Pay0012440 (gene) Melon (Payzawat) v1

Overview


Name	Pay0012440
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription termination factor MTEF1
Location	chr06: 4489791 .. 4490888 (-)
RNA-Seq Expression	Pay0012440
Synteny	Pay0012440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGTCTTTTCTCACGGATTTTCCGAAACCCCCTTGAAATCTCTAAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCTAAATCTGCTTCGTTGGCTTCTAATGATGTTCAGCTCAAGAATAATGGGAAGGCTGTAATTGCGTTACTTGCCAATCATGGATTCTCTCAATCACAAATCTCTGATCTTGCCAAGAGGTGGCCTCAAATTCTTTGTGCGAACCCCGAGAAAATCCTATTGCCCAAATTGTTGTTTTTACAATCTAGAGGTTTTTCTTCCCCAGAGATTGCCAAATTAGTATGTGCAATTCCTGTTGCTATAATGGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAGGCCGTGCTTGGAAGTAAGGAGAAGGCTCTCGCTGCCATAAGGCGCTTTCCCGGTATTCTCTCTTGGGATCTTCGAGTTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTGCCGGATTCGACTATTTCATCTTATCTTCAGCGGCAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGAATCCATTGTGTATGACATTGTCCGAGGAAAATATTAATGATACAATGGATTTTTTTGTCAACGAAATTGGATGCGAATCATCTTATCTTGCTAGAAGACCAAGTTTATTTGCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTCATCAAGTTTTGCTGTCAAAGGGTTTGATTGAAAAATACGAGAAATTTACTTGGATGTTTTTCTGTCCTGAAAACTGTTTCATAGAGAAAGTCATCAACCCTCATAAGAAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAAATAATGGATTCTAGCAGATGA

mRNA sequence

ATGTATAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGTCTTTTCTCACGGATTTTCCGAAACCCCCTTGAAATCTCTAAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCTAAATCTGCTTCGTTGGCTTCTAATGATGTTCAGCTCAAGAATAATGGGAAGGCTGTAATTGCGTTACTTGCCAATCATGGATTCTCTCAATCACAAATCTCTGATCTTGCCAAGAGGTGGCCTCAAATTCTTTGTGCGAACCCCGAGAAAATCCTATTGCCCAAATTGTTGTTTTTACAATCTAGAGGTTTTTCTTCCCCAGAGATTGCCAAATTAGTATGTGCAATTCCTGTTGCTATAATGGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAGGCCGTGCTTGGAAGTAAGGAGAAGGCTCTCGCTGCCATAAGGCGCTTTCCCGGTATTCTCTCTTGGGATCTTCGAGTTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTGCCGGATTCGACTATTTCATCTTATCTTCAGCGGCAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGAATCCATTGTGTATGACATTGTCCGAGGAAAATATTAATGATACAATGGATTTTTTTGTCAACGAAATTGGATGCGAATCATCTTATCTTGCTAGAAGACCAAGTTTATTTGCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTCATCAAGTTTTGCTGTCAAAGGGTTTGATTGAAAAATACGAGAAATTTACTTGGATGTTTTTCTGTCCTGAAAACTGTTTCATAGAGAAAGTCATCAACCCTCATAAGAAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAAATAATGGATTCTAGCAGATGA

Coding sequence (CDS)

ATGTATAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGTCTTTTCTCACGGATTTTCCGAAACCCCCTTGAAATCTCTAAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCTAAATCTGCTTCGTTGGCTTCTAATGATGTTCAGCTCAAGAATAATGGGAAGGCTGTAATTGCGTTACTTGCCAATCATGGATTCTCTCAATCACAAATCTCTGATCTTGCCAAGAGGTGGCCTCAAATTCTTTGTGCGAACCCCGAGAAAATCCTATTGCCCAAATTGTTGTTTTTACAATCTAGAGGTTTTTCTTCCCCAGAGATTGCCAAATTAGTATGTGCAATTCCTGTTGCTATAATGGCAAGTTTAAACAAACGAATTATTCCAGCCTTTGATTACATTCAGGCCGTGCTTGGAAGTAAGGAGAAGGCTCTCGCTGCCATAAGGCGCTTTCCCGGTATTCTCTCTTGGGATCTTCGAGTTTCAGTTGGTCCCAATATTGAAATTCTGAAACAATTTGGAGTGCCGGATTCGACTATTTCATCTTATCTTCAGCGGCAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGAATCCATTGTGTATGACATTGTCCGAGGAAAATATTAATGATACAATGGATTTTTTTGTCAACGAAATTGGATGCGAATCATCTTATCTTGCTAGAAGACCAAGTTTATTTGCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTCATCAAGTTTTGCTGTCAAAGGGTTTGATTGAAAAATACGAGAAATTTACTTGGATGTTTTTCTGTCCTGAAAACTGTTTCATAGAGAAAGTCATCAACCCTCATAAGAAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAAATAATGGATTCTAGCAGATGA

Protein sequence

MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGKAVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIPVAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVPDSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKVEVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSLKKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKIMDSSR

Homology

[Close]

BLAST of Pay0012440 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12
Identity = 61/284 (21.48%), Postives = 131/284 (46.13%), Query Frame = 0


Query: 62  VIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIPV 121
           V+  L       S +  + +R+P++L    E  +   + +L   G +  EI  ++   P 
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277

Query: 122 AIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVPD 181
            +   + + I P  +Y++ +   +  A   I + P IL ++L  +V PN++IL+ F V +
Sbjct: 278 ILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRE 337

Query: 182 STISSYLQRQPKMFLTSSIRFKEIVER---VAEMGFNPQRLQFLV-AVFALRSMTKSSWD 241
           +++ S + + P++ +   ++ K   +R    + +  NP+ L  L+  +    S+++S   
Sbjct: 338 TSLPSIIAQYPEI-IGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPML 397

Query: 242 KKVEVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFA 301
           K ++   K G S ++ R      P  + L+   +  + ++F  E+      L   P+ F 
Sbjct: 398 KHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFT 457

Query: 302 YSLKKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKV 342
           Y L+  + PR   H+ ++ KG+        WM  C +  F +++
Sbjct: 458 YGLESTVKPR---HKKIIKKGI---KCSLAWMLNCSDEKFEQRM 494

[Close]

BLAST of Pay0012440 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-05
Identity = 31/131 (23.66%), Postives = 61/131 (46.56%), Query Frame = 0


Query: 65  LLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIPVAIM 124
           L ++ G S+  I  +   +PQ+LC +  KIL P   +L+  GF   +IA +V   P  ++
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILI 253

Query: 125 ASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVPDSTI 184
            S+   + P   ++  V+G   + +  +  +P      L+  V    +++K+  + D ++
Sbjct: 254 KSVKNSLQPRIRFLVQVMG---RGMDEVASYPEFFHHGLKKKVESRFKLVKKNNI-DCSL 313

Query: 185 SSYLQRQPKMF 196
              L    K F
Sbjct: 314 REMLDCNTKKF 320

[Close]

BLAST of Pay0012440 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05
Identity = 45/203 (22.17%), Postives = 94/203 (46.31%), Query Frame = 0


Query: 126 SLNKRIIPAFDYIQAVLGSKEKALAAIRR----FPGILSWDLRVSVGPNIEIL-KQFGVP 185
           SL    I +   ++ +L S   +  A+ R    FP +L+ D    + P +  L  +  + 
Sbjct: 56  SLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISIS 115

Query: 186 DSTISSYLQRQPKMFLTS-SIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKK 245
           +  I   + R P++ ++S   + +  +  +  +GF  +          L S  + +   K
Sbjct: 116 EQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPK 175

Query: 246 VEVYRK-WGLSEEEIRLAFRKNPLCMTLS-EENINDTMDFFVNEIGCESSYLARRPSLFA 305
           +E   +  G + EE+     ++P  +T S + N+   ++FF+ E+  +   L R P  F+
Sbjct: 176 IEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFS 235

Query: 306 YSLKKRILPRGYVHQVLLSKGLI 321
           +SL+++I PR   H++L   G++
Sbjct: 236 FSLERKIKPR---HRLLKEHGIL 255

[Close]

BLAST of Pay0012440 vs. ExPASy TrEMBL
Match: A0A1S3AX02 (transcription termination factor MTEF1, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 6.9e-204
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP
Sbjct: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
           VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP
Sbjct: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV
Sbjct: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI
Sbjct: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360

Query: 361 MDSSR 366
           MDSSR
Sbjct: 361 MDSSR 365

[Close]

BLAST of Pay0012440 vs. ExPASy TrEMBL
Match: A0A5A7U2J3 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00720 PE=3 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 4.6e-200
Identity = 360/365 (98.63%), Postives = 360/365 (98.63%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLF QSRGFSSPE AKLV AIP
Sbjct: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFFQSRGFSSPETAKLVRAIP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
           V IMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP
Sbjct: 121 VTIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV
Sbjct: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFC ENCFIEKVINPHKKQIPGLLELYKQKI
Sbjct: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCSENCFIEKVINPHKKQIPGLLELYKQKI 360

Query: 361 MDSSR 366
           MDSSR
Sbjct: 361 MDSSR 365

[Close]

BLAST of Pay0012440 vs. ExPASy TrEMBL
Match: A0A5A7U2M1 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00920 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.3e-154
Identity = 288/362 (79.56%), Postives = 316/362 (87.29%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           M  LFRRILLLRSPSSVFSHGFSE PLKSLR+LSTSSE+VSSPKSASLASN V LKNN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
            VIALLANHGFSQSQISDLAKR PQI  ANPE+ LLPKLLFLQS+G SSP+I K VCA P
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
             +  SLNKRIIPAFDYIQAVLG++EKA+AAI+RF GIL+ DLR+SVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DS IS+YLQ+QP+MF  SSIRFKEIVERV EMGFNP+RLQFLVAVFALRSMTKS+WDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIRLAFRKNP  M  SE+ IND MDFFVN+IGCES  +ARRP L A SL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGY++QVLLSKGLI   + F+ +F C EN FIEK INPHK+QIPGLL+LYKQK+
Sbjct: 301 KKRILPRGYIYQVLLSKGLI---KNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 359

Query: 361 MD 363
           MD
Sbjct: 361 MD 359

[Close]

BLAST of Pay0012440 vs. ExPASy TrEMBL
Match: A0A1S4DSL1 (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.4e-151
Identity = 272/365 (74.52%), Postives = 308/365 (84.38%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           M NLFRRILLLRSPSS FSHGFSE PLK LRYLSTSSEIVSSPKSASLASN VQLKNN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           A++ALLANHGFS+SQISD+ KR  +ILC NPEKIL PKLLF QS+G SSPEI KLVC+IP
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
             +  SLNKRIIP FDY+QAV GS+EK L  I+RF GIL+WDLR+SVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DS I  YLQ QP++FL + +RFKE VERV EMGFNPQ+LQF+VAVF LR+MTKS+WDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIR+AFRK+PLCM  SE+ IN  MDFFVN++GCESS+ ARRP L + SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGY++QVLLSKGLI+K+E   W F  PE  FIEK INPH +QI GLLELY++K+
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MDSSR 366
            D  R
Sbjct: 361 KDYRR 365

[Close]

BLAST of Pay0012440 vs. ExPASy TrEMBL
Match: A0A5A7U7B5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00650 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.7e-150
Identity = 273/363 (75.21%), Postives = 311/363 (85.67%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           MYNLF RI+LLR+PSSVFSHGFSE PLKSLRYLSTSSEIVSSPKS SLASN VQL+NNGK
Sbjct: 1   MYNLFHRIILLRAPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSVSLASNVVQLENNGK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AV ALLANHGFS+SQ S+LAKR+P+IL A PEK LLPKLLF QS+G SSPE+AKLVC+ P
Sbjct: 61  AVRALLANHGFSESQFSNLAKRYPRILSAKPEKTLLPKLLFFQSKGLSSPEVAKLVCSCP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
             +  +LNKRIIPAFDY+QA+LGS+EK LAAI+RF GIL+WDLR+SV PNIEILKQ GVP
Sbjct: 121 YIVKVNLNKRIIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DS I  YLQ QP+ FLT+SIRFKE VERV EMGFNPQ+LQF++AV  LR+MTKS+WDKKV
Sbjct: 181 DSNILKYLQGQPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEI LAFR++P CM LSE+ IN  MDFFVN++GCESS+ A RP + + SL
Sbjct: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGYV+QVLLSKGLI+KY      F   E  FIEK+INPHK+QIPGLLELYKQK 
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKS 360

Query: 361 MDS 364
           M+S
Sbjct: 361 MNS 363

[Close]

BLAST of Pay0012440 vs. NCBI nr
Match: XP_008438839.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic-like isoform X1 [Cucumis melo] >XP_008438840.1 PREDICTED: transcription termination factor MTEF1, chloroplastic-like isoform X1 [Cucumis melo] >XP_016899001.1 PREDICTED: transcription termination factor MTEF1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 719.5 bits (1856), Expect = 1.4e-203
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP
Sbjct: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
           VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP
Sbjct: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV
Sbjct: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI
Sbjct: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360

Query: 361 MDSSR 366
           MDSSR
Sbjct: 361 MDSSR 365

[Close]

BLAST of Pay0012440 vs. NCBI nr
Match: KAA0049468.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16147.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 706.8 bits (1823), Expect = 9.5e-200
Identity = 360/365 (98.63%), Postives = 360/365 (98.63%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLF QSRGFSSPE AKLV AIP
Sbjct: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFFQSRGFSSPETAKLVRAIP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
           V IMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP
Sbjct: 121 VTIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV
Sbjct: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFC ENCFIEKVINPHKKQIPGLLELYKQKI
Sbjct: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCSENCFIEKVINPHKKQIPGLLELYKQKI 360

Query: 361 MDSSR 366
           MDSSR
Sbjct: 361 MDSSR 365

[Close]

BLAST of Pay0012440 vs. NCBI nr
Match: KAA0049484.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 555.8 bits (1431), Expect = 2.7e-154
Identity = 288/362 (79.56%), Postives = 316/362 (87.29%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           M  LFRRILLLRSPSSVFSHGFSE PLKSLR+LSTSSE+VSSPKSASLASN V LKNN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
            VIALLANHGFSQSQISDLAKR PQI  ANPE+ LLPKLLFLQS+G SSP+I K VCA P
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
             +  SLNKRIIPAFDYIQAVLG++EKA+AAI+RF GIL+ DLR+SVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DS IS+YLQ+QP+MF  SSIRFKEIVERV EMGFNP+RLQFLVAVFALRSMTKS+WDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPERLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIRLAFRKNP  M  SE+ IND MDFFVN+IGCES  +ARRP L A SL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKNPWGMRASEDKINDVMDFFVNKIGCESFLVARRPVLIALSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGY++QVLLSKGLI   + F+ +F C EN FIEK INPHK+QIPGLL+LYKQK+
Sbjct: 301 KKRILPRGYIYQVLLSKGLI---KNFSSLFHCSENRFIEKFINPHKEQIPGLLDLYKQKL 359

Query: 361 MD 363
           MD
Sbjct: 361 MD 359

[Close]

BLAST of Pay0012440 vs. NCBI nr
Match: XP_031738239.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KAE8650392.1 hypothetical protein Csa_010055 [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 4.6e-154
Identity = 280/362 (77.35%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           M N FR ILLLRSPSS+FSHGFS++P KSLRYLSTSSEIVSSPKSASL SN VQL NN K
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AVI LLANHGFS+SQISDLAKR+PQI+  NPEKIL PKLLF QS+G SSPEI KLVC++P
Sbjct: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
             +  SLNKRIIP+FDYIQAVLGS+EK L AI+RFPGIL WDLR SVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DS ISSYLQRQPKMFLTSSIRFK+ VERV EMGFNPQRLQF+VAVFALRSMTKS+WD+KV
Sbjct: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           E YRKWGLSEEEIRLAFRKNP CM+ SE+ IN  MDFFVN++GCE   +AR P+L +YSL
Sbjct: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRILPRGYV+QVL+SK LI+KY  F   F    N FI+K INPHK+QIP LLELYK+K+
Sbjct: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360

Query: 361 MD 363
           MD
Sbjct: 361 MD 362

[Close]

BLAST of Pay0012440 vs. NCBI nr
Match: XP_031738238.1 (uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus] >KAE8650390.1 hypothetical protein Csa_009998 [Cucumis sativus])

HSP 1 Score: 548.9 bits (1413), Expect = 3.3e-152
Identity = 276/362 (76.24%), Postives = 309/362 (85.36%), Query Frame = 0


Query: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60
           M N+FR ILLLRSPSS FSHGFS++PLKSLRYL TSSEIVSSPKSASL SN VQL NN K
Sbjct: 1   MSNVFRTILLLRSPSSAFSHGFSDSPLKSLRYLCTSSEIVSSPKSASLPSNPVQLNNNSK 60

Query: 61  AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIP 120
           AVI LLANHGFS+SQISDLAKR+P+I   N EKIL PKLLF QS+G SSPEI K VC++P
Sbjct: 61  AVIGLLANHGFSESQISDLAKRYPKIFSMNTEKILSPKLLFFQSKGLSSPEIVKFVCSVP 120

Query: 121 VAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGILSWDLRVSVGPNIEILKQFGVP 180
             +  SLNKRIIP+FDYIQAVLGS+EK L AI+RFPGIL WDLR SVGPNIEILKQ GVP
Sbjct: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180

Query: 181 DSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALRSMTKSSWDKKV 240
           DS ISSYLQRQPKMFLTSSIRFKE VERV EMGFNPQRLQF+VAVFALRSMTKS+WDKK+
Sbjct: 181 DSNISSYLQRQPKMFLTSSIRFKEAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDKKL 240

Query: 241 EVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSL 300
           EVYRKWGLSEEEIR +FRKNP  M  SE+ IND M FFVN+IGCE  ++ARRP L + SL
Sbjct: 241 EVYRKWGLSEEEIRFSFRKNPWGMRASEDKINDVMGFFVNKIGCEPFFVARRPLLISLSL 300

Query: 301 KKRILPRGYVHQVLLSKGLIEKYEKFTWMFFCPENCFIEKVINPHKKQIPGLLELYKQKI 360
           KKRI+PRGYV+Q L+SKGL++K+  FT +F   E  FIEK I+PHK+QIPGLLELY+QK+
Sbjct: 301 KKRIIPRGYVYQALVSKGLVKKHANFTTLFNSSEKRFIEKYISPHKEQIPGLLELYEQKL 360

Query: 361 MD 363
           MD
Sbjct: 361 MD 362

[Close]

BLAST of Pay0012440 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-60
Identity = 128/331 (38.67%), Postives = 203/331 (61.33%), Query Frame = 0


Query: 29  SLRYLSTSSEIVSSPKSASLASNDVQLKN--NGKAVIALLANHGFSQSQISDLAKRWPQI 88
           +L YL  S  +  SP SA++AS  + L +      V+ LL +HGF+ +QIS L K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LCANPEKILLPKLLFLQSRGFSSPEIAKLVCAIPVAIMASLNKRIIPAFDYIQAVLGSKE 148
           L AN E +LLPKL F  S G S   +A+ + + P  +  SL  ++IP+++++++VL S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KALAAIRRFPGILSWDLRVSVGPNIEILKQFGVPDSTISSYLQRQPKMFLTSSIRFKEIV 208
           K +AA+RR   +   D   ++ PNI  + + GVP+  I   L   P+  +  +  F+ I 
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVAEMGFNPQRLQFLVAVFALRSM-TKSSWDKKVEVYRKWGLSEEEIRLAFRKNPLCMT 268
           ++  EMGFNPQ+  F++A+ AL     KS WDK  EVY++WG SE++I  AF+K+P CM 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 LSEENINDTMDFFVNEIGCESSYLARRPSLFAYSLKKRILPRGYVHQVLLSKGLIEKYEK 328
           LSE  IN TM++FVNE+      +A+ P +  +SL+KRI+PR  V +VL+S GL+++   
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 FTWMFFCPENCFIEKVINPHKKQIPGLLELY 357
            T +    E  F+EK++  +++++P L+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of Pay0012440 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-48
Identity = 102/318 (32.08%), Postives = 195/318 (61.32%), Query Frame = 0


Query: 42  SPKSASLASNDVQLKNNGK--AVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKL 101
           S +SA   S  V+L ++ K  +V+AL  +HGF+  QI+ + K +P++L  +PE ++ PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFLQSRGFSSPEIAKLVCAIPVAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPGIL 161
           +F  S GFS+ + AK++ + P  +  SL+KR+IP +D ++++L  +E  +  ++R  GI 
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 SWDLRVS--VGPNIEILKQFGVPDSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQ 221
            + L+++  V   + I ++ GVPD +I   +Q  P  F +   RF E++ RV   GF+P+
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 RLQFLVAVFALRSMTKSSWDKKVEVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDF 281
           +  F+ A+ A    ++S+ ++K ++++ +G S+E+   A  + P C+T+S+E I  T+++
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNEIGCESSYLARRPSLFAYSLKKRILPRGYVHQVLLSKGLIEKYE-KFTWMFFCPENC 341
            VN IG ++  +  RP + + S++KRI PR  V  +LLSKGL++K +  +  +     + 
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

Query: 342 FIEKVINPHKKQIPGLLE 355
           F++K +  ++ ++P L++
Sbjct: 369 FMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of Pay0012440 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-38
Identity = 96/308 (31.17%), Postives = 170/308 (55.19%), Query Frame = 0


Query: 43  PKSASLASNDVQLKN--NGKAVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLL 102
           P + ++A     LK+    ++VI +L ++ FS +QI    +  P+++  N EKIL PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FLQSRGFSSPEIAKLVCAIPVAIMASLNKRIIPAFDYIQAVLGSKEKALAAIRRFPG--I 162
           F +  GF+   + K V      +  SL K++IP  + +++++  K + L  I    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LSWDLRVSVGPNIEILKQFGVPDSTISSYLQRQPKMFLTSSIRFKEIVERVAEMGFNPQR 222
           LS D  + + PNI  L+  G+  S ++S L+RQP++F  S  + +  V R  ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFLVAVFALRSMTKSSWDKKVEVYRKWGLSEEEIRLAFRKNPLCMTLSEENINDTMDFF 282
              + AV +L S+++ ++D+KV+++   G SE+EI    R++P  +  SE+ +    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNEIGCESSYLARRPSLFAYSLKKRILPRGYVHQVLLSKGLIEKYEK----FTWMFFCPE 342
           +  +G E   LA+RP + +Y+L+KR++PR  V Q+L  KGL+ K EK       +    E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

[Close]

BLAST of Pay0012440 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 149.1 bits (375), Expect = 7.1e-36
Identity = 103/346 (29.77%), Postives = 175/346 (50.58%), Query Frame = 0


Query: 56  KNNGKAVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKL 115
           KNN  +V+ LL +HGF+ SQIS + + +PQ+L A+ EK L PKL FLQSRG SS EI ++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCAIPVAIMASLNKRIIPAFDYIQAVLGSK----EKALAAIRRFPGILSWDLRVSVGPNI 175
           V ++P  +    +K I   +D+I+  L  K    EK   ++ +  G L   +R     N+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NV 200

Query: 176 EILKQFGVPDSTISSYL--QRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALR 235
            +L++ G+P   + S L    QP   +    +F+E +++V EMGF+P   +F+ A+  + 
Sbjct: 201 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 260

Query: 236 SMTKSSWDKKVEVY--------------RKW---------------------GLSEEEIR 295
            M + + ++KV +Y              +KW                     G S +E  
Sbjct: 261 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 320

Query: 296 LAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSLKKRILPRGYVHQVL 355
              +  P C+ LS E +    +F V ++      +   P++F YSL+KRI+PRG V + L
Sbjct: 321 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 380

Query: 356 LSKGLI-EKYEKFTWMFFCPENCFIEKVINPH--KKQIPGLLELYK 358
           +SKGL+  +    + +  C +  F+ + +  H  K+ +  L+ +Y+
Sbjct: 381 MSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

[Close]

BLAST of Pay0012440 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 149.1 bits (375), Expect = 7.1e-36
Identity = 103/346 (29.77%), Postives = 175/346 (50.58%), Query Frame = 0


Query: 56  KNNGKAVIALLANHGFSQSQISDLAKRWPQILCANPEKILLPKLLFLQSRGFSSPEIAKL 115
           KNN  +V+ LL +HGF+ SQIS + + +PQ+L A+ EK L PKL FLQSRG SS EI ++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCAIPVAIMASLNKRIIPAFDYIQAVLGSK----EKALAAIRRFPGILSWDLRVSVGPNI 175
           V ++P  +    +K I   +D+I+  L  K    EK   ++ +  G L   +R     N+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NV 200

Query: 176 EILKQFGVPDSTISSYL--QRQPKMFLTSSIRFKEIVERVAEMGFNPQRLQFLVAVFALR 235
            +L++ G+P   + S L    QP   +    +F+E +++V EMGF+P   +F+ A+  + 
Sbjct: 201 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 260

Query: 236 SMTKSSWDKKVEVY--------------RKW---------------------GLSEEEIR 295
            M + + ++KV +Y              +KW                     G S +E  
Sbjct: 261 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 320

Query: 296 LAFRKNPLCMTLSEENINDTMDFFVNEIGCESSYLARRPSLFAYSLKKRILPRGYVHQVL 355
              +  P C+ LS E +    +F V ++      +   P++F YSL+KRI+PRG V + L
Sbjct: 321 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 380

Query: 356 LSKGLI-EKYEKFTWMFFCPENCFIEKVINPH--KKQIPGLLELYK 358
           +SKGL+  +    + +  C +  F+ + +  H  K+ +  L+ +Y+
Sbjct: 381 MSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYR 416

The following BLAST results are available for this feature:

BLAST of Pay0012440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	4.1e-12	21.48	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.3e-05	23.66	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q84X53	2.2e-05	22.17	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of Pay0012440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AX02	6.9e-204	100.00	transcription termination factor MTEF1, chloroplastic-like isoform X1 OS=Cucumis...	[more]
A0A5A7U2J3	4.6e-200	98.63	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7U2M1	1.3e-154	79.56	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSL1	1.4e-151	74.52	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
A0A5A7U7B5	5.7e-150	75.21	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Pay0012440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438839.1	1.4e-203	100.00	PREDICTED: transcription termination factor MTEF1, chloroplastic-like isoform X1...	[more]
KAA0049468.1	9.5e-200	98.63	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16147.1 tr...	[more]
KAA0049484.1	2.7e-154	79.56	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16164.1 tr...	[more]
XP_031738239.1	4.6e-154	77.35	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]
XP_031738238.1	3.3e-152	76.24	uncharacterized protein LOC101209993 isoform X1 [Cucumis sativus] >KAE8650390.1 ...	[more]

BLAST of Pay0012440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.9e-60	38.67	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.3e-48	32.08	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.0e-38	31.17	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	7.1e-36	29.77	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	7.1e-36	29.77	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 149..180 e-value: 140.0 score: 10.5 coord: 254..285 e-value: 0.032 score: 23.4 coord: 77..108 e-value: 0.0018 score: 27.6 coord: 286..320 e-value: 6.3 score: 15.8 coord: 113..145 e-value: 110.0 score: 11.4 coord: 185..215 e-value: 1000.0 score: 3.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..222 e-value: 1.9E-20 score: 73.0 coord: 159..337 e-value: 3.6E-21 score: 75.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 38..361
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 120..349 e-value: 4.4E-49 score: 169.0
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 38..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0012440.1	Pay0012440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding