Pay0011537 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011537
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	SRP54 domain-containing protein
Location	chr04: 30883547 .. 30884455 (+)
RNA-Seq Expression	Pay0011537
Synteny	Pay0011537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTCTCCACGTGTCACTGCGACCCTTTCACATGGAAGTGAATATAATGACCGAAGCCAATAAGTTTGGTTTTCGTTTCTGTTTTCTCAAACATAAATAAAAAGAAGAAAAAGGGAAAAAGCATTTTAAAAAAAAAAACAAAGAAAGGAAAAAGGGAAAAAAAGAAAAGAAAAAAAGAAAAAAGGAAAAAGAATGGGAAGCCAAGGAAGAGACGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAGTTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCATTTCCTCTCAAGTCGCTACATCTTTGGAAGCTAAGGTCAAGCCAACTTTTTTTTTTTTTTTTGTACATGAAGATGAGTGATGCATTGTTTTCTTGATTTGAAAATTTTATTAAATACATTGAGCTAAGTTCTTAATAGCAAAGATAGTTCAGTGAAAAGGTTATGGAATAAGAGAAAAATAATAATGTGTCGTCCCACATATTTCAGGAACATGAGAAGAGAACAGCAGCGGAAGAAGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAGACGTTGAAGACAACGTTCATCGTCTCCGGAATCATCGCTGCCGTAGCGGTGGCGGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAATTCGTTTTTCTCTCAACTTTGCTCGATCCTCCCTCACTCTTAATCGTCTTTTTTCTTTCTTCTTCTCTTTTTTGTTTTGTTTGACGTGTGTGTTGTTTAATGGGAAAATGGTTAAATTAAAAGTTTATGGTGAGAAAAAGGTTTTCTTTTGTTAGAATATCAAAAGAAAGAGAGATTTTTTTTATATATGTTGTTACATAATTTTATGCTATTAAATATATATAAACCCTACTTGAGAATTATATTGTTGGTG

mRNA sequence

ATTGTCTCCACGTGTCACTGCGACCCTTTCACATGGAAGTGAATATAATGACCGAAGCCAATAAGTTTGGTTTTCGTTTCTGTTTTCTCAAACATAAATAAAAAGAAGAAAAAGGGAAAAAGCATTTTAAAAAAAAAAACAAAGAAAGGAAAAAGGGAAAAAAAGAAAAGAAAAAAAGAAAAAAGGAAAAAGAATGGGAAGCCAAGGAAGAGACGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAGTTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCATTTCCTCTCAAGTCGCTACATCTTTGGAAGCTAAGGAACATGAGAAGAGAACAGCAGCGGAAGAAGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAGACGTTGAAGACAACGTTCATCGTCTCCGGAATCATCGCTGCCGTAGCGGTGGCGGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAATTCGTTTTTCTCTCAACTTTGCTCGATCCTCCCTCACTCTTAATCGTCTTTTTTCTTTCTTCTTCTCTTTTTTGTTTTGTTTGACGTGTGTGTTGTTTAATGGGAAAATGGTTAAATTAAAAGTTTATGGTGAGAAAAAGGTTTTCTTTTGTTAGAATATCAAAAGAAAGAGAGATTTTTTTTATATATGTTGTTACATAATTTTATGCTATTAAATATATATAAACCCTACTTGAGAATTATATTGTTGGTG

Coding sequence (CDS)

ATGGGAAGCCAAGGAAGAGACGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAGTTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCATTTCCTCTCAAGTCGCTACATCTTTGGAAGCTAAGGAACATGAGAAGAGAACAGCAGCGGAAGAAGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAGACGTTGAAGACAACGTTCATCGTCTCCGGAATCATCGCTGCCGTAGCGGTGGCGGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAA

Protein sequence

MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN

Homology

[Close]

BLAST of Pay0011537 vs. ExPASy TrEMBL
Match: A0A1S3B6R1 (uncharacterized protein LOC103486621 OS=Cucumis melo OX=3656 GN=LOC103486621 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK 60
          MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK
Sbjct: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK 60

Query: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
          KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Sbjct: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 96

[Close]

BLAST of Pay0011537 vs. ExPASy TrEMBL
Match: A0A0A0LBF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777020 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK 60
          MGSQGRDGEGFPAVDVERELNPGDNKHVEVDP+SSQVATSLEAKEHEKR AAE+ERKRAK
Sbjct: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPVSSQVATSLEAKEHEKRKAAEDERKRAK 60

Query: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
          KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Sbjct: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 96

[Close]

BLAST of Pay0011537 vs. ExPASy TrEMBL
Match: A0A6J1CUK2 (uncharacterized protein LOC111014362 OS=Momordica charantia OX=3673 GN=LOC111014362 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.7e-24
Identity = 68/89 (76.40%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 8   GEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQ 67
           G  FPA DV+RELNPG N+HVEVDP+SS+VA SLE KE  KR A EEERK A KK + M+
Sbjct: 15  GSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEA-KKNDTMK 74

Query: 68  TLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
           TLKTTFIVSG+IAAVAVAAFAIVKKLREN
Sbjct: 75  TLKTTFIVSGVIAAVAVAAFAIVKKLREN 102

[Close]

BLAST of Pay0011537 vs. ExPASy TrEMBL
Match: A0A6J1KYC8 (uncharacterized protein LOC111498680 OS=Cucurbita maxima OX=3661 GN=LOC111498680 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-23
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 2   GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKK 61
           G+ G  G  FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  K
Sbjct: 9   GATGGAGSRFPAVDVDRELHPGHNQHVTVDPISSQVAASVEDKEQAKRKATVEEERKQAK 68

Query: 62  KKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
           KK+ MQTLKTTFIVSG+IAAVAVAAF +VKKLR+N
Sbjct: 69  KKDTMQTLKTTFIVSGVIAAVAVAAFVVVKKLRQN 103

[Close]

BLAST of Pay0011537 vs. ExPASy TrEMBL
Match: A0A6J1G5S8 (uncharacterized protein LOC111451047 OS=Cucurbita moschata OX=3662 GN=LOC111451047 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.0e-23
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 2   GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKK 61
           G+ G  G  FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  K
Sbjct: 9   GATGGAGSRFPAVDVDRELHPGHNQHVTVDPISSQVAASVEDKEQAKRKATVEEERKQAK 68

Query: 62  KKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
           KK+ MQTLKTTFIVSG++AAVAVAAF +VKKLR+N
Sbjct: 69  KKDTMQTLKTTFIVSGVVAAVAVAAFVVVKKLRQN 103

[Close]

BLAST of Pay0011537 vs. NCBI nr
Match: XP_008442853.1 (PREDICTED: uncharacterized protein LOC103486621 [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK 60
          MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK
Sbjct: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK 60

Query: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
          KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Sbjct: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 96

[Close]

BLAST of Pay0011537 vs. NCBI nr
Match: XP_011652018.1 (uncharacterized protein LOC105434975 [Cucumis sativus] >KGN59143.1 hypothetical protein Csa_001723 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 4.9e-39
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAK 60
          MGSQGRDGEGFPAVDVERELNPGDNKHVEVDP+SSQVATSLEAKEHEKR AAE+ERKRAK
Sbjct: 1  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPVSSQVATSLEAKEHEKRKAAEDERKRAK 60

Query: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
          KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Sbjct: 61 KKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 96

[Close]

BLAST of Pay0011537 vs. NCBI nr
Match: XP_022144747.1 (uncharacterized protein LOC111014362 [Momordica charantia])

HSP 1 Score: 120.6 bits (301), Expect = 7.7e-24
Identity = 68/89 (76.40%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 8   GEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQ 67
           G  FPA DV+RELNPG N+HVEVDP+SS+VA SLE KE  KR A EEERK A KK + M+
Sbjct: 15  GSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEA-KKNDTMK 74

Query: 68  TLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
           TLKTTFIVSG+IAAVAVAAFAIVKKLREN
Sbjct: 75  TLKTTFIVSGVIAAVAVAAFAIVKKLREN 102

[Close]

BLAST of Pay0011537 vs. NCBI nr
Match: XP_023005785.1 (uncharacterized protein LOC111498680 [Cucurbita maxima])

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-22
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 2   GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKK 61
           G+ G  G  FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  K
Sbjct: 9   GATGGAGSRFPAVDVDRELHPGHNQHVTVDPISSQVAASVEDKEQAKRKATVEEERKQAK 68

Query: 62  KKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
           KK+ MQTLKTTFIVSG+IAAVAVAAF +VKKLR+N
Sbjct: 69  KKDTMQTLKTTFIVSGVIAAVAVAAFVVVKKLRQN 103

[Close]

BLAST of Pay0011537 vs. NCBI nr
Match: XP_022947065.1 (uncharacterized protein LOC111451047 [Cucurbita moschata])

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-22
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 2   GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKK 61
           G+ G  G  FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  K
Sbjct: 9   GATGGAGSRFPAVDVDRELHPGHNQHVTVDPISSQVAASVEDKEQAKRKATVEEERKQAK 68

Query: 62  KKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
           KK+ MQTLKTTFIVSG++AAVAVAAF +VKKLR+N
Sbjct: 69  KKDTMQTLKTTFIVSGVVAAVAVAAFVVVKKLRQN 103

[Close]

BLAST of Pay0011537 vs. TAIR 10
Match: AT3G52620.1 (unknown protein; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 7  DGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAM 66
          D   FP  D E ELNPG NK+ EVDP+SS++A+       EK     E+R+ AK K++  
Sbjct: 4  DTTTFPEGDAEAELNPGQNKNFEVDPVSSEIAS-------EKVQKIVEKRENAKAKRDGA 63

Query: 67 QTLKTTFIVSGIIAAVAVAAFAIVKKLREN 97
          +TLK T IVS +I AVA AAFAI KKL+EN
Sbjct: 64 RTLKNTIIVSAVIVAVAGAAFAITKKLKEN 86

The following BLAST results are available for this feature:

BLAST of Pay0011537 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6R1	1.7e-40	100.00	uncharacterized protein LOC103486621 OS=Cucumis melo OX=3656 GN=LOC103486621 PE=...	[more]
A0A0A0LBF7	2.4e-39	96.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777020 PE=4 SV=1	[more]
A0A6J1CUK2	3.7e-24	76.40	uncharacterized protein LOC111014362 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1KYC8	5.3e-23	68.42	uncharacterized protein LOC111498680 OS=Cucurbita maxima OX=3661 GN=LOC111498680...	[more]
A0A6J1G5S8	7.0e-23	67.37	uncharacterized protein LOC111451047 OS=Cucurbita moschata OX=3662 GN=LOC1114510...	[more]

BLAST of Pay0011537 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442853.1	3.4e-40	100.00	PREDICTED: uncharacterized protein LOC103486621 [Cucumis melo]	[more]
XP_011652018.1	4.9e-39	96.88	uncharacterized protein LOC105434975 [Cucumis sativus] >KGN59143.1 hypothetical ...	[more]
XP_022144747.1	7.7e-24	76.40	uncharacterized protein LOC111014362 [Momordica charantia]	[more]
XP_023005785.1	1.1e-22	68.42	uncharacterized protein LOC111498680 [Cucurbita maxima]	[more]
XP_022947065.1	1.4e-22	67.37	uncharacterized protein LOC111451047 [Cucurbita moschata]	[more]

BLAST of Pay0011537 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52620.1	2.0e-14	52.22	unknown protein; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..64
None	No IPR available	PANTHER	PTHR37741	TRANSMEMBRANE PROTEIN	coord: 5..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011537.1	Pay0011537.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane