Pay0012475 (gene) Melon (Payzawat) v1

Overview
NamePay0012475
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr05: 23187553 .. 23188021 (-)
RNA-Seq ExpressionPay0012475
SyntenyPay0012475
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAGGCGCTTTAAATACACCCCTTTACATTTTCTAGAACATATGCATCATAATCAAAAATTTCTCATCAAAGCCTAAGGATCCATATCTTCTAAGAGATATGGCAACCCAAAAGCTTGCTACGATGTCATTTGTTGTTTTGGTGATATTCACATGCATTGTATCAACAAGTATGCACTTCACTCATAACTCCTCTAATTCTATAAAACTACTTTTGCTAGAACAATATTTTAAACAATTTATTTTGGAATAATGGAACAGCGAAAGGAGACGTTTTGAACGTGCATTGTGTCCGACCATGCTCTGATACTTATGACGATGAGTCATGTTATAATGATTGCATCCGAGAGAACCTTGGTGCTGGGTTTTGTTACCCAAAGCTACCTAGCACCGATAAAGATTGTTGTTGCAATGTTTGACCAAGAAAAGAGAAATATTTGTTTTTTCTTAATATAAGATTGTGTAAC

mRNA sequence

GGAAAAGGCGCTTTAAATACACCCCTTTACATTTTCTAGAACATATGCATCATAATCAAAAATTTCTCATCAAAGCCTAAGGATCCATATCTTCTAAGAGATATGGCAACCCAAAAGCTTGCTACGATGTCATTTGTTGTTTTGGTGATATTCACATGCATTGTATCAACAACGAAAGGAGACGTTTTGAACGTGCATTGTGTCCGACCATGCTCTGATACTTATGACGATGAGTCATGTTATAATGATTGCATCCGAGAGAACCTTGGTGCTGGGTTTTGTTACCCAAAGCTACCTAGCACCGATAAAGATTGTTGTTGCAATGTTTGACCAAGAAAAGAGAAATATTTGTTTTTTCTTAATATAAGATTGTGTAAC

Coding sequence (CDS)

ATGGCAACCCAAAAGCTTGCTACGATGTCATTTGTTGTTTTGGTGATATTCACATGCATTGTATCAACAACGAAAGGAGACGTTTTGAACGTGCATTGTGTCCGACCATGCTCTGATACTTATGACGATGAGTCATGTTATAATGATTGCATCCGAGAGAACCTTGGTGCTGGGTTTTGTTACCCAAAGCTACCTAGCACCGATAAAGATTGTTGTTGCAATGTTTGA

Protein sequence

MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV
Homology
BLAST of Pay0012475 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+S VVL+IF CI STTKGDVLNVHCVRPCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSTDKDCCCNV 76
          YPKLPSTDKDCCCNV
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of Pay0012475 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+S VVLVIF CIVSTTKGDVLNVHCVRPC DTYDDESCYNDCIRENLGAGFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSTDKDCCCN 75
          YPKLPSTDKDCCCN
Sbjct: 61 YPKLPSTDKDCCCN 74

BLAST of Pay0012475 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-25
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 23 TTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV 76
          T KGD+LNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV
Sbjct: 2  TAKGDILNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV 54

BLAST of Pay0012475 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          M TQKL  +S +V V F+C  S+ +GD L  +CV PCS+   D  C   CI ++ GAGFC
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDL-WNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLP--STDKDCCCN 75
           PKLP  S  K CCCN
Sbjct: 61 VPKLPGISDMKVCCCN 75

BLAST of Pay0012475 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-07
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          M T+KL  +   + V+  C V+ ++G  L  +C+RPCS+TY   SCY DC   N G G C
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGL-WNCIRPCSETYKSLSCYVDCGALNKGTGAC 60

Query: 61 YPKLPSTDKDCCC 74
           PK P +D+  CC
Sbjct: 61 IPKRPVSDEYVCC 72

BLAST of Pay0012475 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+S VVL+IF CI STTKGDVLNVHCVRPCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSTDKDCCCNV 76
          YPKLPSTDKDCCCNV
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of Pay0012475 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 9.2e-33
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+S V+L+I  CIVSTTKGDVLNV+CVRPCSDTYDDESCYNDCIRENLGAGFC
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSTDKDCCCNV 76
          YPKLPSTDKDCCCNV
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of Pay0012475 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 46/50 (92.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 25 KGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCN 75
          KGDVLN+HCV+PCSDTYDDESCYNDCI+ENLGAGFCYPKLPSTDKDCCC+
Sbjct: 15 KGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCS 64

BLAST of Pay0012475 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 3.0e-15
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MA++KL T+  +V+++F    S+ KGD+  + C+RPC D +DD+SCY+DC+R N GAGFC
Sbjct: 1  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFC 60

Query: 61 YPKLPS--TDKDCCCN 75
          YPKLPS   +KDCCCN
Sbjct: 61 YPKLPSVTNEKDCCCN 74

BLAST of Pay0012475 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 1  MATQKLATMSFVVLVIFTCIVSTTKGDVLNVHCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          M TQKL  +S +V V F+C  S+ +GD L  +CV PCS+   D  C   CI ++ GAGFC
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDL-WNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLP--STDKDCCCN 75
           PKLP  S  K CCCN
Sbjct: 61 VPKLPGISDMKVCCCN 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LHG95.3e-3492.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG56.9e-3494.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A0A0LKF52.6e-2596.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
A0A0A0L1R81.3e-0850.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
A0A5A7TJH14.2e-0742.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KGN61228.11.1e-3392.00hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651697.19.2e-3390.67hypothetical protein Csa_006343 [Cucumis sativus][more]
KAE8651701.11.9e-2292.00hypothetical protein Csa_006400, partial [Cucumis sativus][more]
KAG6586428.13.0e-1555.26hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN54497.12.7e-0850.00hypothetical protein Csa_012842 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0012475.1Pay0012475.1mRNA