Pay0011543 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011543
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RNA helicase family protein
Location	chr04: 14436097 .. 14437554 (+)
RNA-Seq Expression	Pay0011543
Synteny	Pay0011543

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGTCTCTTGAAAAAAGGTATGAAATCATTGATCCGGACCAAATATATCTTTCAATAACTTGGCAACTTAAGCATTCTGTAATTGTATTGATTATGTATTCCAGATTCAACGGCGACGATCCGATCTGCGATTGATTATCTCTTCTGCTACAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAAGTTATATTTTTTATTATTATTACTATTGTTTGAAACTGAACTCATTATGGTTTTAAGTCTCTGTTTCTTATCAAAAAAGAGAAAAAAAACCCTAAAATAGAGGAGTAAAACATGTAGACTATTTAAGGAAAAAAACCTTGGTGTGAAGGTTAAAGTTTGACAGTCTCTTTCTTGATAACAGTTGCTACCATTGTTGCAAAGGCATTTGGATACTCTTAGGACTTCTTAGAACTTCATGAAAGAAACAGTCGATCGATGTTTAATTAACTTTTTATAATAACATTGATTAGTTTGGTTAGATTGACTTCGGAGTTATAGTTGTTCAAATATGTTTTGAGTTATAGTTTGGTTAGATTGACTTTAGAGTTATAGTTAGTTCTGGCTATTAGAAACATAGTCAGCGTCTCATCATTTTTTATTGAGGGATAAGATAGCTTTTTTCAAATTACCTTGATAAATTCATTGCATCTATAACTGTTAGCCTGGTTGTAGGGTTGTCATTTGTAAATGTAAATGTTTTGTGGAAGTGTTTTAGATGAAAACAATTTTAGTATTTCTAATAAGTTTGTTGGGAAATTCTGTTTATAGACCTTTTCATTCGTTAATTTAGAAAATGAATTCTGACATATATATACTTCTCATATGTGTCATACTTATGACTTTTTTTTGTTTGGATCACTAATCATGTGATGCTTGTAGTTTTCATAAAAGCTTCTCTATTCTCATCGGCTTGTTCTTCATTGACATTTTACAGGAAATGGGTTTACTGGAAATAAAACATGGTTTGCTTCAACTAGCAGAGTCTTTAAACTTTCTTCATAGCAATGCACGTCTCATTCATCGTGCTATATCTTCGGAGGTATCAATTTTATTTCAACATTTTTTCTTTTTCTGGTAGTTTAAAACTTTTTATTAAGTTTCTTGGAAGTATTTGGAGTTTTTTCTAGTGCTTCATTTTAGAAATGAAGTGTTGATGGATCATGCTTGTTTATGGATAGTAGGTGTTTATGGATCATGCTTGTGTTTTCTGTAGGAGTTTTGTATTTGTGTTGCCTCTAATATGTTTTGTTTTGGACTTTGTGTGAAGTTTTATAATTCATTTAGCTGAGTTTGTGTGATGTATTGTTGAATCAATTTTGTTTCCTTTTATTTTCTTACTAGGTTTTGCCAAAATCCATTGGAGCAGTGAAGCCATATTTACAACAATTCATTGATGTATAG

mRNA sequence

ATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGTCTCTTGAAAAAAGCATTCTGTAATTGTATTGATTATGTATTCCAGATTCAACGGCGACGATCCGATCTGCGATTGATTATCTCTTCTGCTACAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAATTTTCATAAAAGCTTCTCTATTCTCATCGGCTTGTTCTTCATTGACATTTTACAGGAAATGGGTTTACTGGAAATAAAACATGGTTTGCTTCAACTAGCAGAGTCTTTAAACTTTCTTCATAGCAATGCACGTCTCATTCATCGTGCTATATCTTCGGAGGTTTTGCCAAAATCCATTGGAGCAGTGAAGCCATATTTACAACAATTCATTGATGTATAG

Coding sequence (CDS)

ATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGTCTCTTGAAAAAAGCATTCTGTAATTGTATTGATTATGTATTCCAGATTCAACGGCGACGATCCGATCTGCGATTGATTATCTCTTCTGCTACAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAATTTTCATAAAAGCTTCTCTATTCTCATCGGCTTGTTCTTCATTGACATTTTACAGGAAATGGGTTTACTGGAAATAAAACATGGTTTGCTTCAACTAGCAGAGTCTTTAAACTTTCTTCATAGCAATGCACGTCTCATTCATCGTGCTATATCTTCGGAGGTTTTGCCAAAATCCATTGGAGCAGTGAAGCCATATTTACAACAATTCATTGATGTATAG

Protein sequence

MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMNFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSEVLPKSIGAVKPYLQQFIDV

Homology

[Close]

BLAST of Pay0011543 vs. ExPASy Swiss-Prot
Match: F4JRJ6 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana OX=3702 GN=At4g18465 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12
Identity = 41/58 (70.69%), Postives = 45/58 (77.59%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF 59
           M+DEAHERSISTD+LLGLLKK           IQRRR +LRLIISSATIEAK+MS FF
Sbjct: 168 MIDEAHERSISTDILLGLLKK-----------IQRRRPELRLIISSATIEAKTMSNFF 214

[Close]

BLAST of Pay0011543 vs. ExPASy Swiss-Prot
Match: Q9BKQ8 (Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans OX=6239 GN=ddx-35 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           M+DEAHERS +TD+LLGLL+K        + QI   R+DLR+I+SSAT++A+    FF+M
Sbjct: 196 MIDEAHERSCNTDILLGLLRK--------IIQI---RNDLRIIVSSATLDAELFKDFFEM 245

Query: 61  N 62
           N
Sbjct: 256 N 245

[Close]

BLAST of Pay0011543 vs. ExPASy Swiss-Prot
Match: Q9H5Z1 (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX=9606 GN=DHX35 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           M+DEAHER++ TD+ +GLLKK           IQ++R DLRLI++SAT++A     FF  
Sbjct: 174 MLDEAHERTLYTDIAIGLLKK-----------IQKKRGDLRLIVASATLDADKFRDFFNQ 223

Query: 61  N 62
           N
Sbjct: 234 N 223

[Close]

BLAST of Pay0011543 vs. ExPASy Swiss-Prot
Match: Q5RBD4 (Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii OX=9601 GN=DHX35 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           M+DEAHER++ TD+ +GLLKK           IQ++R DLRLI++SAT++A     FF  
Sbjct: 174 MLDEAHERTLYTDIAIGLLKK-----------IQKKRGDLRLIVASATLDADKFRDFFNQ 223

Query: 61  N 62
           N
Sbjct: 234 N 223

[Close]

BLAST of Pay0011543 vs. ExPASy Swiss-Prot
Match: Q38953 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-07
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF 59
           M+DEAHER+I TD+L GLLKK           + +RR DLRLI++SAT++A+  S +F
Sbjct: 633 MLDEAHERTIHTDVLFGLLKK-----------LMKRRLDLRLIVTSATLDAEKFSGYF 679

[Close]

BLAST of Pay0011543 vs. ExPASy TrEMBL
Match: A0A1S4E2L5 (putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Cucumis melo OX=3656 GN=LOC103498775 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-47
Identity = 110/133 (82.71%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 1   MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 60

Query: 61  NFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSEVLPKSI 120
           +FHKSFSI + LFFIDILQEMGLLEIK+GLLQLAESLNFLHSNARLIH  ISS+VLP+SI
Sbjct: 61  SFHKSFSIYVDLFFIDILQEMGLLEIKYGLLQLAESLNFLHSNARLIHCVISSKVLPESI 120

Query: 121 GAVKPYLQQFIDV 134
           GAVK YLQQFI+V
Sbjct: 121 GAVKSYLQQFINV 122

[Close]

BLAST of Pay0011543 vs. ExPASy TrEMBL
Match: A0A5A7TE68 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11218G00010 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 54/75 (72.00%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 68  MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 127

Query: 61  N-FH--KSFSILIGL 73
           + +H  K   IL+GL
Sbjct: 128 SCYHCCKGIWILLGL 131

[Close]

BLAST of Pay0011543 vs. ExPASy TrEMBL
Match: A0A1S3B7Q6 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486709 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.3e-13
Identity = 48/61 (78.69%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 71  MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 120

Query: 61  N 62
           +
Sbjct: 131 S 120

[Close]

BLAST of Pay0011543 vs. ExPASy TrEMBL
Match: A0A5A7UME2 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002070 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.3e-13
Identity = 48/61 (78.69%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 146 MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 195

Query: 61  N 62
           +
Sbjct: 206 S 195

[Close]

BLAST of Pay0011543 vs. ExPASy TrEMBL
Match: A0A0A0LV75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077130 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.3e-13
Identity = 48/61 (78.69%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 168 MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 217

Query: 61  N 62
           +
Sbjct: 228 S 217

[Close]

BLAST of Pay0011543 vs. NCBI nr
Match: XP_016902463.1 (PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902464.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902465.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902466.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902467.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902468.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902469.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo] >XP_016902470.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 4.0e-47
Identity = 110/133 (82.71%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 1   MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 60

Query: 61  NFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSEVLPKSI 120
           +FHKSFSI + LFFIDILQEMGLLEIK+GLLQLAESLNFLHSNARLIH  ISS+VLP+SI
Sbjct: 61  SFHKSFSIYVDLFFIDILQEMGLLEIKYGLLQLAESLNFLHSNARLIHCVISSKVLPESI 120

Query: 121 GAVKPYLQQFIDV 134
           GAVK YLQQFI+V
Sbjct: 121 GAVKSYLQQFINV 122

[Close]

BLAST of Pay0011543 vs. NCBI nr
Match: KAA0039745.1 (putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo var. makuwa] >TYK23035.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-13
Identity = 54/75 (72.00%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 68  MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 127

Query: 61  N-FH--KSFSILIGL 73
           + +H  K   IL+GL
Sbjct: 128 SCYHCCKGIWILLGL 131

[Close]

BLAST of Pay0011543 vs. NCBI nr
Match: KAA0057022.1 (putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 48/61 (78.69%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 146 MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 195

Query: 61  N 62
           +
Sbjct: 206 S 195

[Close]

BLAST of Pay0011543 vs. NCBI nr
Match: XP_008442984.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X3 [Cucumis melo])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 48/61 (78.69%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 51  MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 100

Query: 61  N 62
           +
Sbjct: 111 S 100

[Close]

BLAST of Pay0011543 vs. NCBI nr
Match: XP_004148780.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Cucumis sativus] >KGN64712.1 hypothetical protein Csa_013324 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12
Identity = 48/61 (78.69%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQM 60
           MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM
Sbjct: 168 MVDEAHERSISTDMLLGLLKK-----------IQRRRPDLRLIISSATIEAKSMSTFFQM 217

Query: 61  N 62
           +
Sbjct: 228 S 217

[Close]

BLAST of Pay0011543 vs. TAIR 10
Match: AT4G18465.1 (RNA helicase family protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 41/58 (70.69%), Postives = 45/58 (77.59%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF 59
           M+DEAHERSISTD+LLGLLKK           IQRRR +LRLIISSATIEAK+MS FF
Sbjct: 168 MIDEAHERSISTDILLGLLKK-----------IQRRRPELRLIISSATIEAKTMSNFF 214

[Close]

BLAST of Pay0011543 vs. TAIR 10
Match: AT1G71410.1 (ARM repeat superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 9.3e-10
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 80  EMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSE-VLPKSIGAVK 125
           EM LLE+KHGLLQ++E+LNFLH+NA LIHRAIS E VL  S G+ K
Sbjct: 165 EMSLLEVKHGLLQISETLNFLHNNANLIHRAISPENVLITSAGSWK 210

[Close]

BLAST of Pay0011543 vs. TAIR 10
Match: AT1G22870.1 (Protein kinase family protein with ARM repeat domain )

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 27/35 (77.14%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 80  EMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSE 115
           EM LLE+KHGLLQ+AE+LNFLH+NA LIHRA+S E
Sbjct: 165 EMSLLEVKHGLLQIAETLNFLHNNAHLIHRAVSPE 199

[Close]

BLAST of Pay0011543 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF 59
           M+DEAHER+I TD+L GLLKK           + +RR DLRLI++SAT++A+  S +F
Sbjct: 633 MLDEAHERTIHTDVLFGLLKK-----------LMKRRLDLRLIVTSATLDAEKFSGYF 679

[Close]

BLAST of Pay0011543 vs. TAIR 10
Match: AT5G10370.1 (helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related )

HSP 1 Score: 54.7 bits (130), Expect = 6.7e-08
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 1   MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF 59
           ++DEAHERS++TD+LL LLKK           +  RR DLRL+I SAT +AK +S +F
Sbjct: 425 IIDEAHERSLNTDLLLALLKK-----------LLSRRIDLRLVIMSATADAKQLSQYF 471

The following BLAST results are available for this feature:

BLAST of Pay0011543 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JRJ6	2.5e-12	70.69	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsi...	[more]
Q9BKQ8	2.9e-08	52.46	Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans OX=6...	[more]
Q9H5Z1	1.9e-07	47.54	Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX=9606 GN=DHX35 PE=1 ...	[more]
Q5RBD4	1.9e-07	47.54	Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii OX=9601 GN=DHX35 PE=2 ...	[more]
Q38953	4.2e-07	50.00	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]

BLAST of Pay0011543 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2L5	1.9e-47	82.71	putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Cucumis...	[more]
A0A5A7TE68	1.1e-13	72.00	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Cucumis...	[more]
A0A1S3B7Q6	5.3e-13	78.69	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 OS...	[more]
A0A5A7UME2	5.3e-13	78.69	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 OS...	[more]
A0A0A0LV75	5.3e-13	78.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077130 PE=4 SV=1	[more]

BLAST of Pay0011543 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902463.1	4.0e-47	82.71	PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09...	[more]
KAA0039745.1	2.2e-13	72.00	putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis m...	[more]
KAA0057022.1	1.1e-12	78.69	putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [C...	[more]
XP_008442984.1	1.1e-12	78.69	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 is...	[more]
XP_004148780.1	1.1e-12	78.69	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Cucumis sati...	[more]

BLAST of Pay0011543 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18465.1	1.8e-13	70.69	RNA helicase family protein	[more]
AT1G71410.1	9.3e-10	69.57	ARM repeat superfamily protein	[more]
AT1G22870.1	2.1e-09	77.14	Protein kinase family protein with ARM repeat domain	[more]
AT3G26560.1	3.0e-08	50.00	ATP-dependent RNA helicase, putative	[more]
AT5G10370.1	6.7e-08	50.00	helicase domain-containing protein / IBR domain-containing protein / zinc finger...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..68 e-value: 2.8E-15 score: 58.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011543.1	Pay0011543.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity