Pay0012053 (gene) Melon (Payzawat) v1

Overview
NamePay0012053
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationchr07: 19966786 .. 19968021 (-)
RNA-Seq ExpressionPay0012053
SyntenyPay0012053
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAATAAGGCTGCATCAAAATCTTCTGTTGCAAGTGACTCTTACATTGGACTTGTCACCCAAAGTCACTTGAAGAGAAGCATGCAAGAACAAGAACAAGGTTTTTTCCTCAAGAAGAAAAGTTTGGAACAACTGATAGAATCTCCTAAAGGCGGGATCATCATCAAAGATAATCCTTTGTTCAACAACTCTACGCCTGTTTCTAATCTATCAGACAAAGAATCACACCTTGAAGAAGTGTCTGTCATGATGGTAGATGTAACAGCTGAGGCAACCATGGTAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAGCGAGATCATGAAATTGCCGCCTTAAAAAATCAAATGAAGGCTTGTGAAACTGCTGAGTCAAGTCAAACTCTTGTTGTCAAAGCTACTGATAAAGGGAAGAATGTAGTGCAGGAAAACCAACCACAACAAAAATCAGTCTCTGTTGCTTCTCCCTCAGTTCAGCAACTACAGGATATGATCGCGAATTCCATTAGAGCTTAGTATGGAGCACCACCACAAACTTCTTTCATGTATTCTAAGCCGTACACTAAGAGAATCAACAACTTGAGAATTCCACTTGGGTACCAACCTCCAAAATTCCAGCAATTCGATGGAAAGGGCAACCCAAAGCAGCATATCGCTCACTTTGTCGAAACATGCAAAAATGCAGGATCAAGAGGAGACCAACTAGTCAGGCAGTTCGTTCGAAGCTTAAAAGGAAATGCTTTCGAGTGGTATACTGATCTAGAGCCAGAAGTAATTGATAGCTGGGAGCAACTGAAAATAGAGTTTCTCAACCGCTTTTATAGCACTAGGCGTGTCGTCATGATGGAGTTAACAAATATAGAACAGCGGAAGAGAGAGCCAGTCATCGACTATATAAACCGATGGAGAGCTCTAAGCCTGGATTGCAAAGACAAGCTCACAGAACTGTCTGCAATAGAGATGTGCACCCAAGGTATGCACTGGGAACTTCTCTATATTTTACAGGGAATAAAACCTCGCACATTTGAAGAATTGGCAACACGCGCCCATGATATGGAGTTGAGTATAGCCAACAGAGGAGCAAAAGATTTCTTGGTTCAAAGAACAAGGAGTGACAAGAATGAAATCAATGACACTAAAAAGATTGCAAATAATGTCCTAAACGAGTCTATGCTTGTTCAAAAGACTCCATTGAAATCTTTCTCTAAAAGAAAATAA

mRNA sequence

ATGGCAACAAATAAGGCTGCATCAAAATCTTCTGTTGCAAGTGACTCTTACATTGGACTTGTCACCCAAAGTCACTTGAAGAGAAGCATGCAAGAACAAGAACAAGGTTTTTTCCTCAAGAAGAAAAGTTTGGAACAACTGATAGAATCTCCTAAAGGCGGGATCATCATCAAAGATAATCCTTTGTTCAACAACTCTACGCCTGTTTCTAATCTATCAGACAAAGAATCACACCTTGAAGAAGTGTCTGTCATGATGGTAGATGTAACAGCTGAGGCAACCATGGTAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAGCGAGATCATGAAATTGCCGCCTTAAAAAATCAAATGAAGGCTTGTGAAACTGCTGAGTCAAGTCAAACTCTTGTTGTCAAAGCTACTGATAAAGGGAAGAATTATGGAGCACCACCACAAACTTCTTTCATGTATTCTAAGCCGTACACTAAGAGAATCAACAACTTGAGAATTCCACTTGGGTACCAACCTCCAAAATTCCAGCAATTCGATGGAAAGGGCAACCCAAAGCAGCATATCGCTCACTTTGTCGAAACATGCAAAAATGCAGGATCAAGAGGAGACCAACTAGTCAGGCAGTTCGTTCGAAGCTTAAAAGGAAATGCTTTCGAGTGGTATACTGATCTAGAGCCAGAAGTAATTGATAGCTGGGAGCAACTGAAAATAGAGTTTCTCAACCGCTTTTATAGCACTAGGCGTGTCGTCATGATGGAGTTAACAAATATAGAACAGCGGAAGAGAGAGCCAGTCATCGACTATATAAACCGATGGAGAGCTCTAAGCCTGGATTGCAAAGACAAGCTCACAGAACTGTCTGCAATAGAGATGTGCACCCAAGGTATGCACTGGGAACTTCTCTATATTTTACAGGGAATAAAACCTCGCACATTTGAAGAATTGGCAACACGCGCCCATGATATGGAGTTGAGTATAGCCAACAGAGGAGCAAAAGATTTCTTGGTTCAAAGAACAAGGAGTGACAAGAATGAAATCAATGACACTAAAAAGATTGCAAATAATGTCCTAAACGAGTCTATGCTTGTTCAAAAGACTCCATTGAAATCTTTCTCTAAAAGAAAATAA

Coding sequence (CDS)

ATGGCAACAAATAAGGCTGCATCAAAATCTTCTGTTGCAAGTGACTCTTACATTGGACTTGTCACCCAAAGTCACTTGAAGAGAAGCATGCAAGAACAAGAACAAGGTTTTTTCCTCAAGAAGAAAAGTTTGGAACAACTGATAGAATCTCCTAAAGGCGGGATCATCATCAAAGATAATCCTTTGTTCAACAACTCTACGCCTGTTTCTAATCTATCAGACAAAGAATCACACCTTGAAGAAGTGTCTGTCATGATGGTAGATGTAACAGCTGAGGCAACCATGGTAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAGCGAGATCATGAAATTGCCGCCTTAAAAAATCAAATGAAGGCTTGTGAAACTGCTGAGTCAAGTCAAACTCTTGTTGTCAAAGCTACTGATAAAGGGAAGAATTATGGAGCACCACCACAAACTTCTTTCATGTATTCTAAGCCGTACACTAAGAGAATCAACAACTTGAGAATTCCACTTGGGTACCAACCTCCAAAATTCCAGCAATTCGATGGAAAGGGCAACCCAAAGCAGCATATCGCTCACTTTGTCGAAACATGCAAAAATGCAGGATCAAGAGGAGACCAACTAGTCAGGCAGTTCGTTCGAAGCTTAAAAGGAAATGCTTTCGAGTGGTATACTGATCTAGAGCCAGAAGTAATTGATAGCTGGGAGCAACTGAAAATAGAGTTTCTCAACCGCTTTTATAGCACTAGGCGTGTCGTCATGATGGAGTTAACAAATATAGAACAGCGGAAGAGAGAGCCAGTCATCGACTATATAAACCGATGGAGAGCTCTAAGCCTGGATTGCAAAGACAAGCTCACAGAACTGTCTGCAATAGAGATGTGCACCCAAGGTATGCACTGGGAACTTCTCTATATTTTACAGGGAATAAAACCTCGCACATTTGAAGAATTGGCAACACGCGCCCATGATATGGAGTTGAGTATAGCCAACAGAGGAGCAAAAGATTTCTTGGTTCAAAGAACAAGGAGTGACAAGAATGAAATCAATGACACTAAAAAGATTGCAAATAATGTCCTAAACGAGTCTATGCTTGTTCAAAAGACTCCATTGAAATCTTTCTCTAAAAGAAAATAA

Protein sequence

MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDNPLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALKNQMKACETAESSQTLVVKATDKGKNYGAPPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVVMMELTNIEQRKREPVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK
Homology
BLAST of Pay0012053 vs. ExPASy TrEMBL
Match: A0A5A7SXL9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G001290 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.4e-189
Identity = 351/414 (84.78%), Postives = 367/414 (88.65%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSM--QEQEQGFFLKKKSLEQLIESPKGGIIIK 60
           MATNKAASKSSVASDSYIGLVTQSHLKRSM  QEQEQGF LKKKSLEQLIESPKGGIII+
Sbjct: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIR 60

Query: 61  DNPLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAA 120
           DNPLFNNSTP SNLSDK SHLE VSVMMVDVTAEAT+ EMERKINFLMKV+EERDHEIAA
Sbjct: 61  DNPLFNNSTPASNLSDKASHLEVVSVMMVDVTAEATVTEMERKINFLMKVIEERDHEIAA 120

Query: 121 LKNQMKACETAESSQTLVVKATDKGKN--------------------------------- 180
           LK+QMKACET ESSQT VVKATDKGKN                                 
Sbjct: 121 LKDQMKACETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQ 180

Query: 181 YGAPPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRG 240
           YG PPQTSFMYSK YTKRI+NLR+PLGYQPPKFQQFDG+GNPKQHIAHFVETC+NAGSRG
Sbjct: 181 YGGPPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRG 240

Query: 241 DQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRK 300
           DQLV+QFVRSLKGNAFEWYTDLEPEVID+WEQL+IEFLNRFYSTRRVV MMELTN +QRK
Sbjct: 241 DQLVKQFVRSLKGNAFEWYTDLEPEVIDNWEQLEIEFLNRFYSTRRVVSMMELTNTKQRK 300

Query: 301 REPVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHD 360
            EPVIDYINRWRALSLDCKDKLTELSA+EMCTQGMHWELLYILQGIKPRTFEELATRAHD
Sbjct: 301 GEPVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHD 360

Query: 361 MELSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           MELSIAN+GAKDFLVQRTRSD+NEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 MELSIANKGAKDFLVQRTRSDRNEINDTKKIANNVLNESMLVQETPLKSFSKRK 414

BLAST of Pay0012053 vs. ExPASy TrEMBL
Match: E5GCP6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.4e-189
Identity = 351/414 (84.78%), Postives = 367/414 (88.65%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSM--QEQEQGFFLKKKSLEQLIESPKGGIIIK 60
           MATNKAASKSSVASDSYIGLVTQSHLKRSM  QEQEQGF LKKKSLEQLIESPKGGIII+
Sbjct: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIR 60

Query: 61  DNPLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAA 120
           DNPLFNNSTP SNLSDK SHLE VSVMMVDVTAEAT+ EMERKINFLMKV+EERDHEIAA
Sbjct: 61  DNPLFNNSTPASNLSDKASHLEVVSVMMVDVTAEATVTEMERKINFLMKVIEERDHEIAA 120

Query: 121 LKNQMKACETAESSQTLVVKATDKGKN--------------------------------- 180
           LK+QMKACET ESSQT VVKATDKGKN                                 
Sbjct: 121 LKDQMKACETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQ 180

Query: 181 YGAPPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRG 240
           YG PPQTSFMYSK YTKRI+NLR+PLGYQPPKFQQFDG+GNPKQHIAHFVETC+NAGSRG
Sbjct: 181 YGGPPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRG 240

Query: 241 DQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRK 300
           DQLV+QFVRSLKGNAFEWYTDLEPEVID+WEQL+IEFLNRFYSTRRVV MMELTN +QRK
Sbjct: 241 DQLVKQFVRSLKGNAFEWYTDLEPEVIDNWEQLEIEFLNRFYSTRRVVSMMELTNTKQRK 300

Query: 301 REPVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHD 360
            EPVIDYINRWRALSLDCKDKLTELSA+EMCTQGMHWELLYILQGIKPRTFEELATRAHD
Sbjct: 301 GEPVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHD 360

Query: 361 MELSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           MELSIAN+GAKDFLVQRTRSD+NEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 MELSIANKGAKDFLVQRTRSDRNEINDTKKIANNVLNESMLVQETPLKSFSKRK 414

BLAST of Pay0012053 vs. ExPASy TrEMBL
Match: A0A5A7SU65 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00940 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.9e-188
Identity = 349/412 (84.71%), Postives = 364/412 (88.35%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDN 60
           MA+  AASKSS ASDSYIGLVTQSHLKRSMQEQEQGF LKKKSLEQLIESPKG III+DN
Sbjct: 1   MASKNAASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGEIIIRDN 60

Query: 61  PLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALK 120
           PLFNNSTP SNLSDKESHLE VSVMMVDVTAEATM +MERKINFLMKVVEERDHEIAALK
Sbjct: 61  PLFNNSTPASNLSDKESHLEVVSVMMVDVTAEATMAKMERKINFLMKVVEERDHEIAALK 120

Query: 121 NQMKACETAESSQTLVVKATDKGKN---------------------------------YG 180
           +QMKACETAESSQT VVKATDK KN                                 YG
Sbjct: 121 DQMKACETAESSQTPVVKATDKEKNVVQENQPQQQSVSVASLSVQQLQDMIENSIRAQYG 180

Query: 181 APPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQ 240
            PPQTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVETC+NAGSRGDQ
Sbjct: 181 GPPQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQ 240

Query: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRKRE 300
           LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQL+IEFLNRFYSTR V+ MMELTN +Q+K E
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNRFYSTRHVISMMELTNTKQQKGE 300

Query: 301 PVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDME 360
           PVIDYINRWRALSLDCKDKLTELSA+EMCTQGMHWELLYILQGIKPRTFEELATRAHD+E
Sbjct: 301 PVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDIE 360

Query: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESML+Q+TPLKSFSKRK
Sbjct: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLIQETPLKSFSKRK 412

BLAST of Pay0012053 vs. ExPASy TrEMBL
Match: A0A5D3DIN4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00020 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.5e-185
Identity = 349/412 (84.71%), Postives = 361/412 (87.62%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDN 60
           MA+ K ASKSS ASDSYIGLVTQSHLKRSMQEQEQGF LKKKSLEQLIESPKG III+DN
Sbjct: 1   MASKKVASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGRIIIRDN 60

Query: 61  PLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALK 120
           PLFNNSTP SNLSDKESHLE VSVMMVDVT EATMVEME+KINFLMKVVEERDHEIAALK
Sbjct: 61  PLFNNSTPASNLSDKESHLEVVSVMMVDVTTEATMVEMEKKINFLMKVVEERDHEIAALK 120

Query: 121 NQMKACETAESSQTLVVKATDKGKN---------------------------------YG 180
           +QMKA ETAESS+T VVKATDKGKN                                 YG
Sbjct: 121 DQMKAYETAESSKTPVVKATDKGKNVVQENQPQQQSISVASLSVQQLQDMIVNSIRAQYG 180

Query: 181 APPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQ 240
            P QTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVE C+NAGSRGDQ
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVEKCENAGSRGDQ 240

Query: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRKRE 300
           LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQL+IEFLN FYSTRRVV MMELTN +QRK E
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNCFYSTRRVVSMMELTNTKQRKGE 300

Query: 301 PVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDME 360
           PVIDYINRWRALSLDCKDKLTELSA+EMCTQGMH ELLYILQGIKPRTFEELATRAHDME
Sbjct: 301 PVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHLELLYILQGIKPRTFEELATRAHDME 360

Query: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQETPLKSFSKRK 412

BLAST of Pay0012053 vs. ExPASy TrEMBL
Match: A0A5A7TC87 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00670 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.3e-184
Identity = 347/412 (84.22%), Postives = 360/412 (87.38%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDN 60
           MA+ K ASKSS ASDSYIGLVTQSHLKRSMQEQEQGF LKKKSLEQLIESPKG III+DN
Sbjct: 1   MASKKVASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGRIIIRDN 60

Query: 61  PLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALK 120
           PLFNNSTP SNLSDKESHLE VSVMMVDVT EATMVEME+KINFLMKVVEERDHEIAALK
Sbjct: 61  PLFNNSTPASNLSDKESHLEVVSVMMVDVTTEATMVEMEKKINFLMKVVEERDHEIAALK 120

Query: 121 NQMKACETAESSQTLVVKATDKGKN---------------------------------YG 180
           +QMKA ETAESS+T VVKATDKGKN                                 YG
Sbjct: 121 DQMKAYETAESSKTPVVKATDKGKNVVQENQPQQQSISVASLSVQQLQDMIVNSIRAQYG 180

Query: 181 APPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQ 240
            P QTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVE C+N GSRGDQ
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVEKCENVGSRGDQ 240

Query: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRKRE 300
           LVR+FVRSLKGNAFEWYTDLEPEVIDSWEQL+IEFLN FYSTRRVV MMELTN +QRK E
Sbjct: 241 LVRKFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNCFYSTRRVVSMMELTNTKQRKGE 300

Query: 301 PVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDME 360
           PVIDYINRWRALSLDCKDKLTELSA+EMCTQGMH ELLYILQGIKPRTFEELATRAHDME
Sbjct: 301 PVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHLELLYILQGIKPRTFEELATRAHDME 360

Query: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQETPLKSFSKRK 412

BLAST of Pay0012053 vs. NCBI nr
Match: ADN34247.1 (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo] >KAA0033935.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 669.5 bits (1726), Expect = 1.7e-188
Identity = 351/414 (84.78%), Postives = 367/414 (88.65%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSM--QEQEQGFFLKKKSLEQLIESPKGGIIIK 60
           MATNKAASKSSVASDSYIGLVTQSHLKRSM  QEQEQGF LKKKSLEQLIESPKGGIII+
Sbjct: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIR 60

Query: 61  DNPLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAA 120
           DNPLFNNSTP SNLSDK SHLE VSVMMVDVTAEAT+ EMERKINFLMKV+EERDHEIAA
Sbjct: 61  DNPLFNNSTPASNLSDKASHLEVVSVMMVDVTAEATVTEMERKINFLMKVIEERDHEIAA 120

Query: 121 LKNQMKACETAESSQTLVVKATDKGKN--------------------------------- 180
           LK+QMKACET ESSQT VVKATDKGKN                                 
Sbjct: 121 LKDQMKACETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQ 180

Query: 181 YGAPPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRG 240
           YG PPQTSFMYSK YTKRI+NLR+PLGYQPPKFQQFDG+GNPKQHIAHFVETC+NAGSRG
Sbjct: 181 YGGPPQTSFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRG 240

Query: 241 DQLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRK 300
           DQLV+QFVRSLKGNAFEWYTDLEPEVID+WEQL+IEFLNRFYSTRRVV MMELTN +QRK
Sbjct: 241 DQLVKQFVRSLKGNAFEWYTDLEPEVIDNWEQLEIEFLNRFYSTRRVVSMMELTNTKQRK 300

Query: 301 REPVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHD 360
            EPVIDYINRWRALSLDCKDKLTELSA+EMCTQGMHWELLYILQGIKPRTFEELATRAHD
Sbjct: 301 GEPVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHD 360

Query: 361 MELSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           MELSIAN+GAKDFLVQRTRSD+NEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 MELSIANKGAKDFLVQRTRSDRNEINDTKKIANNVLNESMLVQETPLKSFSKRK 414

BLAST of Pay0012053 vs. NCBI nr
Match: KAA0033526.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ95662.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 668.3 bits (1723), Expect = 3.9e-188
Identity = 349/412 (84.71%), Postives = 364/412 (88.35%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDN 60
           MA+  AASKSS ASDSYIGLVTQSHLKRSMQEQEQGF LKKKSLEQLIESPKG III+DN
Sbjct: 1   MASKNAASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGEIIIRDN 60

Query: 61  PLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALK 120
           PLFNNSTP SNLSDKESHLE VSVMMVDVTAEATM +MERKINFLMKVVEERDHEIAALK
Sbjct: 61  PLFNNSTPASNLSDKESHLEVVSVMMVDVTAEATMAKMERKINFLMKVVEERDHEIAALK 120

Query: 121 NQMKACETAESSQTLVVKATDKGKN---------------------------------YG 180
           +QMKACETAESSQT VVKATDK KN                                 YG
Sbjct: 121 DQMKACETAESSQTPVVKATDKEKNVVQENQPQQQSVSVASLSVQQLQDMIENSIRAQYG 180

Query: 181 APPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQ 240
            PPQTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVETC+NAGSRGDQ
Sbjct: 181 GPPQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQ 240

Query: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRKRE 300
           LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQL+IEFLNRFYSTR V+ MMELTN +Q+K E
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNRFYSTRHVISMMELTNTKQQKGE 300

Query: 301 PVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDME 360
           PVIDYINRWRALSLDCKDKLTELSA+EMCTQGMHWELLYILQGIKPRTFEELATRAHD+E
Sbjct: 301 PVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDIE 360

Query: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESML+Q+TPLKSFSKRK
Sbjct: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLIQETPLKSFSKRK 412

BLAST of Pay0012053 vs. NCBI nr
Match: TYK23445.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 658.7 bits (1698), Expect = 3.1e-185
Identity = 349/412 (84.71%), Postives = 361/412 (87.62%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDN 60
           MA+ K ASKSS ASDSYIGLVTQSHLKRSMQEQEQGF LKKKSLEQLIESPKG III+DN
Sbjct: 1   MASKKVASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGRIIIRDN 60

Query: 61  PLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALK 120
           PLFNNSTP SNLSDKESHLE VSVMMVDVT EATMVEME+KINFLMKVVEERDHEIAALK
Sbjct: 61  PLFNNSTPASNLSDKESHLEVVSVMMVDVTTEATMVEMEKKINFLMKVVEERDHEIAALK 120

Query: 121 NQMKACETAESSQTLVVKATDKGKN---------------------------------YG 180
           +QMKA ETAESS+T VVKATDKGKN                                 YG
Sbjct: 121 DQMKAYETAESSKTPVVKATDKGKNVVQENQPQQQSISVASLSVQQLQDMIVNSIRAQYG 180

Query: 181 APPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQ 240
            P QTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVE C+NAGSRGDQ
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVEKCENAGSRGDQ 240

Query: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRKRE 300
           LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQL+IEFLN FYSTRRVV MMELTN +QRK E
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNCFYSTRRVVSMMELTNTKQRKGE 300

Query: 301 PVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDME 360
           PVIDYINRWRALSLDCKDKLTELSA+EMCTQGMH ELLYILQGIKPRTFEELATRAHDME
Sbjct: 301 PVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHLELLYILQGIKPRTFEELATRAHDME 360

Query: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQETPLKSFSKRK 412

BLAST of Pay0012053 vs. NCBI nr
Match: KAA0040518.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 655.6 bits (1690), Expect = 2.6e-184
Identity = 347/412 (84.22%), Postives = 360/412 (87.38%), Query Frame = 0

Query: 1   MATNKAASKSSVASDSYIGLVTQSHLKRSMQEQEQGFFLKKKSLEQLIESPKGGIIIKDN 60
           MA+ K ASKSS ASDSYIGLVTQSHLKRSMQEQEQGF LKKKSLEQLIESPKG III+DN
Sbjct: 1   MASKKVASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGRIIIRDN 60

Query: 61  PLFNNSTPVSNLSDKESHLEEVSVMMVDVTAEATMVEMERKINFLMKVVEERDHEIAALK 120
           PLFNNSTP SNLSDKESHLE VSVMMVDVT EATMVEME+KINFLMKVVEERDHEIAALK
Sbjct: 61  PLFNNSTPASNLSDKESHLEVVSVMMVDVTTEATMVEMEKKINFLMKVVEERDHEIAALK 120

Query: 121 NQMKACETAESSQTLVVKATDKGKN---------------------------------YG 180
           +QMKA ETAESS+T VVKATDKGKN                                 YG
Sbjct: 121 DQMKAYETAESSKTPVVKATDKGKNVVQENQPQQQSISVASLSVQQLQDMIVNSIRAQYG 180

Query: 181 APPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQ 240
            P QTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVE C+N GSRGDQ
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVEKCENVGSRGDQ 240

Query: 241 LVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTRRVV-MMELTNIEQRKRE 300
           LVR+FVRSLKGNAFEWYTDLEPEVIDSWEQL+IEFLN FYSTRRVV MMELTN +QRK E
Sbjct: 241 LVRKFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNCFYSTRRVVSMMELTNTKQRKGE 300

Query: 301 PVIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDME 360
           PVIDYINRWRALSLDCKDKLTELSA+EMCTQGMH ELLYILQGIKPRTFEELATRAHDME
Sbjct: 301 PVIDYINRWRALSLDCKDKLTELSAVEMCTQGMHLELLYILQGIKPRTFEELATRAHDME 360

Query: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQ+TPLKSFSKRK
Sbjct: 361 LSIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQETPLKSFSKRK 412

BLAST of Pay0012053 vs. NCBI nr
Match: ADN33709.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 617.1 bits (1590), Expect = 1.0e-172
Identity = 314/351 (89.46%), Postives = 331/351 (94.30%), Query Frame = 0

Query: 30  MQEQEQGFFLKKKSLEQLIESPKGGIIIKDNPLFNNSTPVSNLSDKESHLEEVSVMMVDV 89
           MQEQEQGF LKKKSLEQLIES KGGIII+DNPLFNNSTP SNLSDKESHLE VSVMM+DV
Sbjct: 1   MQEQEQGFVLKKKSLEQLIESLKGGIIIRDNPLFNNSTPTSNLSDKESHLEVVSVMMIDV 60

Query: 90  TAEATMVEMERKINFLMKVVEERDHEIAALKNQMKACETAESSQTLVVKATDKGKN-YGA 149
           TAEATM EME+KINFLMKVVEERDHEIAALK+QMKACE+AESSQT VVK TDKGKN YG 
Sbjct: 61  TAEATMAEMEKKINFLMKVVEERDHEIAALKDQMKACESAESSQTSVVKTTDKGKNVYGG 120

Query: 150 PPQTSFMYSKPYTKRINNLRIPLGYQPPKFQQFDGKGNPKQHIAHFVETCKNAGSRGDQL 209
           PPQTSFMYSKPYTKRI+NLR+PLGYQPPKFQQFDGKGNPKQHIAHFVETC+NAGSRGDQL
Sbjct: 121 PPQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGDQL 180

Query: 210 VRQFVRSLKGNAFEWYTDLEPEVIDSWEQLKIEFLNRFYSTR-RVVMMELTNIEQRKREP 269
           VRQFVRSLKGNAFEWYTDLEPEV DSWEQL+ EFLNRFYST+  V MMELT  +QRK + 
Sbjct: 181 VRQFVRSLKGNAFEWYTDLEPEVTDSWEQLEKEFLNRFYSTKCTVSMMELTTTKQRKGDS 240

Query: 270 VIDYINRWRALSLDCKDKLTELSAIEMCTQGMHWELLYILQGIKPRTFEELATRAHDMEL 329
           +IDYINRWRALSLDCKDKLTELSA+EMCTQGMHWELLYILQGIKPRTFEELATRAHDME 
Sbjct: 241 IIDYINRWRALSLDCKDKLTELSAVEMCTQGMHWELLYILQGIKPRTFEELATRAHDMES 300

Query: 330 SIANRGAKDFLVQRTRSDKNEINDTKKIANNVLNESMLVQKTPLKSFSKRK 379
           SIANRGAKDFLVQRTRSDKNEINDT+KIANNVLNESM+VQ+T LKSFSKRK
Sbjct: 301 SIANRGAKDFLVQRTRSDKNEINDTEKIANNVLNESMVVQETLLKSFSKRK 351

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SXL98.4e-18984.78Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
E5GCP68.4e-18984.78Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=... [more]
A0A5A7SU651.9e-18884.71Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DIN41.5e-18584.71Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TC871.3e-18484.22Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
ADN34247.11.7e-18884.78ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo] >KAA0033935.1 ty3-g... [more]
KAA0033526.13.9e-18884.71ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ95662.1 ty3-gyp... [more]
TYK23445.13.1e-18584.71ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0040518.12.6e-18484.22ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
ADN33709.11.0e-17289.46retrotransposon gag protein [Cucumis melo subsp. melo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availablePANTHERPTHR33223FAMILY NOT NAMEDcoord: 173..329
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 212..300
e-value: 3.0E-12
score: 46.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0012053.1Pay0012053.1mRNA