Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTATATATGAGGTTACAGTCTCCTCGACATCCTGCTTTTTTTACTGTCAGCTTCTGGTGTTTGTTCATGATAGACGATGCAACTCTATCATGACGTCCTCCTGTTTCTTAGGGTTTGTTCATGATAGACGATGCAACTCTACCATGACGCCATCTTGTTTCTTAGGGTTTGTTCATGATAGACGATACAACTCTATCATGACACCCTTCTCCATCACTTTGCTTTCATATATTCTTTGTTCCAAGACCATGTCATCAGCACTAACTTGCTTTTGTGATTTTATTTTGCAGAACGATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
mRNA sequence
ATGCAAGTATATATGAGAACGATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
Coding sequence (CDS)
ATGCAAGTATATATGAGAACGATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
Protein sequence
MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Homology
BLAST of Pay0012417 vs. ExPASy TrEMBL
Match:
A0A1S3B4Q9 (uncharacterized protein LOC103486002 OS=Cucumis melo OX=3656 GN=LOC103486002 PE=4 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 1.3e-90
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSI 60
MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSI
Sbjct: 1 MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSI 60
Query: 61 LPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT 120
LPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT
Sbjct: 61 LPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT 120
Query: 121 DCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
DCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 121 DCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 159
BLAST of Pay0012417 vs. ExPASy TrEMBL
Match:
A0A5D3DTH1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00330 PE=4 SV=1)
HSP 1 Score: 331.6 bits (849), Expect = 1.8e-87
Identity = 153/156 (98.08%), Postives = 155/156 (99.36%), Query Frame = 0
Query: 4 YMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPR 63
++ TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPR
Sbjct: 24 FLGTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPR 83
Query: 64 LSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCY 123
LSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCY
Sbjct: 84 LSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCY 143
Query: 124 WEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
WEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 144 WEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 179
BLAST of Pay0012417 vs. ExPASy TrEMBL
Match:
A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70
Identity = 125/152 (82.24%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
M+YFTERFL GVRHLV+ DRNQ REDGLSL++EKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
IPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRWGTMTKVP EFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120
Query: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
ELVVGRN RLLYS LY VTT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSD 152
BLAST of Pay0012417 vs. ExPASy TrEMBL
Match:
A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 9.7e-70
Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
IPL EGK+AW+LQSSIH+E PNS R LTLGQ LIEGQTRWGT+TKVPREFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120
Query: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
ELVVGRN RLLYS LY VT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSD 152
BLAST of Pay0012417 vs. ExPASy TrEMBL
Match:
A0A5A7TZN9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001160 PE=4 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 125/153 (81.70%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 7 TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSV 66
TM+YFTERFL GVRHL++ DRNQ REDGLSL+VEK W G+FADHWP LDN+S+LPRLSV
Sbjct: 16 TMVYFTERFLSGVRHLIILSDRNQPREDGLSLIVEKSWAGAFADHWPHLDNNSVLPRLSV 75
Query: 67 EIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEW 126
EIPL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRWGTMTKVP EFCFTDCYWEW
Sbjct: 76 EIPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEW 135
Query: 127 LELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
LELVVGRN RLLYS LY VVT YTYDRNSD
Sbjct: 136 LELVVGRNTRLLYSTRLYGVVTASLYTYDRNSD 168
BLAST of Pay0012417 vs. NCBI nr
Match:
XP_008442010.1 (PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo])
HSP 1 Score: 342.0 bits (876), Expect = 2.7e-90
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSI 60
MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSI
Sbjct: 1 MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSI 60
Query: 61 LPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT 120
LPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT
Sbjct: 61 LPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFT 120
Query: 121 DCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
DCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 121 DCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 159
BLAST of Pay0012417 vs. NCBI nr
Match:
KAA0041757.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27047.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 331.6 bits (849), Expect = 3.6e-87
Identity = 153/156 (98.08%), Postives = 155/156 (99.36%), Query Frame = 0
Query: 4 YMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPR 63
++ TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPR
Sbjct: 24 FLGTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPR 83
Query: 64 LSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCY 123
LSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCY
Sbjct: 84 LSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCY 143
Query: 124 WEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
WEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Sbjct: 144 WEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 179
BLAST of Pay0012417 vs. NCBI nr
Match:
KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])
HSP 1 Score: 274.2 bits (700), Expect = 6.9e-70
Identity = 125/152 (82.24%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
M+YFTERFL GVRHLV+ DRNQ REDGLSL++EKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
IPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRWGTMTKVP EFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120
Query: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
ELVVGRN RLLYS LY VTT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSD 152
BLAST of Pay0012417 vs. NCBI nr
Match:
KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
IPL EGK+AW+LQSSIH+E PNS R LTLGQ LIEGQTRWGT+TKVPREFCFTDCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120
Query: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
ELVVGRN RLLYS LY VT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSD 152
BLAST of Pay0012417 vs. NCBI nr
Match:
KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])
HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 124/152 (81.58%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 8 MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVE 67
M+YFTERFL GVRHLV+ DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 68 IPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREFCFTDCYWEWL 127
+PL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRWGT+TKVP EFCFTDCYWEWL
Sbjct: 61 VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120
Query: 128 ELVVGRNARLLYSACLYDVVTTYFYTYDRNSD 160
ELVVGRN RLLYS LY VT YTYDRNSD
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSD 152
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3B4Q9 | 1.3e-90 | 100.00 | uncharacterized protein LOC103486002 OS=Cucumis melo OX=3656 GN=LOC103486002 PE=... | [more] |
| A0A5D3DTH1 | 1.8e-87 | 98.08 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
| A0A5A7U8L3 | 3.3e-70 | 82.24 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7VHW8 | 9.7e-70 | 81.58 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7TZN9 | 1.6e-69 | 81.70 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008442010.1 | 2.7e-90 | 100.00 | PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo] | [more] |
| KAA0041757.1 | 3.6e-87 | 98.08 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27047.1 putative m... | [more] |
| KAA0050516.1 | 6.9e-70 | 82.24 | hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa] | [more] |
| KAA0065375.1 | 2.0e-69 | 81.58 | hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa] | [more] |
| KAA0047478.1 | 3.4e-69 | 81.58 | hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
