Pay0011961 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011961
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribosomal protein L19
Location	chr02: 21356480 .. 21357958 (-)
RNA-Seq Expression	Pay0011961
Synteny	Pay0011961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCTCTCACCCTACAAAAGCGGCTTGCCGCCAGCAGCCTTGACTGTGGCAAACGTCGAGTATGGCTTGATCCGAACGAGACCACCACCATCTCCTTGGCCAATTCAAGTAAGCACTTCAACTTTTTCTAGAAAATTGTTGCATCTTCTCTTTTCTTTTCTCTTCGTGTTAGACTTGAAGAGTCATGAAGTTTAGTTGCAAGTTCATAACCATTTAAAGAGAACAGTGAAGAAGATAGAAAAATCTATCTTAGTATAAGGCAGGTTTGATCAGTCATCACTTTGATGTTCGATGTTGAGTAATATTGATTTTAGAAAAATCTAAAAACATTTCAAATAGTGTTTTCTGTTGAGGTGCTTAATAACTAGATGCATGTTTTGAAATAATTATAATAAACGTTCTCTTACATACATATCAATCATGCATATAAAATTTTCATAATAAAACAAATAAAAAAATTAGAGAAAAATATAGTTATCACAATTATTTAGTTAAATAAGTTCTCAAATTGAACATTCTTTTTTAGACCCCATTTGATAATATTTTTGTTATTGAAAATTAAACCTATAGACACCTAACTTCCTACCTTTGCTATCTATATTATATACTACCAATTGTTTAAATAACCAAACCAAAACTTGAAACTAAAAAAAGTAACTTAAAAAAGTTATTTTTGTTTTTGAAATTTAGCTAAGAATTCAACCACATAGAGAGAATATAGACCTAGTTTTGGAAAACAAAAATAAAAAATGAAATGGTCATCACACGAGAACTTAGTAATTCGATAATTCTAAAATCGTTTTTAAAACCAAACTTAATAACTCAAGATCACTTTTAAATAAAATCACTTTGAAAGCGAACATAAATATGATTATATAAAAATCAATCGTACCATCTCTTTTTCTAAAATCATTGGTTCTACTGGATACAGATTTCACACAAGAGTGGGCAATGAAATCTTTAGTTTCAGAAAAGAAATTTGTACCTGATATTAACAATTCAAGTATAGCAAAATCGTTTCTAAAAGAATAAAAACATTTGAACTAAAGCATTTGTAACTATCAGGAATGAGCATCAGAAAGCTCATAAAAGATGGCCTAATCATCAAAAGATTGACAACAACCCACTCAAAATCTCGATCTCGACAACGCCATCAAGCAAAATCAAGAGGACGTCACTCAGGGAATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCTACAAAGCTGCTATGGATGAGAAGAATGAGAGTCCTCCGAAGATTACTGCGGAAGTACAGAGACTATGAGAAGATAGATAGGCATATTTATCATCAAATGTACATTAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTTCTAATGGAAAGCATTCACAAAGTCAAGGCCGAAAAAGCATTAGAAAAAACACTTTCTATTCAGGTGGAGGCCAAGAGAGCAATAAATAGTAAAGCTATAATAAGATTGTGA

mRNA sequence

ATGGTGTCTCTCACCCTACAAAAGCGGCTTGCCGCCAGCAGCCTTGACTGTGGCAAACGTCGAGTATGGCTTGATCCGAACGAGACCACCACCATCTCCTTGGCCAATTCAAGAATGAGCATCAGAAAGCTCATAAAAGATGGCCTAATCATCAAAAGATTGACAACAACCCACTCAAAATCTCGATCTCGACAACGCCATCAAGCAAAATCAAGAGGACGTCACTCAGGGAATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCTACAAAGCTGCTATGGATGAGAAGAATGAGAGTCCTCCGAAGATTACTGCGGAAGTACAGAGACTATGAGAAGATAGATAGGCATATTTATCATCAAATGTACATTAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTTCTAATGGAAAGCATTCACAAAGTCAAGGCCGAAAAAGCATTAGAAAAAACACTTTCTATTCAGGTGGAGGCCAAGAGAGCAATAAATAGTAAAGCTATAATAAGATTGTGA

Coding sequence (CDS)

ATGGTGTCTCTCACCCTACAAAAGCGGCTTGCCGCCAGCAGCCTTGACTGTGGCAAACGTCGAGTATGGCTTGATCCGAACGAGACCACCACCATCTCCTTGGCCAATTCAAGAATGAGCATCAGAAAGCTCATAAAAGATGGCCTAATCATCAAAAGATTGACAACAACCCACTCAAAATCTCGATCTCGACAACGCCATCAAGCAAAATCAAGAGGACGTCACTCAGGGAATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCTACAAAGCTGCTATGGATGAGAAGAATGAGAGTCCTCCGAAGATTACTGCGGAAGTACAGAGACTATGAGAAGATAGATAGGCATATTTATCATCAAATGTACATTAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTTCTAATGGAAAGCATTCACAAAGTCAAGGCCGAAAAAGCATTAGAAAAAACACTTTCTATTCAGGTGGAGGCCAAGAGAGCAATAAATAGTAAAGCTATAATAAGATTGTGA

Protein sequence

MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSKSRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIYHQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL

Homology

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BLAST of Pay0011961 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-59
Identity = 123/166 (74.10%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLA+S L CGKR+VWLDPNE + IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SR+RQ + AK +GRHSG GKR+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KIDRH+Y
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK KAEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

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BLAST of Pay0011961 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-58
Identity = 121/166 (72.89%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS + CGK +VWLDPNE++ IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SR+R+   AK +GRHSG GKR+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KID+H+Y
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAIN 167
           H MY+RVKGNV+KNKRVLMESIHK KAEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

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BLAST of Pay0011961 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.4e-57
Identity = 117/166 (70.48%), Postives = 142/166 (85.54%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL +QKRLAAS + CGK +VWLDPNE+  IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SR+R  ++AK +GRHSG GKR+GT+EARLPTK+LWMRRMRVLRR L KYR+ +KIDRH+Y
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK+KAEKA EKTL+ Q EAKR  N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKN 166

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BLAST of Pay0011961 vs. ExPASy Swiss-Prot
Match: Q90YU8 (60S ribosomal protein L19 OS=Ictalurus punctatus OX=7998 GN=rpl19 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 105/169 (62.13%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           M  L LQKRLA+S L CGK++VWLDPNET  I+ ANSR +IRKL+KDGLIIK+  T HS+
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           +R R+   A+ +GRH G GKR+GT  AR+P KL WMRRMR+LRRLLR+YR+ +KIDRH+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKA 170
           H +Y+R KGNV+KNKR+LME IHK+KA++A +K LS Q EA+R+   +A
Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSKTREA 169

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BLAST of Pay0011961 vs. ExPASy Swiss-Prot
Match: Q6P5L3 (60S ribosomal protein L19 OS=Danio rerio OX=7955 GN=rpl19 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-50
Identity = 105/169 (62.13%), Postives = 133/169 (78.70%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           M  L LQKRLA+S L CGK++VWLDPNET  I+ ANSR  IRKL+KDGLIIK+  T HS+
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           +R R+   A+ +GRH G GKR+GT  AR+P KL WMRRMR+LRRLLR+YR+ +KIDRH+Y
Sbjct: 61  ARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKA 170
           H +Y+R KGNV+KNKR+LME IHK+KA+KA +K L+ Q EA+R    +A
Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTKTREA 169

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BLAST of Pay0011961 vs. ExPASy TrEMBL
Match: A0A1S3BVU0 (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494191 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.7e-83
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVK EKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKTEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of Pay0011961 vs. ExPASy TrEMBL
Match: A0A5A7UX03 (Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004560 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDPNETTT SLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTTSLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVKAE+ALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEQALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of Pay0011961 vs. ExPASy TrEMBL
Match: A0A0A0LSW8 (Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_1G025150 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.2e-82
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKRRVWLDP+ETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKV AEKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of Pay0011961 vs. ExPASy TrEMBL
Match: A0A6J1E0X8 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111429809 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.3e-71
Identity = 150/171 (87.72%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKR+VWLDPNET TISLANSRMSIRKLIKDG IIKR TT HSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRQVWLDPNETCTISLANSRMSIRKLIKDGFIIKRTTTIHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
            RSRQ H+AKSRGRHSG GKRRGTKEARLPTKLLWMRRMRVLRRLLRKYR+ EKID+HIY
Sbjct: 61  FRSRQSHEAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAII 172
           HQMY RVKGNVYKNKRVLME+IHKVK+EKA E+TLS QVEAKRA NSKA +
Sbjct: 121 HQMYTRVKGNVYKNKRVLMENIHKVKSEKASERTLSAQVEAKRARNSKATV 171

[Close]

BLAST of Pay0011961 vs. ExPASy TrEMBL
Match: A0A6J1JJK9 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111485694 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.0e-70
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDPNET  ISLANSRMSIRKLIKDGLIIKR TT HSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETCNISLANSRMSIRKLIKDGLIIKRTTTIHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
            RSRQ  +AKSRGRHSG GKRRGTKEARLPTKLLWMRRMR+LRRLLRKYR+ EKID+HIY
Sbjct: 61  FRSRQSREAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRILRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAII 172
           H+MY RVKGNVYKNKRVLME+IHKVK+EKA E+TLS QVEAKRA NSKA +
Sbjct: 121 HEMYTRVKGNVYKNKRVLMENIHKVKSEKASERTLSAQVEAKRARNSKATV 171

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BLAST of Pay0011961 vs. NCBI nr
Match: XP_008453495.1 (PREDICTED: 60S ribosomal protein L19-3-like [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 7.7e-83
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVK EKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKTEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of Pay0011961 vs. NCBI nr
Match: KAA0058145.1 (60S ribosomal protein L19-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDPNETTT SLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTTSLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVKAE+ALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEQALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of Pay0011961 vs. NCBI nr
Match: KGN63882.1 (hypothetical protein Csa_013191 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKRRVWLDP+ETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKV AEKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of Pay0011961 vs. NCBI nr
Match: XP_038879968.1 (60S ribosomal protein L19-1-like [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 4.1e-76
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDP ET TISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPAETVTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SRSR+R  AKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYR+ EKID+HIY
Sbjct: 61  SRSRRRSDAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVKAEKA EKTLSIQ+EAKRAINSKA +RL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKASEKTLSIQLEAKRAINSKATVRL 173

[Close]

BLAST of Pay0011961 vs. NCBI nr
Match: XP_023515875.1 (60S ribosomal protein L19-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 6.7e-71
Identity = 151/171 (88.30%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLDCGKRRVWLDPNET TISLANSRMSIRKLIKDGLIIKR+TT HSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETCTISLANSRMSIRKLIKDGLIIKRMTTIHSK 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
            RSRQ H+AKSRGRHSG GKRRGTKEARLPTKLLWMRRMRVLRRLLRKYR+ EKID+HIY
Sbjct: 61  FRSRQSHEAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAINSKAII 172
           HQMY RVKGNVYKNKRVLME+IHKVK+E A E+TLS QVEAKRA NSKA +
Sbjct: 121 HQMYTRVKGNVYKNKRVLMENIHKVKSEIASERTLSAQVEAKRARNSKATV 171

[Close]

BLAST of Pay0011961 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 229.9 bits (585), Expect = 1.5e-60
Identity = 123/166 (74.10%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLA+S L CGKR+VWLDPNE + IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SR+RQ + AK +GRHSG GKR+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KIDRH+Y
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK KAEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of Pay0011961 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59
Identity = 121/166 (72.89%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS + CGK +VWLDPNE++ IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SR+R+   AK +GRHSG GKR+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KID+H+Y
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAIN 167
           H MY+RVKGNV+KNKRVLMESIHK KAEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of Pay0011961 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-58
Identity = 117/166 (70.48%), Postives = 142/166 (85.54%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL +QKRLAAS + CGK +VWLDPNE+  IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SR+R  ++AK +GRHSG GKR+GT+EARLPTK+LWMRRMRVLRR L KYR+ +KIDRH+Y
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVKAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK+KAEKA EKTL+ Q EAKR  N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKN 166

[Close]

BLAST of Pay0011961 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-09
Identity = 46/118 (38.98%), Postives = 71/118 (60.17%), Query Frame = 0


Query: 54  LTTTHSKSRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYE 113
           + + H  SRSR R +     RH+G GK   T EA         RR+++L+RLL+K+   +
Sbjct: 1   MVSIHFHSRSRARRKC----RHTGYGK--DTMEALRRIMKRLTRRLKMLKRLLKKFCWNK 60

Query: 114 KIDRHI-YHQMYIRVKGNVYKNKRVLMESIHKVKAEKAL---EKTLSIQVEAKRAINS 168
           KID+ + YH M+++VKG VYKNK VLMES+HK   E+     E  L+++ E ++  ++
Sbjct: 61  KIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRERKFSGSEMRLALEPEGEKTASA 112

The following BLAST results are available for this feature:

BLAST of Pay0011961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49693	2.1e-59	74.10	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
Q9SRX2	1.8e-58	72.89	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
Q9LUQ6	4.4e-57	70.48	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
Q90YU8	1.1e-50	62.13	60S ribosomal protein L19 OS=Ictalurus punctatus OX=7998 GN=rpl19 PE=2 SV=1	[more]
Q6P5L3	1.8e-50	62.13	60S ribosomal protein L19 OS=Danio rerio OX=7955 GN=rpl19 PE=2 SV=1	[more]

BLAST of Pay0011961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BVU0	3.7e-83	99.42	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494191 PE=3 SV=1	[more]
A0A5A7UX03	1.4e-82	98.84	Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A0A0LSW8	9.2e-82	98.27	Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_1G025150 PE=3 SV=1	[more]
A0A6J1E0X8	7.3e-71	87.72	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111429809 PE=3 SV=1	[more]
A0A6J1JJK9	8.0e-70	86.55	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111485694 PE=3 SV=1	[more]

BLAST of Pay0011961 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453495.1	7.7e-83	99.42	PREDICTED: 60S ribosomal protein L19-3-like [Cucumis melo]	[more]
KAA0058145.1	2.9e-82	98.84	60S ribosomal protein L19-3-like [Cucumis melo var. makuwa]	[more]
KGN63882.1	1.9e-81	98.27	hypothetical protein Csa_013191 [Cucumis sativus]	[more]
XP_038879968.1	4.1e-76	93.06	60S ribosomal protein L19-1-like [Benincasa hispida]	[more]
XP_023515875.1	6.7e-71	88.30	60S ribosomal protein L19-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0011961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02230.1	1.5e-60	74.10	Ribosomal protein L19e family protein	[more]
AT1G02780.1	1.3e-59	72.89	Ribosomal protein L19e family protein	[more]
AT3G16780.1	3.1e-58	70.48	Ribosomal protein L19e family protein	[more]
AT4G16030.1	6.0e-09	38.98	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 6.1E-82 score: 288.2
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..145 e-value: 8.1E-58 score: 194.5
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..172 e-value: 2.1E-45 score: 155.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..87
None	No IPR available	PANTHER	PTHR10722:SF5	60S RIBOSOMAL PROTEIN L19-2	coord: 1..172
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 1..55 e-value: 8.4E-26 score: 91.6
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..172
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..166 e-value: 2.0047E-67 score: 201.039
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011961.1	Pay0011961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome