Pay0011361 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011361
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Major pollen allergen Ole e 6-like
Location	chr07: 26036272 .. 26037193 (-)
RNA-Seq Expression	Pay0011361
Synteny	Pay0011361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACGATCAACCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGAAGATATGTTTTTTTTTTTAATCAAGACGATAAATAGTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTGTTATGGAAATTAGTGAGTTTTAGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGACGCTAGAATTTGAAGGGATATGACACAATTGAAATTTTAGAATGAAAACTCATGTCAAAATTTAACGAAAATTTAGTTGTTTATTTCTCCCAACTTATTGATCGTTTTCTTTTTATTTGTGTGTTAACTTCGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTATCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCACATATTTA

mRNA sequence

ATACGATCAACCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTATCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCACATATTTA

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN

Homology

[Close]

BLAST of Pay0011361 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.7e-44
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
           MAK+ST+VFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1   MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61  EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN 100
            KACIAKD ANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of Pay0011361 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.8e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 89
          EKACIAKDGANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of Pay0011361 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04
Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    VF MCI VVV +LQF  A+   D  T+ E +             ++KSC ETC
Sbjct: 1  MAKKMMAVFLMCI-VVVATLQFVMAN-EEDGVTKYEAKFD----------AKYKSCYETC 60

Query: 61 EKACIAKD-GANTSCHSTCDKDCMKKEVVDKISDKL 96
          EK C+  D    + C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

[Close]

BLAST of Pay0011361 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.4e-04
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MA     +F MCI VVV +LQF+ A+       E +  +K            +KSC ETC
Sbjct: 1  MANKMIALFLMCI-VVVAALQFANANKEDVAKYEAKFDAK------------YKSCFETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 96
          EK C+      + C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRYGSGQSYCEVKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of Pay0011361 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
           MAK+ST+VFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1   MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61  EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN 100
            KACIAKD ANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of Pay0011361 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 7.9e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 89
          EKACIAKDGANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of Pay0011361 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-10
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQ-SEISSVMPQFKSCVETCE 62
           K   VVFFMCI VV+GSLQFS+A  TA+   +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCI-VVMGSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDGANTSCHSTCDKDCMKKEV 88
           K C AK  AN SCH  C+ DC +K +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTI 104

[Close]

BLAST of Pay0011361 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.9 bits (172), Expect = 7.2e-09
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TAD+ TE+E + K   S+  +V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 96
          +K C      N SC S CD DC KKEV +K   K+
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEVENKFKIKI 85

[Close]

BLAST of Pay0011361 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS    TAD   E+E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFS----TADSPAEMEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKIS 93
          EK C+AK   + SC   C+ DC KKEV +K +
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEVSEKFN 87

The following BLAST results are available for this feature:

BLAST of Pay0011361 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3F9	9.7e-44	93.94	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7SXV7	3.8e-40	100.00	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0K9Z9	2.0e-04	39.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A0A0KPA7	4.4e-04	35.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]

BLAST of Pay0011361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036015.1	2.0e-43	93.94	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAA0035393.1	7.9e-40	100.00	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAE8637567.1	2.2e-10	47.67	hypothetical protein CSA_017844, partial [Cucumis sativus]	[more]
KAG6595593.1	7.2e-09	46.32	hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595587.1	2.1e-08	44.57	hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0011361 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 51..95 e-value: 2.1E-10 score: 42.0
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 52..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011361.1	Pay0011361.1	mRNA