

[Close]

BLAST of Pay0012580 vs. ExPASy TrEMBL
Match: A0A5A7TWG2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold199G00090 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 186/238 (78.15%), Postives = 190/238 (79.83%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHV---------------- 60
           MSTSLDLYTI PPFNDPSLYRRLVGSLQYLTFT P+IAFSVN V                
Sbjct: 187 MSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTHPNIAFSVNRVSSCINQLLFTFQPSNA 246

Query: 61  -----------------SLFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQS 120
                            S FSLQTFCDS+W  DTSDRRSTSGFIAFLGSNPISW SKKQS
Sbjct: 247 SSDISVILQPFGIKFRKSSFSLQTFCDSDWTCDTSDRRSTSGFIAFLGSNPISWYSKKQS 306

Query: 121 TVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHAR 180
           TVSRSST+AEY SLATTTADLYWIRQLLCDLHVPLKT+PTLWCDNV AISL HNPVFHAR
Sbjct: 307 TVSRSSTEAEYRSLATTTADLYWIRQLLCDLHVPLKTTPTLWCDNVFAISLVHNPVFHAR 366

Query: 181 TKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESS 206
           TKHIEIDYHFVREKVF KDISI YISSNNQL DILT PLLSPTFLHL DKLLTQPESS
Sbjct: 367 TKHIEIDYHFVREKVFRKDISIRYISSNNQLVDILTKPLLSPTFLHLGDKLLTQPESS 424

[Close]

BLAST of Pay0012580 vs. ExPASy TrEMBL
Match: A0A1S4DYI8 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991158 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.6e-94
Identity = 186/240 (77.50%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVS--------------- 60
           MSTSLDLYTI PPFNDPSLY RL+GSLQYLTFT PDIAF VN  S               
Sbjct: 1   MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVK 60

Query: 61  -------------------LFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQ 120
                              LFSLQTFCD +WAGDTSDRRSTS FIAFLGSNPISWSSKKQ
Sbjct: 61  RILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNPISWSSKKQ 120

Query: 121 STVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 180
           STVSRSST+AEY SLATTT DLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA
Sbjct: 121 STVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 180

Query: 181 RTKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           RTKHIEIDYHFVR+KV  KDISI YI SNNQLADILT PLLSPTFLHLRDKLLTQ ESSV
Sbjct: 181 RTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV 240

[Close]

BLAST of Pay0012580 vs. ExPASy TrEMBL
Match: A0A5D3DAS3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00830 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.5e-91
Identity = 182/215 (84.65%), Postives = 183/215 (85.12%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLFSLQTFCDSNWA-- 60
           MSTSLDLYTI PPFNDPSLY RLV SLQYLTFTRPDIAFSVN VS F  +       A  
Sbjct: 11  MSTSLDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVK 70

Query: 61  -------GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHSLATTTADLYWI 120
                  GDTSDRRSTSGFIAFLGSN ISWSSKKQSTVSRSSTKAEYHSLA TTADLYWI
Sbjct: 71  RILKYLHGDTSDRRSTSGFIAFLGSNLISWSSKKQSTVSRSSTKAEYHSLAITTADLYWI 130

Query: 121 RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY 180
           RQLLCDLHVPLKTSPTLWCDNVS I LAHN VFHARTKHIEIDYHFVREKV  KDISI Y
Sbjct: 131 RQLLCDLHVPLKTSPTLWCDNVSTIPLAHNSVFHARTKHIEIDYHFVREKVLRKDISIRY 190

Query: 181 ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           ISSNNQLADILT PLLSPTFLHLRDKLLTQPESSV
Sbjct: 191 ISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV 225

[Close]

BLAST of Pay0012580 vs. NCBI nr
Match: TYK11141.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 5.3e-99
Identity = 191/215 (88.84%), Postives = 195/215 (90.70%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLFSLQTF-------- 60
           MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVS F  +          
Sbjct: 332 MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSQFMHKPIVIHFSAVK 391

Query: 61  CDSNW-AGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHSLATTTADLYWI 120
           C   +  GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSST+AEY  L+TTTADLYWI
Sbjct: 392 CILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRFLSTTTADLYWI 451

Query: 121 RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY 180
           RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY
Sbjct: 452 RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY 511

Query: 181 ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV
Sbjct: 512 ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 546

[Close]

BLAST of Pay0012580 vs. NCBI nr
Match: KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 362.5 bits (929), Expect = 2.5e-96
Identity = 191/240 (79.58%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVS--------------- 60
           MSTSLDLYTI PPFNDP LYRRLVGSLQYLTFTRPDIA SVN VS               
Sbjct: 417 MSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVSQFMHKPTVIHFSAVK 476

Query: 61  -------------------LFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQ 120
                               FSLQTFCDS+WA DTSDRRSTSGFIAFLGSNPISWSSKKQ
Sbjct: 477 RILRYLCGTPTLGIKFRKGSFSLQTFCDSDWAADTSDRRSTSGFIAFLGSNPISWSSKKQ 536

Query: 121 STVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 180
           S VSRSST+AEY SLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA
Sbjct: 537 SIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 596

Query: 181 RTKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           RTKHIEIDYHFV EKV  KDISICYI SNNQLADILT PLLSPTFLHLRDKLLTQPESSV
Sbjct: 597 RTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV 656

[Close]

BLAST of Pay0012580 vs. NCBI nr
Match: KAA0047933.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 186/238 (78.15%), Postives = 190/238 (79.83%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHV---------------- 60
           MSTSLDLYTI PPFNDPSLYRRLVGSLQYLTFT P+IAFSVN V                
Sbjct: 187 MSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTHPNIAFSVNRVSSCINQLLFTFQPSNA 246

Query: 61  -----------------SLFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQS 120
                            S FSLQTFCDS+W  DTSDRRSTSGFIAFLGSNPISW SKKQS
Sbjct: 247 SSDISVILQPFGIKFRKSSFSLQTFCDSDWTCDTSDRRSTSGFIAFLGSNPISWYSKKQS 306

Query: 121 TVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHAR 180
           TVSRSST+AEY SLATTTADLYWIRQLLCDLHVPLKT+PTLWCDNV AISL HNPVFHAR
Sbjct: 307 TVSRSSTEAEYRSLATTTADLYWIRQLLCDLHVPLKTTPTLWCDNVFAISLVHNPVFHAR 366

Query: 181 TKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESS 206
           TKHIEIDYHFVREKVF KDISI YISSNNQL DILT PLLSPTFLHL DKLLTQPESS
Sbjct: 367 TKHIEIDYHFVREKVFRKDISIRYISSNNQLVDILTKPLLSPTFLHLGDKLLTQPESS 424

[Close]

BLAST of Pay0012580 vs. NCBI nr
Match: XP_016901044.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 186/240 (77.50%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVS--------------- 60
           MSTSLDLYTI PPFNDPSLY RL+GSLQYLTFT PDIAF VN  S               
Sbjct: 1   MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVK 60

Query: 61  -------------------LFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQ 120
                              LFSLQTFCD +WAGDTSDRRSTS FIAFLGSNPISWSSKKQ
Sbjct: 61  RILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNPISWSSKKQ 120

Query: 121 STVSRSSTKAEYHSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 180
           STVSRSST+AEY SLATTT DLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA
Sbjct: 121 STVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHA 180

Query: 181 RTKHIEIDYHFVREKVFHKDISICYISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           RTKHIEIDYHFVR+KV  KDISI YI SNNQLADILT PLLSPTFLHLRDKLLTQ ESSV
Sbjct: 181 RTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV 240

[Close]

BLAST of Pay0012580 vs. NCBI nr
Match: KAA0054006.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK20691.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 182/215 (84.65%), Postives = 183/215 (85.12%), Query Frame = 0


Query: 1   MSTSLDLYTIVPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLFSLQTFCDSNWA-- 60
           MSTSLDLYTI PPFNDPSLY RLV SLQYLTFTRPDIAFSVN VS F  +       A  
Sbjct: 11  MSTSLDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVK 70

Query: 61  -------GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEYHSLATTTADLYWI 120
                  GDTSDRRSTSGFIAFLGSN ISWSSKKQSTVSRSSTKAEYHSLA TTADLYWI
Sbjct: 71  RILKYLHGDTSDRRSTSGFIAFLGSNLISWSSKKQSTVSRSSTKAEYHSLAITTADLYWI 130

Query: 121 RQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVREKVFHKDISICY 180
           RQLLCDLHVPLKTSPTLWCDNVS I LAHN VFHARTKHIEIDYHFVREKV  KDISI Y
Sbjct: 131 RQLLCDLHVPLKTSPTLWCDNVSTIPLAHNSVFHARTKHIEIDYHFVREKVLRKDISIRY 190

Query: 181 ISSNNQLADILTMPLLSPTFLHLRDKLLTQPESSV 207
           ISSNNQLADILT PLLSPTFLHLRDKLLTQPESSV
Sbjct: 191 ISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV 225

[Close]

BLAST of Pay0012580 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31
Identity = 82/219 (37.44%), Postives = 117/219 (53.42%), Query Frame = 0


Query: 14  FNDPSLYRRLVGSLQYLTFTRPDIAFSVNHVSLFS------------------------- 73
           F D   YRRL+G L YL  TR DI+F+VN +S FS                         
Sbjct: 372 FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431

Query: 74  ----------LQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEY 133
                     LQ F D+++      RRST+G+  FLG++ ISW SKKQ  VS+SS +AEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491

Query: 134 HSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFV 193
            +L+  T ++ W+ Q   +L +PL     L+CDN +AI +A N VFH RTKHIE D H V
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551

Query: 194 REK-VFHKDISICYISSNNQ--LADILTMPLLSPTFLHL 195
           RE+ V+   +S  + + + Q    + L+ P+L  T +++
Sbjct: 552 RERSVYQATLSYSFQAYDEQDGFTEYLS-PILRGTIMYI 589

[Close]

BLAST of Pay0012580 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-24
Identity = 61/132 (46.21%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 14  FNDPSLYRRLVGSLQYLTFTRPDIAFSVNHV----------------------------- 73
           + DPS +R +VG+LQYLT TRPDI+++VN V                             
Sbjct: 94  YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHG 153

Query: 74  ------SLFSLQTFCDSNWAGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSRSSTKAEY 111
                 S  ++Q FCDS+WAG TS RRST+GF  FLG N ISWS+K+Q TVSRSST+ EY
Sbjct: 154 LYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEY 213

The following BLAST results are available for this feature:

BLAST of Pay0012580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.3e-44	42.67	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	6.7e-44	43.12	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	3.5e-29	37.02	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	8.5e-23	46.21	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	1.1e-22	33.67	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Pay0012580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CH60	2.6e-99	88.84	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TPR4	1.2e-96	79.58	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7TWG2	1.5e-94	78.15	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S4DYI8	5.6e-94	77.50	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3DAS3	7.5e-91	84.65	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Pay0012580 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11141.1	5.3e-99	88.84	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0045362.1	2.5e-96	79.58	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0047933.1	3.0e-94	78.15	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_016901044.1	1.2e-93	77.50	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0054006.1	1.6e-90	84.65	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK20691.1 putative m...	[more]

BLAST of Pay0012580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.1e-31	37.44	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.0e-24	46.21	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 76..198
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 76..198
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 50..186 e-value: 1.02672E-77 score: 227.351
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 12..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012580.1	Pay0012580.1	mRNA