Pay0012480 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012480
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Replication factor C subunit 3
Location	chr08: 21847801 .. 21854107 (+)
RNA-Seq Expression	Pay0012480
Synteny	Pay0012480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATTTAAAGTTTAGACGGATACAAACACAAAGTTCGGAGGTAAATTGAAATTTTTCTTAACAAGGAAAAAAAGAAAAAAACTAAAGTCCACAGCGAACTACTGGGGCTTTCGTTTCCCCCTCCTCATCAGCCATCAGTTCTGTTTCTTTTTCCCGCCATTTCAAGCCTCGCCTAAACCTTCGCTCTCTCTTTCACTCACACTTCCTTTTTCTCTTTCTCCACGCTCTCTAATCTCCATACACCGGAGAAGATGTTGTGGGTCGACAAGTATCGTCCAAAAACCCTAGACCAGATCACAGTTCACCAAGACGTAGCACAGAATCTCAAGAAATTGGTAACCGGTTTTCGTTGTTTTTTTTTCCTTGCATTCCTTATTTCATACTTCAATTTGGCTTTTTTTGATGTGGGTTTTCCATAAATTTTCTCCTAGGTTAATGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCTGGGAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGACCCAGTGCGGAGAAGGTATTGAGTCTTGATGTTTATTTTACTGTCTCTGAAATTTTGTGATCGTTGTTCTGTCTGTTTGTTGTGTTTGATCATATCTTGCCTTTTTCCTGCAGGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGTAAGTTTCGGTTGTTTATGACAATAATTTTCATCTTTTTTAATTAAAAAAGTTGAATTTCAATAAAAGGGGTCAAGTTCTTAAATAACTACTTTTTTAGTTTTAAAATTTGGCTTGATTTTTGGAAACATTGGTAGAGAGTAGATACCTAATTAAGAAGTTTAGAGGTGGAAGGGACGTGTATAGGCATAATTTCAAAAACTAAAAACCAAAAACCAAATGGTTACCAAATTTGTCCTTAGTGATGCCATCTCTTTTCACATGCGTTTGAAAGCAATTGAATTCAACTTCTGGGAAAGGAGATCTTCTAGTTATCTGTTGATATTATTACTAGTTCAGAATGGTATAGATTAGCATAAAAATTTAACTTGTTGAAGATATTATTTGGCTGTATATCTTTATATTCTCATCATCATCATCATCATCTCTCTCTCTCTCTCTCTCTCTCTCTAAGCCCTTTCTTTTCCTTCTCAGGCTGGAACCAGAACTATTGATATAGAGCTGACAACCTTGTCAAGTGCCAACCATGTGGAGCTCACTCCTAGTGATGCAGGTTTCCAAGATAGGTATATTGTTCAAGAGATAATCAAAGAAATGGCAAAAAACAGACCAATTGATTCCAAAGGGAAAAGAGGACATAAAGGTGGTCATTTTTCCTCACCCCCTCCAACCATATTTATCAGTTGTTTATGCCTGAGTACTTACTGATTCTTTGTGGTTAATGCTTAAAATTGTTAATGATCTCACTAGCAAACAAGTATTAGATAGATTTATTGCTTGCCTAAAAAAAGATCGATTTATTGCTTGTTTGGGATCTTGTTTTATTTACCAGTATGCTTGTATGTGCAAGATTTTATATCTCTATAAGATATTGAGATTTTTAGTGCCATGTATCAGTTTTGGTTCTAAATGATGTTGACAAACTATCAAGAGAAGCTCAGCACTCTCTTAGGAGAACAATGGAGAAATATAGCTCGTACTGTAGGTTAATTCTTTGCTGCAATAGTTCATCAAGAGTTACTGAAGCAATCCGCTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGGTCAGGAGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATGTCTTATTTCTTTTTTGTTCTGAGGTATGAATTTGAGTAAACTAAATGATGGGCTGGAAGAACGTAATAAAATGTCATGTCCCTGACCAATGTGATTATTGATCAATTTTACCTGCATTCAATTTGTTCTTCGACTAAGAACTTGGAGTCGGACAACTATTGGGAACTGACGTCATATTAATAAAGGATGAAAACCCTCCCTATTGCGGCAGTGGTTAATCTAATTATTCTTCAATACGTTATTCTGGCAGTCTATGGGCAACAATTTTCTGGGTGTCTAACTTAATATTTAAATGTAAGTAGGTGAAAGATTGCTTTTCTAATGCTTACCTATATTCACTGCCATTTTCAATTTTTGTTTCATGCTTAAATAATTTAAAGCCTTTCAAGTGATGCCTATATTCAGTAGCTTCTGCCTTTAGTTGTCGTGTAATATATTCTACCTATTTATGTACTCAAACATTTTAGACTAGAAGGAAAAAATACGTTAGTGGATTAAGACTTTTGATTTGCTAGTTGGGACAATGGAAAGCCTTTTCCTGTTTCATAGCGTGGTTTACATTTACGTGAAAAATTAGTCTTCAAAAGTATTTGTTGAAAGTTTAAACATGTTATGTAGTCATTTGGACCTAAAAGCTGTTGAAAAAGTTACGTCCTTTTACAGATTGTCAAGGTTTTAGAGTTCATTGGAAAGAAAGAAGGACTGCAACTTCCATCTGGATTTGCTTCCCGAATTGCAGAAAAATCAAGCCGGAGTTTGCGGAGAGCTATACTATCATTTGAGACTTGTCGTGTTCAACAGTTAGTCTCCACTGGCCCTCTTACAGATCTAAGCTTCTCTCTCACTTCTTATCATAAAAAAATTACCTTGGTAAACAATCTTTAAGGATTGGGACTGAGCTGTTTATTTATTTTATTTTTTGGGTTAGGTATCCTTTTGTCAGTAACCAGGCAATACCACCAATGGATTGGGAGGAGTACATCACTGAGATAGCATCTGACATAATGAAGGAGCAGAGTCCCAAGAGGTATGTCTCATGTACCTTTTTTTGTTGTATTCTGTACTAAAACATACATCTCAATATCATATATCTGTGGTTTCATATACATCAGTTGGGTACCTCTCTAGCATTGTCATTCAAACTGCTTTTGATTCTTAAAATATGCTGCCCTAGTATTTTTCATGACCAAATAATTACATAAGATAAGCAATCCTTGAACTGCTGTGGATGGTATCCTCGATTATGATGATCTTTGTCTGGTTTGGTCATGAATTGAATGAATGAAGATTCCTTTCCTTGTTGACCTTTTCTAGGAAGCAACAAGGATCTTGATCATCTTTGGTGATCTCGTGATTATGCTTCGGCAGTCTAGACTTGTTTATTTCAGTCGTTTGGCCTCAGCGTGGTTGGGCCTAGAGTTTGGCATTGACCACAATAAGCCCTTGGTTCATCTCTCTTTAGTGAAAAAAGCTAGTTTTTGTGAAGAAATGGCATTTGTGCTTTGTTATGGTGTCTTTGGGGTGAGAGATGATATTTTTCCTTTTTGGAAGAGTGGAGCATTCTAGGGAGGAAGTTTAGTGTCCCACAGTCCCCTTTTTGCTTCTGCGTGTAAGGACTTTTGTCATTATCTGTTAGGATCTTGCTTGATTGGAGCCAATTTTCTTTTAGTGTGCCTGATTTTGGGGATTGTTATTTTTTTCTTGGTATGCCTCTTGTATTCTTTCATTTTTTTCTCAATGAAAGTTCGGTAGGAAAGACACATGTTCTTGACTTTTGTTTTTGTTGAGCAGAGTTGTAGAAATGTGAAAAATTGCAATTGCCTAATAGAAATATATATGTGGAGAACTAATAACTACTTTAACTGTCGTATAACTAGTTGGAGAATTGTGTGAAGTCCGAAATAAATGGACTATTTTTTTGTGTTACAGATTGTTCCAGGTTCGTGGGAAGTTATATGAGTTACTGGTGAATTGTATCCCTCCGGAGATCATATTGAAGGTAATCATTCTTCCCCAATTTCTATTGATTTTTTTTTCTCTGTTTTAATGTGATACTCATATTATCTTTTTACTCAGAGACTGCTTTATGAGCTACTCAAGAAATTGGATGCTGAATTAAAGCATGAGGTCTGTCATTGGGCTGCATATTATGTAAGTTGAATTTTGGCCTTTCAATTTGTTTAAATTTCTTTTCTATTATTCCACTTTTGCTGGGAATTGGAATATCAATATCATTGAAGTAAATTGTCCTCTTTTTCTTATATCAAGTTTTCCTTGTTTTGCAATTTCTCGAATTTTTTGGTCATAACTAACTAACAGATTAGATCCTAGACTTGATAGATTGAATGTATGTGGACATATATTGGAGAGTAGTTTTTCAAAATTAAATATTTTTCTTTACTTTTGAAAGAAACACCAATTAAGTGTCGCCTCCAAAGCACTTTAAGAACCTGTGTTAAATTTGGTGAATATTGATGGATGGAGAGGTTCTGAGTATTGAATAAAACAAACTTATATCGAGATCTATGATGGATATAGATAAAAGCAACGAAGTGAAGAATTTTAACCATATACGTCTTTCTTTTTTCCTCTGGTTCTATTAGTCTGTATAATTTCAACCATGTTTTAATCTCAACGTTATCTTATTAGTTGTCTGCACTGTATACTAGCCTATAGATCTACAAGTCTAGAATTATTTACTCTTCAGAACGCGGTCATTTCATTTTCTCAACTATTTACTTTTTGCCTGACTTTTGAACTTTTTCTAATATCATTGAATAAATACCAAAAGTGAACTGGTTGTGCGCTTCACTTCATTTCCAATTTTCCATGCCGTAGACAATTTGTTCCTAAAGACGTCTGGCTAAATTTCCATCACGATCACATAAGAAGAATCATCTACTCATTTAAGTTTGTATAATTTTGTGAATACTGTAGTGCGTTATATATCTACGTGCGTTGTATATCTACATGCATTAATTCAGCAATATGATATCACAAACGAGACATGGCTAAACCATCTTGGAATGACTTGGTGGTAAAAATAGGAGACCAGTCTTTGTAACTAATCAAGAGGTCATGGCTTCAATCCATAGTCATGATGGTCACCTTCTTAGGAATTAATTTCCTATGAGTTTCCTAATTTTCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTACAGGCTGTCTTGTGAGATTAGTCTAGATGCGTGTAAGTTGGTCCAGACACTTACAGATATGAAAAAAGAAAAAAAAAAGATGAAAAATGGCCGGAGAGAGTTTCACCTTTTGTCAATTTTTCATTTTTGGTTAAATCTTTTTCCAGGAACACAGGATGCGTCTTGGACAGAAAGCCATCTTCCACATAGAAGGTAAATGTATTCAGCATACACATAGCACGGAGTAACTGTTCTGACACAAAAATATAACTTCTGTGTTCTTACTTCCTCTGGTTTTATTAGTTAGCCCGGCTAACTTAGCCACAATCATAATTTCATTTTAAGAACCTTTAATCCATCAAATAATGGATAGATACCGTCATACAATTTGATGGTTTGGAAATGATCGGGCTATCCATGTTAAACTGAAAAAGAAATTGTTGCCTGCAACTTTAGAGTAGTGAGTTTTGAATGTTTTTATATCGTGAATTTGACTTTTCATGATCTGACATTTTGTTAGGATGCTTTCTAACTAGAAGTAAGATCGGTAGTATATTCAATAACTTTCTGTCTAATTATCCTTATATCTCTTAATACTACTGTATAATATTCTTATATAGGTGCCTTATACATGTGTAAAAAGATTTCTTGTCTCTAAGTTCTCTATCTTGACGAAGGCAAAATTCGCTCTGTCAGTTTTGATTTTTGAAGTATTATTTTTGTCTGATGATGCAGCTTTTGTGGCGAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAAAGAGAAGAAAAGTAGAGCCTGAAATTATTTCATTCAGGAAAAGCAATTGTAAGTTCATAGATCTGCTGTGACATTGAATCAAGTTAATCTGATGTATTTATTATATCTTCTTTAGTCAGTTTGGTATGATACTCTAGATGTTCATCCTCCTTTAGGTTTTCTCTATTAGGGAACTTGAAGCTGCACTTTGAGGGATTTGAACTGAATCTTACATGGGGAAAAAATATTTCCAGTCATTTTGTAGCACTAATAGAAAAGAGAGGCCATGCTCCCATCATTGATAATTGGCTGTTTTTTTCTCCTCTTTTTCTCTCTGGTATTTCTTCTTTGTTTAATTTGCAAACGTTTATAATTAGCATTTAGTTTTGTAATTCCTAGGATAGAAAATAGAAATAATAAATTCTAAACTCTTAAAACCACGATTAAATTCTAAACTCTTAAAATGACCAAATTTATATTTTAACCATATTCTTTTTATCCTATTTCTGAATTTTTTTTGCCTCCATGAAGAAAGCAATTCAATGCGTTAACATACAAG

mRNA sequence

ATTAATTTAAAGTTTAGACGGATACAAACACAAAGTTCGGAGGTAAATTGAAATTTTTCTTAACAAGGAAAAAAAGAAAAAAACTAAAGTCCACAGCGAACTACTGGGGCTTTCGTTTCCCCCTCCTCATCAGCCATCAGTTCTGTTTCTTTTTCCCGCCATTTCAAGCCTCGCCTAAACCTTCGCTCTCTCTTTCACTCACACTTCCTTTTTCTCTTTCTCCACGCTCTCTAATCTCCATACACCGGAGAAGATGTTGTGGGTCGACAAGTATCGTCCAAAAACCCTAGACCAGATCACAGTTCACCAAGACGTAGCACAGAATCTCAAGAAATTGGTTAATGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCTGGGAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGACCCAGTGCGGAGAAGGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGCTGGAACCAGAACTATTGATATAGAGCTGACAACCTTGTCAAGTGCCAACCATGTGGAGCTCACTCCTAGTGATGCAGGTTTCCAAGATAGGTATATTGTTCAAGAGATAATCAAAGAAATGGCAAAAAACAGACCAATTGATTCCAAAGGGAAAAGAGGACATAAAGTTTTGGTTCTAAATGATGTTGACAAACTATCAAGAGAAGCTCAGCACTCTCTTAGGAGAACAATGGAGAAATATAGCTCGTACTGTAGGTTAATTCTTTGCTGCAATAGTTCATCAAGAGTTACTGAAGCAATCCGCTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGATTGTCAAGGTTTTAGAGTTCATTGGAAAGAAAGAAGGACTGCAACTTCCATCTGGATTTGCTTCCCGAATTGCAGAAAAATCAAGCCGGAGTTTGCGGAGAGCTATACTATCATTTGAGACTTGTCGTGTTCAACAGTATCCTTTTGTCAGTAACCAGGCAATACCACCAATGGATTGGGAGGAGTACATCACTGAGATAGCATCTGACATAATGAAGGAGCAGAGTCCCAAGAGATTGTTCCAGGTTCGTGGGAAGTTATATGAGTTACTGGTGAATTGTATCCCTCCGGAGATCATATTGAAGAGACTGCTTTATGAGCTACTCAAGAAATTGGATGCTGAATTAAAGCATGAGGTCTGTCATTGGGCTGCATATTATGAACACAGGATGCGTCTTGGACAGAAAGCCATCTTCCACATAGAAGCTTTTGTGGCGAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAAAGAGAAGAAAAGTAGAGCCTGAAATTATTTCATTCAGGAAAAGCAATTGTAAGTTCATAGATCTGCTGTGACATTGAATCAAGTTAATCTGATGTATTTATTATATCTTCTTTAGTCAGTTTGGTATGATACTCTAGATGTTCATCCTCCTTTAGGTTTTCTCTATTAGGGAACTTGAAGCTGCACTTTGAGGGATTTGAACTGAATCTTACATGGGGAAAAAATATTTCCAGTCATTTTGTAGCACTAATAGAAAAGAGAGGCCATGCTCCCATCATTGATAATTGGCTGTTTTTTTCTCCTCTTTTTCTCTCTGGTATTTCTTCTTTGTTTAATTTGCAAACGTTTATAATTAGCATTTAGTTTTGTAATTCCTAGGATAGAAAATAGAAATAATAAATTCTAAACTCTTAAAACCACGATTAAATTCTAAACTCTTAAAATGACCAAATTTATATTTTAACCATATTCTTTTTATCCTATTTCTGAATTTTTTTTGCCTCCATGAAGAAAGCAATTCAATGCGTTAACATACAAG

Coding sequence (CDS)

ATGTTGTGGGTCGACAAGTATCGTCCAAAAACCCTAGACCAGATCACAGTTCACCAAGACGTAGCACAGAATCTCAAGAAATTGGTTAATGAACAGGACTGCCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCTGGGAAGAAAACCCTAGTCATGGCCCTTATCCGGCAGATGTTCGGACCCAGTGCGGAGAAGGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGCTGGAACCAGAACTATTGATATAGAGCTGACAACCTTGTCAAGTGCCAACCATGTGGAGCTCACTCCTAGTGATGCAGGTTTCCAAGATAGGTATATTGTTCAAGAGATAATCAAAGAAATGGCAAAAAACAGACCAATTGATTCCAAAGGGAAAAGAGGACATAAAGTTTTGGTTCTAAATGATGTTGACAAACTATCAAGAGAAGCTCAGCACTCTCTTAGGAGAACAATGGAGAAATATAGCTCGTACTGTAGGTTAATTCTTTGCTGCAATAGTTCATCAAGAGTTACTGAAGCAATCCGCTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGATTGTCAAGGTTTTAGAGTTCATTGGAAAGAAAGAAGGACTGCAACTTCCATCTGGATTTGCTTCCCGAATTGCAGAAAAATCAAGCCGGAGTTTGCGGAGAGCTATACTATCATTTGAGACTTGTCGTGTTCAACAGTATCCTTTTGTCAGTAACCAGGCAATACCACCAATGGATTGGGAGGAGTACATCACTGAGATAGCATCTGACATAATGAAGGAGCAGAGTCCCAAGAGATTGTTCCAGGTTCGTGGGAAGTTATATGAGTTACTGGTGAATTGTATCCCTCCGGAGATCATATTGAAGAGACTGCTTTATGAGCTACTCAAGAAATTGGATGCTGAATTAAAGCATGAGGTCTGTCATTGGGCTGCATATTATGAACACAGGATGCGTCTTGGACAGAAAGCCATCTTCCACATAGAAGCTTTTGTGGCGAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAA

Protein sequence

MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG

Homology

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BLAST of Pay0012480 vs. ExPASy Swiss-Prot
Match: Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 3.0e-177
Identity = 301/354 (85.03%), Postives = 335/354 (94.63%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPK+LD++ VH+D+AQ LKKLV+EQDCPHLLFYGPSGSGKKTL+MAL++Q++G
Sbjct: 1   MLWVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVEN+ WKVDAG+RTID+ELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPID+KGK+G+KVLVLN+VDKLSREAQHSLRRTMEKYSS CRLILCCNSSS+VTEAI+SR
Sbjct: 121 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRIN P++E+IVKVLEF+ KKE LQLP GFA+RIAEKS+RSLRRAILS ETCRVQ Y
Sbjct: 181 CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PF  NQ I PMDWEEY+ EIA+D+MKEQSPK+LFQVRGK+YELLVNCIPPE+ILKRLL+E
Sbjct: 241 PFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLD+ELK EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLISTFG
Sbjct: 301 LLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG 354

[Close]

BLAST of Pay0012480 vs. ExPASy Swiss-Prot
Match: Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 6.1e-170
Identity = 287/354 (81.07%), Postives = 326/354 (92.09%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLD++TVH  VAQNLKKLV EQDCPHLLFYGPSGSGKKTLVMALI+QMFG
Sbjct: 1   MLWVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
             A+KVK+ENKTWK+D G+R I+IEL  LSSA+HVE+ PSDAGFQDRY+VQE+IKEMAKN
Sbjct: 61  AGADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPID+KGKR  KVLVLN+VDKLSREAQHSLRRTMEKYS+ CRLILCCNSSS+VTEA+RSR
Sbjct: 121 RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVR+N P+E+QIV+VLEFIGKKE LQLP GFA+RIA +S+R+LRRAIL FETC+VQQY
Sbjct: 181 CLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PF SNQ  PP+DWE+Y++EIA+DIMKEQSPKRLF VR K YELLVNCIPPE ILK+LL E
Sbjct: 241 PFTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLD++LKHE+CHWAA+YEH+MRLG KAIFH+EAFVAKFMSIYK FL+STFG
Sbjct: 301 LLKKLDSDLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVSTFG 354

[Close]

BLAST of Pay0012480 vs. ExPASy Swiss-Prot
Match: P40938 (Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2)

HSP 1 Score: 387.5 bits (994), Expect = 1.6e-106
Identity = 188/348 (54.02%), Postives = 262/348 (75.29%), Query Frame = 0


Query: 2   LWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGP 61
           LWVDKYRP +L ++  H++ A  L+ LV   D PHLL YGPSG+GKKT +M ++R+++G 
Sbjct: 3   LWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGV 62

Query: 62  SAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNR 121
             EK+++E++T    +  +   IE++T++S  H+E+ PSDAG  DR ++QE++K +A+++
Sbjct: 63  GVEKLRIEHQTITTPSKKK---IEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQ 122

Query: 122 PIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRC 181
            +++  +R  KV++L +VDKL+++AQH+LRRTMEKY S CRLILCCNS+S+V   IRSRC
Sbjct: 123 QLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRC 182

Query: 182 LNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYP 241
           L VR+  P+ E I  VL  + KKEGL LPS  A R+AEKS R+LR+A+L  E CRVQQYP
Sbjct: 183 LAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYP 242

Query: 242 FVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYEL 301
           F ++Q IP  DWE Y+ E A+ I+ +Q+P+RL +VRG+LYELL +CIPPEII+K LL EL
Sbjct: 243 FTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSEL 302

Query: 302 LKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFL 350
           L   D +LK EV   AAYYEHR++LG KAI+H+EAFVAKFM++YK F+
Sbjct: 303 LHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347

[Close]

BLAST of Pay0012480 vs. ExPASy Swiss-Prot
Match: Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 3.6e-106
Identity = 187/348 (53.74%), Postives = 261/348 (75.00%), Query Frame = 0


Query: 2   LWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGP 61
           LWVDKYRP +L ++  H++ A  L+ LV   D PHLL YGPSG+GKKT +M ++R+++G 
Sbjct: 3   LWVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGI 62

Query: 62  SAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNR 121
             EK+++E++T    +  +   IE++T++S  H+E+ PSDAG  DR ++QE++K +A+++
Sbjct: 63  GVEKLRIEHQTITTPSKKK---IEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQ 122

Query: 122 PIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRC 181
            +++  +R  KV++L +VDKL+++AQH+LRRTMEKY S CRLILCCNS+S+V   IRSRC
Sbjct: 123 QLETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRC 182

Query: 182 LNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYP 241
           L VR+  P+ E I  VL  + +KEGL LPS  A R+AEKS R+LR+A+L  E CRVQQYP
Sbjct: 183 LAVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYP 242

Query: 242 FVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYEL 301
           F  +Q IP  DWE Y+ E A+ I+ +Q+P+RL +VRG+LYELL +CIPPEII+K LL EL
Sbjct: 243 FTEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSEL 302

Query: 302 LKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFL 350
           L   D +LK EV   AAYYEHR++LG KAI+H+EAFVAKFM++YK F+
Sbjct: 303 LHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347

[Close]

BLAST of Pay0012480 vs. ExPASy Swiss-Prot
Match: Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.7e-106
Identity = 187/348 (53.74%), Postives = 261/348 (75.00%), Query Frame = 0


Query: 2   LWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGP 61
           LWVDKYRP +L Q+  H++ A  L+ LV   D PHLL YGPSG+GKKT +M ++R+++G 
Sbjct: 3   LWVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGV 62

Query: 62  SAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKNR 121
             EK+++E++T    +  +   IE++T++S  H+E+ PSDAG  DR ++QE++K +A+++
Sbjct: 63  GVEKLRIEHQTITTPSKKK---IEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQ 122

Query: 122 PIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRC 181
            +++  ++  KV++L +VDKL+++AQH+LRRTMEKY S CRLILCCNS+S+V   IRSRC
Sbjct: 123 QLETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRC 182

Query: 182 LNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQYP 241
           L VR+  P+ E I  VL  + KKEGL LP   A R+AEKS R+LR+A+L  E CRVQQYP
Sbjct: 183 LAVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYP 242

Query: 242 FVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYEL 301
           F ++Q IP  DWE Y+ E A+ I+ +Q+P+RL +VRG+LYELL +CIPPEII+K LL EL
Sbjct: 243 FTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSEL 302

Query: 302 LKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFL 350
           L   D +LK EV   AAYYEHR++LG KAI+H+EAFVAKFM++YK F+
Sbjct: 303 LHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347

[Close]

BLAST of Pay0012480 vs. ExPASy TrEMBL
Match: A0A1S3B4A5 (replication factor C subunit 3 OS=Cucumis melo OX=3656 GN=LOC103486020 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.4e-199
Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
           PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFV NQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVGNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 354

[Close]

BLAST of Pay0012480 vs. ExPASy TrEMBL
Match: A0A5D3C0B6 (Replication factor C subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00180 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.4e-199
Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
           PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFV NQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVGNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 354

[Close]

BLAST of Pay0012480 vs. ExPASy TrEMBL
Match: A0A0A0KYY3 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G579870 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 2.7e-197
Identity = 349/354 (98.59%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
           PSA+KVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  PSADKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQI KVLE+IGKKEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFVSNQAIPPMDWEEYITEIAS+IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVSNQAIPPMDWEEYITEIASEIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 354

[Close]

BLAST of Pay0012480 vs. ExPASy TrEMBL
Match: A0A6J1DMG0 (replication factor C subunit 3 OS=Momordica charantia OX=3673 GN=LOC111021793 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.2e-192
Identity = 341/354 (96.33%), Postives = 346/354 (97.74%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQ+TVHQDVAQNLKKLV EQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQVTVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVENKTWKVDAGTRTIDIELTTLSS NHVELTPSDAGFQDRYIVQ+IIKEMAKN
Sbjct: 61  ASAEKVKVENKTWKVDAGTRTIDIELTTLSSTNHVELTPSDAGFQDRYIVQDIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQIVKVLE IGKKEGLQLP GFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIVKVLELIGKKEGLQLPPGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PF SNQAIPPMDWEEYI+EIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFASNQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAEL+HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLIS FG
Sbjct: 301 LLKKLDAELQHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISAFG 354

[Close]

BLAST of Pay0012480 vs. ExPASy TrEMBL
Match: A0A6J1GG01 (replication factor C subunit 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453820 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 2.0e-192
Identity = 338/354 (95.48%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLV EQDCPHLLF+GPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFFGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVENKTWKVDAGTR ++IELTT+SS NHVELTPSDAGFQDRYIVQEIIK+MAKN
Sbjct: 61  ASAEKVKVENKTWKVDAGTRNVEIELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPT++QIVKVLEFIGKKEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTDDQIVKVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFVSNQAIPPMDWEEYI+EIASDIMKEQSPKRL+QVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVSNQAIPPMDWEEYISEIASDIMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQK+IFHIEAFVAKFMSIYK+FLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG 354

[Close]

BLAST of Pay0012480 vs. NCBI nr
Match: XP_008442036.1 (PREDICTED: replication factor C subunit 3 [Cucumis melo] >XP_008442037.1 PREDICTED: replication factor C subunit 3 [Cucumis melo] >XP_008442038.1 PREDICTED: replication factor C subunit 3 [Cucumis melo] >KAA0041829.1 replication factor C subunit 3 [Cucumis melo var. makuwa] >TYK05351.1 replication factor C subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 703.0 bits (1813), Expect = 1.3e-198
Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
           PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFV NQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVGNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 354

[Close]

BLAST of Pay0012480 vs. NCBI nr
Match: XP_004144654.1 (replication factor C subunit 3 [Cucumis sativus] >KGN54900.1 hypothetical protein Csa_012378 [Cucumis sativus])

HSP 1 Score: 697.6 bits (1799), Expect = 5.6e-197
Identity = 349/354 (98.59%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
           PSA+KVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  PSADKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQI KVLE+IGKKEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFVSNQAIPPMDWEEYITEIAS+IMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVSNQAIPPMDWEEYITEIASEIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 354

[Close]

BLAST of Pay0012480 vs. NCBI nr
Match: XP_022154548.1 (replication factor C subunit 3 [Momordica charantia] >XP_022154549.1 replication factor C subunit 3 [Momordica charantia])

HSP 1 Score: 682.2 bits (1759), Expect = 2.4e-192
Identity = 341/354 (96.33%), Postives = 346/354 (97.74%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQ+TVHQDVAQNLKKLV EQDCPHLLFYGPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQVTVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVENKTWKVDAGTRTIDIELTTLSS NHVELTPSDAGFQDRYIVQ+IIKEMAKN
Sbjct: 61  ASAEKVKVENKTWKVDAGTRTIDIELTTLSSTNHVELTPSDAGFQDRYIVQDIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPTEEQIVKVLE IGKKEGLQLP GFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTEEQIVKVLELIGKKEGLQLPPGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PF SNQAIPPMDWEEYI+EIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFASNQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAEL+HEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLIS FG
Sbjct: 301 LLKKLDAELQHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISAFG 354

[Close]

BLAST of Pay0012480 vs. NCBI nr
Match: XP_022950838.1 (replication factor C subunit 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 681.4 bits (1757), Expect = 4.1e-192
Identity = 338/354 (95.48%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVHQDVAQNLKKLV EQDCPHLLF+GPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVTEQDCPHLLFFGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVENKTWKVDAGTR ++IELTT+SS NHVELTPSDAGFQDRYIVQEIIK+MAKN
Sbjct: 61  ASAEKVKVENKTWKVDAGTRNVEIELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPT++QIVKVLEFIGKKEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTDDQIVKVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFVSNQAIPPMDWEEYI+EIASDIMKEQSPKRL+QVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVSNQAIPPMDWEEYISEIASDIMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQK+IFHIEAFVAKFMSIYK+FLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG 354

[Close]

BLAST of Pay0012480 vs. NCBI nr
Match: XP_022978217.1 (replication factor C subunit 3 [Cucurbita maxima])

HSP 1 Score: 679.1 bits (1751), Expect = 2.1e-191
Identity = 336/354 (94.92%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPKTLDQITVH+DVAQNLKKLV EQDCPHLLF+GPSGSGKKTLVMALIRQMFG
Sbjct: 1   MLWVDKYRPKTLDQITVHEDVAQNLKKLVTEQDCPHLLFFGPSGSGKKTLVMALIRQMFG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVENKTWKVDAGTR ++IELTT+SS NHVELTPSDAGFQDRYIVQEIIK+MAKN
Sbjct: 61  ASAEKVKVENKTWKVDAGTRNVEIELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
Sbjct: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRINGPT+++IVKVLEFIGKKEGLQLPSGFASRIAEKS+RSLRRAILSFETCRVQQY
Sbjct: 181 CLNVRINGPTDDEIVKVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PFVSNQAIPPMDWEEYI+EIASDIMKEQSPKRL+QVRGKLYELLVNCIPPEIILKRLLYE
Sbjct: 241 PFVSNQAIPPMDWEEYISEIASDIMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLDAELKHEVCHWAAYYEHRMRLGQK+IFHIEAFVAKFMSIYK+FLISTFG
Sbjct: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG 354

[Close]

BLAST of Pay0012480 vs. TAIR 10
Match: AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 622.5 bits (1604), Expect = 2.1e-178
Identity = 301/354 (85.03%), Postives = 335/354 (94.63%), Query Frame = 0


Query: 1   MLWVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFG 60
           MLWVDKYRPK+LD++ VH+D+AQ LKKLV+EQDCPHLLFYGPSGSGKKTL+MAL++Q++G
Sbjct: 1   MLWVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYG 60

Query: 61  PSAEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDRYIVQEIIKEMAKN 120
            SAEKVKVEN+ WKVDAG+RTID+ELTTLSS NHVELTPSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 121 RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR 180
           RPID+KGK+G+KVLVLN+VDKLSREAQHSLRRTMEKYSS CRLILCCNSSS+VTEAI+SR
Sbjct: 121 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 180

Query: 181 CLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAILSFETCRVQQY 240
           CLNVRIN P++E+IVKVLEF+ KKE LQLP GFA+RIAEKS+RSLRRAILS ETCRVQ Y
Sbjct: 181 CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNY 240

Query: 241 PFVSNQAIPPMDWEEYITEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE 300
           PF  NQ I PMDWEEY+ EIA+D+MKEQSPK+LFQVRGK+YELLVNCIPPE+ILKRLL+E
Sbjct: 241 PFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHE 300

Query: 301 LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKTFLISTFG 355
           LLKKLD+ELK EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLISTFG
Sbjct: 301 LLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG 354

[Close]

BLAST of Pay0012480 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-27
Identity = 77/234 (32.91%), Postives = 115/234 (49.15%), Query Frame = 0


Query: 3   WVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPS 62
           WV+KYRPK +  +   ++V + L   +   DCPH+LFYGP G+GK T  +A+  Q+FGP 
Sbjct: 11  WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63  AEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDR--YIVQEIIKEMAKN 122
             K +V                          +EL  SD    DR   +V+  IK+ A  
Sbjct: 71  LYKSRV--------------------------LELNASD----DRGINVVRTKIKDFAAV 130

Query: 123 RPIDSKGKRGH-----KVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTE 182
               +  + G+     K+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E
Sbjct: 131 AVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIE 190

Query: 183 AIRSRCLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAI 230
            + SRC   R    +EE +   +  I  +EGL L     S ++  S   LRRAI
Sbjct: 191 PLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 214

[Close]

BLAST of Pay0012480 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-27
Identity = 77/234 (32.91%), Postives = 115/234 (49.15%), Query Frame = 0


Query: 3   WVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPS 62
           WV+KYRPK +  +   ++V + L   +   DCPH+LFYGP G+GK T  +A+  Q+FGP 
Sbjct: 11  WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63  AEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDR--YIVQEIIKEMAKN 122
             K +V                          +EL  SD    DR   +V+  IK+ A  
Sbjct: 71  LYKSRV--------------------------LELNASD----DRGINVVRTKIKDFAAV 130

Query: 123 RPIDSKGKRGH-----KVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTE 182
               +  + G+     K+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E
Sbjct: 131 AVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIE 190

Query: 183 AIRSRCLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAI 230
            + SRC   R    +EE +   +  I  +EGL L     S ++  S   LRRAI
Sbjct: 191 PLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 214

[Close]

BLAST of Pay0012480 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 112.8 bits (281), Expect = 5.5e-25
Identity = 74/234 (31.62%), Postives = 111/234 (47.44%), Query Frame = 0


Query: 3   WVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPS 62
           WV+KYRPK +  +   ++V + L   +   DCPH+LFYGP G+GK T  +A+  Q+FG  
Sbjct: 11  WVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGV- 70

Query: 63  AEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDR--YIVQEIIKEMAKN 122
                                           +EL  SD    DR   +V+  IK+ A  
Sbjct: 71  --------------------------------LELNASD----DRGINVVRTKIKDFAAV 130

Query: 123 RPIDSKGKRGH-----KVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTE 182
               +  + G+     K+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E
Sbjct: 131 AVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIE 190

Query: 183 AIRSRCLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAI 230
            + SRC   R    +EE +   +  I  +EGL L     S ++  S   LRRAI
Sbjct: 191 PLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 207

[Close]

BLAST of Pay0012480 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-24
Identity = 78/234 (33.33%), Postives = 113/234 (48.29%), Query Frame = 0


Query: 3   WVDKYRPKTLDQITVHQDVAQNLKKLVNEQDCPHLLFYGPSGSGKKTLVMALIRQMFGPS 62
           WV+KYRPK +      +DVA        E+ CPH+LFYGP G+GK T  +A+  Q+FGP 
Sbjct: 11  WVEKYRPKQV------KDVAH------QEEVCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

Query: 63  AEKVKVENKTWKVDAGTRTIDIELTTLSSANHVELTPSDAGFQDR--YIVQEIIKEMAKN 122
             K +V                          +EL  SD    DR   +V+  IK+ A  
Sbjct: 71  LYKSRV--------------------------LELNASD----DRGINVVRTKIKDFAAV 130

Query: 123 RPIDSKGKRGH-----KVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTE 182
               +  + G+     K+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E
Sbjct: 131 AVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIE 190

Query: 183 AIRSRCLNVRINGPTEEQIVKVLEFIGKKEGLQLPSGFASRIAEKSSRSLRRAI 230
            + SRC   R    +EE +   +  I  +EGL L     S ++  S   LRRAI
Sbjct: 191 PLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 202

The following BLAST results are available for this feature:

BLAST of Pay0012480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXX4	3.0e-177	85.03	Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1	[more]
Q852K3	6.1e-170	81.07	Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ...	[more]
P40938	1.6e-106	54.02	Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2	[more]
Q8R323	3.6e-106	53.74	Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1	[more]
Q2TBV1	4.7e-106	53.74	Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1	[more]

BLAST of Pay0012480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4A5	6.4e-199	99.72	replication factor C subunit 3 OS=Cucumis melo OX=3656 GN=LOC103486020 PE=4 SV=1	[more]
A0A5D3C0B6	6.4e-199	99.72	Replication factor C subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KYY3	2.7e-197	98.59	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G579870 PE=4 SV...	[more]
A0A6J1DMG0	1.2e-192	96.33	replication factor C subunit 3 OS=Momordica charantia OX=3673 GN=LOC111021793 PE...	[more]
A0A6J1GG01	2.0e-192	95.48	replication factor C subunit 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Pay0012480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442036.1	1.3e-198	99.72	PREDICTED: replication factor C subunit 3 [Cucumis melo] >XP_008442037.1 PREDICT...	[more]
XP_004144654.1	5.6e-197	98.59	replication factor C subunit 3 [Cucumis sativus] >KGN54900.1 hypothetical protei...	[more]
XP_022154548.1	2.4e-192	96.33	replication factor C subunit 3 [Momordica charantia] >XP_022154549.1 replication...	[more]
XP_022950838.1	4.1e-192	95.48	replication factor C subunit 3 isoform X2 [Cucurbita moschata]	[more]
XP_022978217.1	2.1e-191	94.92	replication factor C subunit 3 [Cucurbita maxima]	[more]

BLAST of Pay0012480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27740.1	2.1e-178	85.03	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.1	2.0e-27	32.91	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	2.0e-27	32.91	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	5.5e-25	31.62	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	3.6e-24	33.33	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 33..192 e-value: 4.3E-6 score: 36.3
None	No IPR available	GENE3D	1.10.8.60		coord: 190..248 e-value: 3.4E-13 score: 50.9
None	No IPR available	PFAM	PF13177	DNA_pol3_delta2	coord: 18..187 e-value: 8.1E-14 score: 52.0
None	No IPR available	GENE3D	1.20.272.10		coord: 252..345 e-value: 2.8E-39 score: 135.2
None	No IPR available	PANTHER	PTHR11669:SF1	REPLICATION FACTOR C SUBUNIT 3	coord: 2..346
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 2..346
None	No IPR available	CDD	cd00009	AAA	coord: 19..181 e-value: 2.52276E-9 score: 53.3039
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..189 e-value: 5.3E-55 score: 188.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..239
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 251..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012480.3	Pay0012480.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity