Pay0012305 (gene) Melon (Payzawat) v1

Overview
NamePay0012305
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr08: 15721099 .. 15722199 (-)
RNA-Seq ExpressionPay0012305
SyntenyPay0012305
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTCCTTCTCTCTTCTTCCTTCTTCCTTTCTCGGAATCCCCGTTTCTTCCTCCTCCTGATTCTCTGGTCACTTTCTTTTCTCTTTTTTTCTTCCATTGTTGATGCCATTACTTCTTTTTTCTCACTTTTCTGTGTTTCCCTTTTTGACTCAGGACATTGCAAGGGAATTCAGATGCTGTACTGCTGCTGCTCCTGCTGCGTCCGATTCTGTTTTTGTTCTGGTGCTTAGATCTCATTTGCTTCTTTTGCTTTGCTTTTTCTTTCCCAGCTTTATTCCCTCTTTTTCTTTTTCTTTGGGTTTATCTTTTACTGCTCTCTAGATTTGGTTTCCAACTTCCTCTTCTTTTGTTTCTAATGACCTTCGACTTCGCTTTGGAACTATGGATGCTTTCTTCTTTTAACCTTTTTTACGTTCCGTTTCTTGAATCTAGCGTTTCTGTTATGCAATGTGAGATGATTATTTGTTAAAATATTTGGAAATCTCTTTTTCTCTTTAACTCTGTTTTGTTTTTTTGTTCTTGTCGGTGTAGCGAGAGACCAGGTTTGGGAGTTGTTAGATCCTTGCAATTATGTTTTCCAATTAGTTTGAGGATACAGAGTATGGAATTCCTTCTATAGCTGTAATATTCTGAATTTCTTTGTACCTTTTGAATTAATTTGAAGAGGATGGTGATTGAATGTTTGATTGCTGTAATCCTTGATTGAAGTTGGCTGCTGTTTCTGACTTTGAGATTATGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGCTTTCAATTTTCGAAGGAGCCGAGTCAGAATTCAGCATTTTGTTTCAATTTGAATTTTCCAGATTCAAAAATCTAAAGATGACCTTGTAGTTGTTTGCCGTTTTCTTTCTACAGTTTCATAAGAGGGGTCTTTTTTTTTTTTTTTTGGTTCATAAATTTTTAATTATCATTGCTATTTGATTTGTATGGGAAATAATAGTTCAATGTTGATGCTTCAATCATGTTGCTAGCATGGCTTCGTTTTCCAATTTACTATCCTGTGGCTACGTATTACTGTTGCTCATTGATTTTTATTTTAATTGCAGGTTTTAAGATAG

mRNA sequence

ATGTTTCCTCCTTCTCTCTTCTTCCTTCTTCCTTTCTCGGAATCCCCGTTTCTTCCTCCTCCTGATTCTCTGGACATTGCAAGGGAATTCAGATGCTGTACTGCTGCTGCTCCTGCTGCGTCCGATTCTGTTTTTGTTCTGGTTTTAAGATAG

Coding sequence (CDS)

ATGTTTCCTCCTTCTCTCTTCTTCCTTCTTCCTTTCTCGGAATCCCCGTTTCTTCCTCCTCCTGATTCTCTGGACATTGCAAGGGAATTCAGATGCTGTACTGCTGCTGCTCCTGCTGCGTCCGATTCTGTTTTTGTTCTGGTTTTAAGATAG

Protein sequence

MFPPSLFFLLPFSESPFLPPPDSLDIAREFRCCTAAAPAASDSVFVLVLR
Homology
[Close]
BLAST of Pay0012305 vs. ExPASy TrEMBL
Match: A0A0A0L432 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572850 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11
Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 1  MFPPSLFFLLPFSESPFLPPPDSLDIAREFRCCTAAAPAASDSVFVL 48
          MFPPSLFFLLPFSESPFLPPPDSLDIA EFRC T  A AAS SVFVL
Sbjct: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPA-AASHSVFVL 46

[Close]
BLAST of Pay0012305 vs. NCBI nr
Match: KGN54891.1 (hypothetical protein Csa_012629 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 8.6e-11
Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 1  MFPPSLFFLLPFSESPFLPPPDSLDIAREFRCCTAAAPAASDSVFVL 48
          MFPPSLFFLLPFSESPFLPPPDSLDIA EFRC T  A AAS SVFVL
Sbjct: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPA-AASHSVFVL 46

The following BLAST results are available for this feature:
BLAST of Pay0012305 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0012305 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4324.2e-1187.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572850 PE=4 SV=1[more]
BLAST of Pay0012305 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54891.18.6e-1187.23hypothetical protein Csa_012629 [Cucumis sativus][more]
BLAST of Pay0012305 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0012305.1Pay0012305.1mRNA