Pay0011359 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011359
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE2
Location	chr12: 21161151 .. 21162746 (+)
RNA-Seq Expression	Pay0011359
Synteny	Pay0011359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCTCGAGCAAAATCATGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATATAGAAGCCTCCAAATATCCAGAATGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGGTACCTGGTCTCTAGTACCTCGACTTCCATCTATGAATGTTGTTGGTTGTAAATGGGTTTTTCGAATGAAATATAATCTCGATGGCACTATTGCTCATCACAAGGCGCGACTGGTTGCTAAAGGTTATCATCAGGTACAAGGTTTTGATTTTGATGAAACATTTAGTCCTATTGTTAAGAAACCTACCATAGGCATCATTCTTGCTCTTGCTGCTCAATACAATTGGTCTTTAACTCAGTTAGATGTTAAAAATGCGTTTCTTCATAGTATTCTTCAGGAAACAGTGTACATGGCTCAACCTACTGGCTTCCAAGACAAAACATGTTTCAATCATGTGTGTCTCCTCCACAAGAGTCTTTATGGTCTCAAACAGGCCCATCGCGCTTGGTTTGAACGCTTTACATCTTATTTATTCACTTTGGGTTTTGTTGCGTCTACAGCTGGTCCCTCATTATTCATTCGATCAGTCGGATCCTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCACTAGACCTGACTATTTATACATTTCTGTTCTTAAAAATCAATTGGCCCTGGAATTCAAAATATCCAACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTGATGGCATATTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTTTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATTGCAGACTAGTTAGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTCAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCAGATATCTCCATGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCATTTTCTCTACAAACCTTTTGTCATTCTGATTGGACAGGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCCTTTCTCGATTCTAATCTAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAAAAGCAGAATATCATTCCCTTGCCACTACTACTGCCGATCTTTACTGGATCCGACAGCTTCTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGATGTGACAATGTTTCTACTATACCTCTTGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATTGAAATTGATTATCACTTTGCTCGGGAAAAAGTTCTTCGCAAAGACATCTCCATCCGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACTTGAGTCATCTGTTTGA

mRNA sequence

ATGCAAGCTCGAGCAAAATCATGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATATAGAAGCCTCCAAATATCCAGAATGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTAGACCTGACTATTTATACATTTCTGTTCTTAAAAATCAATTGGCCCTGGAATTCAAAATATCCAACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTGATGGCATATTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTTTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATTGCAGACTAGTTAGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTCAGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCCTTTCTCGATTCTAATCTAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAAAAGCAGAATATCATTCCCTTGCCACTACTACTGCCGATCTTTACTGGATCCGACAGCTTCTATTTTTTCATGCTCGCACCAAACACATTGAAATTGATTATCACTTTGCTCGGGAAAAAGTTCTTCGCAAAGACATCTCCATCCGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACTTGAGTCATCTGTTTGA

Coding sequence (CDS)

ATGCAAGCTCGAGCAAAATCATGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATATAGAAGCCTCCAAATATCCAGAATGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTAGACCTGACTATTTATACATTTCTGTTCTTAAAAATCAATTGGCCCTGGAATTCAAAATATCCAACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTGATGGCATATTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTTTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATTGCAGACTAGTTAGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTCAGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCCTTTCTCGATTCTAATCTAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAAAAGCAGAATATCATTCCCTTGCCACTACTACTGCCGATCTTTACTGGATCCGACAGCTTCTATTTTTTCATGCTCGCACCAAACACATTGAAATTGATTATCACTTTGCTCGGGAAAAAGTTCTTCGCAAAGACATCTCCATCCGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACTTGAGTCATCTGTTTGA

Protein sequence

MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQDDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVSDTSDRRSTSGFIAFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLLFFHARTKHIEIDYHFAREKVLRKDISIRYISSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

Homology

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BLAST of Pay0011359 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.7e-34
Identity = 102/308 (33.12%), Postives = 147/308 (47.73%), Query Frame = 0


Query: 51   DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
            DDI++T  D   +    + L+  F + +   L YFLG+E +    G+ ++Q +Y+ DLL 
Sbjct: 1152 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLA 1211

Query: 111  TSGMTSAKSCITPMSTS--FDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVS 170
             + M +AK   TPM+ S    LY+      DP+ Y  +V SLQYL FTRPDI+++VNR+S
Sbjct: 1212 RTNMITAKPVTTPMAPSPKLSLYS-GTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLS 1271

Query: 171  -------------------------------------------------DTSDRRSTSGF 230
                                                             D  D  ST+G+
Sbjct: 1272 QFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGY 1331

Query: 231  IAFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL--------------- 281
            I +L  + ISWSSKKQ  V RSST+AEY S+A T++++ WI  LL               
Sbjct: 1332 IVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYC 1391

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BLAST of Pay0011359 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.7e-34
Identity = 102/307 (33.22%), Postives = 146/307 (47.56%), Query Frame = 0


Query: 51   DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
            DDI++T  D + +    + L+  F +     L YFLG+E +    G+ ++Q +Y  DLL 
Sbjct: 1135 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLA 1194

Query: 111  TSGMTSAKSCITPMSTSFDL-YTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVS- 170
             + M +AK   TPM+TS  L         DP+ Y  +V SLQYL FTRPD++++VNR+S 
Sbjct: 1195 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQ 1254

Query: 171  ------------------------------------------------DTSDRRSTSGFI 230
                                                            DT D  ST+G+I
Sbjct: 1255 YMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYI 1314

Query: 231  AFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL---------------- 281
             +L  + ISWSSKKQ  V RSST+AEY S+A T+++L WI  LL                
Sbjct: 1315 VYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCD 1374

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BLAST of Pay0011359 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.5e-28
Identity = 78/218 (35.78%), Postives = 113/218 (51.83%), Query Frame = 0


Query: 51  DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
           DDI++T      +++L  QL+  F + +LGP+ YFLG++I++   G+F++Q KY   +L+
Sbjct: 8   DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN 67

Query: 111 TSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRV--- 170
            +GM   K   TP+    +       + DPS +  +V +LQYLT TRPDI+++VN V   
Sbjct: 68  NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQR 127

Query: 171 ------------------------------------------SD----TSDRRSTSGFIA 220
                                                     SD    TS RRST+GF  
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

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BLAST of Pay0011359 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 7.9e-27
Identity = 91/322 (28.26%), Postives = 147/322 (45.65%), Query Frame = 0


Query: 40   MHEEFNALQAQDDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFV 99
            ++E    L   DD+++   D   ++  K  L  +F++++L  +K+F+G+ I+   D I++
Sbjct: 1078 INENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYL 1137

Query: 100  NQAKYLNDLLHTSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCR-LVSSLQYLTF-TR 159
            +Q+ Y+  +L    M +  +  TP+ +  + Y +     D +  CR L+  L Y+   TR
Sbjct: 1138 SQSAYVKKILSKFNMENCNAVSTPLPSKIN-YELLNSDEDCNTPCRSLIGCLMYIMLCTR 1197

Query: 160  PDIAFSVNRVSDTS---------------------------------------------- 219
            PD+  +VN +S  S                                              
Sbjct: 1198 PDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDW 1257

Query: 220  -----DRRSTSGFI-AFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL- 279
                 DR+ST+G++    D NLI W++K+Q++V+ SST+AEY +L     +  W++ LL 
Sbjct: 1258 AGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLT 1317

Query: 280  --------------------------FFHARTKHIEIDYHFAREKVLRKDISIRYISSNN 281
                                        H R KHI+I YHFARE+V    I + YI + N
Sbjct: 1318 SINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTEN 1377

[Close]

BLAST of Pay0011359 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.7e-10
Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 169  DTSDRRSTSGFIAFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL---- 228
            D  +R+S++G++       ISW SK Q  V+ S+T+AEY +   T  ++ W+++ L    
Sbjct: 1186 DIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELG 1245

Query: 229  ----------------------FFHARTKHIEIDYHFAREKVLRKDISIRYISSNNQLAD 267
                                   +HARTKHI++ YH+ RE V  + + +  IS+N   AD
Sbjct: 1246 LHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPAD 1305

[Close]

BLAST of Pay0011359 vs. ExPASy TrEMBL
Match: A0A1S4DZJ0 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991247 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.6e-115
Identity = 227/292 (77.74%), Postives = 235/292 (80.48%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQDDIIVTRPDY 60
           MQ RAKS IFKP AFHITTALPTPTSY EASKYPEWRT MHEEFN LQAQDDIIVT P Y
Sbjct: 1   MQTRAKSGIFKPNAFHITTALPTPTSYTEASKYPEWRTTMHEEFNVLQAQDDIIVTGPVY 60

Query: 61  LYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSC 120
            YIS+LKNQLALEFKIS+L PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTS KSC
Sbjct: 61  SYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSTKSC 120

Query: 121 ITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVSDTSDRRSTSGFI 180
           ITPMSTS DLYTIAPPFNDPSLYCRLV SLQYLTFTRPDI FSVNRV    D    +GFI
Sbjct: 121 ITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLID-VPPAGFI 180

Query: 181 AFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL---------------- 240
           AFLDSN ISWSSKKQSTVS SST+ EY SLATTT+DLYWIRQLL                
Sbjct: 181 AFLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLKTSPTLWCD 240

Query: 241 -----------FFHARTKHIEIDYHFAREKVLRKDISIRYISSNNQLADILT 266
                       FHARTKHIEIDYHF R+KVLRKDISIRYISSNN+L DI +
Sbjct: 241 NVSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDISIRYISSNNELVDIFS 291

[Close]

BLAST of Pay0011359 vs. ExPASy TrEMBL
Match: A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 7.8e-110
Identity = 265/505 (52.48%), Postives = 266/505 (52.67%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQ RAKS IFKPKAFHITTALPTPTSY EASKYPEWRTAMHEEFNALQAQ          
Sbjct: 152 MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVPRLP 211

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 212 SKNVVGCKWVFRIKYNPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILAL 271

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 272 AAQYNWSLTQLDVKNDFFHGILQETVYMTQSTDFQDKTCPNHVCLLHKSLYADPSLFIRS 331

Query: 181 ------------DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF 240
                       DDIIVT  DYLYI VLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF
Sbjct: 332 VGSFLSYLLLYVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF 391

Query: 241 VNQAKYLNDLLHTSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRP 289
           VNQAKYLNDLLHTSGMTSAKSCITPMSTS DLYTIAPPFNDP LY RLV SLQYLTFTRP
Sbjct: 392 VNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP 451

[Close]

BLAST of Pay0011359 vs. ExPASy TrEMBL
Match: A0A5A7UZE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00300 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.3e-109
Identity = 249/442 (56.33%), Postives = 260/442 (58.82%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQ RAKS IFKPKAFHITTALPTPTSY EASKYPEWRT MHEEFNALQAQ          
Sbjct: 324 MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTPMHEEFNALQAQGTWSLVPRLP 383

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 384 SMNVVGCKWVFRIKYNLDGTIARHKARLVAKGYHQETVYMTQPTGFQNKTCPNHVCLLHK 443

Query: 121 --------------------------------------------------DDIIVTRPDY 180
                                                             DDIIVT PDY
Sbjct: 444 SLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDY 503

Query: 181 LYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSC 240
           LYIS LKNQLALEFKIS+LGPLKYFLGLEIQSSIDGI VNQA+YLNDLLHTSGMTSAKSC
Sbjct: 504 LYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAEYLNDLLHTSGMTSAKSC 563

Query: 241 ITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAF--SVNRV-----SDTSDR 289
           ITP+STS DLYTIAPPFNDPSLY RL          +P +    +V R+      DTSDR
Sbjct: 564 ITPISTSLDLYTIAPPFNDPSLYRRLF-------MHKPTVIHFSAVKRILRYLCGDTSDR 623

[Close]

BLAST of Pay0011359 vs. ExPASy TrEMBL
Match: A0A5D3CA49 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002060 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 2.0e-105
Identity = 235/380 (61.84%), Postives = 247/380 (65.00%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQDD-IIVTRPD 60
           MQ RAKS IFKPKAFHITTALPTPTSY EASKYPEWRTAMHEEFNALQAQ    +V R  
Sbjct: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWCLVPRLP 60

Query: 61  YLYISVLKNQLALEFK--------------------------------------ISNLGP 120
            + +   K    +++                                       +S L  
Sbjct: 61  SMNVVGCKWVFRIKYNPDGTIAHHKARLVVKGYHQETVYMAQPTGFQDKTCPNHVSLLHK 120

Query: 121 LKYFLGLE---IQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSFDLYTIAPPFN 180
             Y L      IQSSIDGIF NQAKYLNDLLHTSGMTSAKSCITPMSTS DLYTIAPPFN
Sbjct: 121 SLYVLSWSRNPIQSSIDGIFANQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFN 180

Query: 181 DPSLYCRLVSSLQYLTFTRPDIAFSVNRVS-----------------------DTSDRRS 240
           DPSLY RLV SLQYLTFTRPDIAFSVNRVS                       DTSD+RS
Sbjct: 181 DPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLHGDTSDQRS 240

Query: 241 TSGFIAFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL----------- 289
           TSGFIAFLDSN ISWSSKKQ TVSRSST+AEY SLATTT DLYWI+QLL           
Sbjct: 241 TSGFIAFLDSNPISWSSKKQPTVSRSSTEAEYRSLATTTTDLYWIQQLLCDLHVPLKTSQ 300

[Close]

BLAST of Pay0011359 vs. ExPASy TrEMBL
Match: A0A5A7TWG2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold199G00090 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.3e-100
Identity = 215/311 (69.13%), Postives = 219/311 (70.42%), Query Frame = 0


Query: 51  DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
           D+IIVTRPDYLYI VLKNQLALEFKIS+LGPLKYFLGLEIQSSIDGIF NQAKYLNDLLH
Sbjct: 114 DNIIVTRPDYLYIFVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFNNQAKYLNDLLH 173

Query: 111 TSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVS-- 170
           TSGMTS K CITPMSTS DLYTIAPPFNDPSLY RLV SLQYLTFT P+IAFSVNRVS  
Sbjct: 174 TSGMTSTKFCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTHPNIAFSVNRVSSC 233

Query: 171 ---------------------------------------------DTSDRRSTSGFIAFL 230
                                                        DTSDRRSTSGFIAFL
Sbjct: 234 INQLLFTFQPSNASSDISVILQPFGIKFRKSSFSLQTFCDSDWTCDTSDRRSTSGFIAFL 293

Query: 231 DSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL------------------- 288
            SN ISW SKKQSTVSRSST+AEY SLATTTADLYWIRQLL                   
Sbjct: 294 GSNPISWYSKKQSTVSRSSTEAEYRSLATTTADLYWIRQLLCDLHVPLKTTPTLWCDNVF 353

[Close]

BLAST of Pay0011359 vs. NCBI nr
Match: XP_016901398.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 425.6 bits (1093), Expect = 3.3e-115
Identity = 227/292 (77.74%), Postives = 235/292 (80.48%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQDDIIVTRPDY 60
           MQ RAKS IFKP AFHITTALPTPTSY EASKYPEWRT MHEEFN LQAQDDIIVT P Y
Sbjct: 1   MQTRAKSGIFKPNAFHITTALPTPTSYTEASKYPEWRTTMHEEFNVLQAQDDIIVTGPVY 60

Query: 61  LYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSC 120
            YIS+LKNQLALEFKIS+L PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTS KSC
Sbjct: 61  SYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSTKSC 120

Query: 121 ITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVSDTSDRRSTSGFI 180
           ITPMSTS DLYTIAPPFNDPSLYCRLV SLQYLTFTRPDI FSVNRV    D    +GFI
Sbjct: 121 ITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLID-VPPAGFI 180

Query: 181 AFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL---------------- 240
           AFLDSN ISWSSKKQSTVS SST+ EY SLATTT+DLYWIRQLL                
Sbjct: 181 AFLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLKTSPTLWCD 240

Query: 241 -----------FFHARTKHIEIDYHFAREKVLRKDISIRYISSNNQLADILT 266
                       FHARTKHIEIDYHF R+KVLRKDISIRYISSNN+L DI +
Sbjct: 241 NVSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDISIRYISSNNELVDIFS 291

[Close]

BLAST of Pay0011359 vs. NCBI nr
Match: KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-109
Identity = 265/505 (52.48%), Postives = 266/505 (52.67%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQ RAKS IFKPKAFHITTALPTPTSY EASKYPEWRTAMHEEFNALQAQ          
Sbjct: 152 MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVPRLP 211

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 212 SKNVVGCKWVFRIKYNPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILAL 271

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 272 AAQYNWSLTQLDVKNDFFHGILQETVYMTQSTDFQDKTCPNHVCLLHKSLYADPSLFIRS 331

Query: 181 ------------DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF 240
                       DDIIVT  DYLYI VLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF
Sbjct: 332 VGSFLSYLLLYVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF 391

Query: 241 VNQAKYLNDLLHTSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRP 289
           VNQAKYLNDLLHTSGMTSAKSCITPMSTS DLYTIAPPFNDP LY RLV SLQYLTFTRP
Sbjct: 392 VNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP 451

[Close]

BLAST of Pay0011359 vs. NCBI nr
Match: KAA0061282.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 405.2 bits (1040), Expect = 4.7e-109
Identity = 249/442 (56.33%), Postives = 260/442 (58.82%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQ RAKS IFKPKAFHITTALPTPTSY EASKYPEWRT MHEEFNALQAQ          
Sbjct: 324 MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTPMHEEFNALQAQGTWSLVPRLP 383

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 384 SMNVVGCKWVFRIKYNLDGTIARHKARLVAKGYHQETVYMTQPTGFQNKTCPNHVCLLHK 443

Query: 121 --------------------------------------------------DDIIVTRPDY 180
                                                             DDIIVT PDY
Sbjct: 444 SLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDY 503

Query: 181 LYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSC 240
           LYIS LKNQLALEFKIS+LGPLKYFLGLEIQSSIDGI VNQA+YLNDLLHTSGMTSAKSC
Sbjct: 504 LYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAEYLNDLLHTSGMTSAKSC 563

Query: 241 ITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAF--SVNRV-----SDTSDR 289
           ITP+STS DLYTIAPPFNDPSLY RL          +P +    +V R+      DTSDR
Sbjct: 564 ITPISTSLDLYTIAPPFNDPSLYRRLF-------MHKPTVIHFSAVKRILRYLCGDTSDR 623

[Close]

BLAST of Pay0011359 vs. NCBI nr
Match: TYK08058.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 392.1 bits (1006), Expect = 4.1e-105
Identity = 235/380 (61.84%), Postives = 247/380 (65.00%), Query Frame = 0


Query: 1   MQARAKSCIFKPKAFHITTALPTPTSYIEASKYPEWRTAMHEEFNALQAQDD-IIVTRPD 60
           MQ RAKS IFKPKAFHITTALPTPTSY EASKYPEWRTAMHEEFNALQAQ    +V R  
Sbjct: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWCLVPRLP 60

Query: 61  YLYISVLKNQLALEFK--------------------------------------ISNLGP 120
            + +   K    +++                                       +S L  
Sbjct: 61  SMNVVGCKWVFRIKYNPDGTIAHHKARLVVKGYHQETVYMAQPTGFQDKTCPNHVSLLHK 120

Query: 121 LKYFLGLE---IQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSFDLYTIAPPFN 180
             Y L      IQSSIDGIF NQAKYLNDLLHTSGMTSAKSCITPMSTS DLYTIAPPFN
Sbjct: 121 SLYVLSWSRNPIQSSIDGIFANQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFN 180

Query: 181 DPSLYCRLVSSLQYLTFTRPDIAFSVNRVS-----------------------DTSDRRS 240
           DPSLY RLV SLQYLTFTRPDIAFSVNRVS                       DTSD+RS
Sbjct: 181 DPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLHGDTSDQRS 240

Query: 241 TSGFIAFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL----------- 289
           TSGFIAFLDSN ISWSSKKQ TVSRSST+AEY SLATTT DLYWI+QLL           
Sbjct: 241 TSGFIAFLDSNPISWSSKKQPTVSRSSTEAEYRSLATTTTDLYWIQQLLCDLHVPLKTSQ 300

[Close]

BLAST of Pay0011359 vs. NCBI nr
Match: KAA0047933.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 374.4 bits (960), Expect = 8.8e-100
Identity = 215/311 (69.13%), Postives = 219/311 (70.42%), Query Frame = 0


Query: 51  DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
           D+IIVTRPDYLYI VLKNQLALEFKIS+LGPLKYFLGLEIQSSIDGIF NQAKYLNDLLH
Sbjct: 114 DNIIVTRPDYLYIFVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFNNQAKYLNDLLH 173

Query: 111 TSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVS-- 170
           TSGMTS K CITPMSTS DLYTIAPPFNDPSLY RLV SLQYLTFT P+IAFSVNRVS  
Sbjct: 174 TSGMTSTKFCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTHPNIAFSVNRVSSC 233

Query: 171 ---------------------------------------------DTSDRRSTSGFIAFL 230
                                                        DTSDRRSTSGFIAFL
Sbjct: 234 INQLLFTFQPSNASSDISVILQPFGIKFRKSSFSLQTFCDSDWTCDTSDRRSTSGFIAFL 293

Query: 231 DSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQLL------------------- 288
            SN ISW SKKQSTVSRSST+AEY SLATTTADLYWIRQLL                   
Sbjct: 294 GSNPISWYSKKQSTVSRSSTEAEYRSLATTTADLYWIRQLLCDLHVPLKTTPTLWCDNVF 353

[Close]

BLAST of Pay0011359 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-29
Identity = 78/218 (35.78%), Postives = 113/218 (51.83%), Query Frame = 0


Query: 51  DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
           DDI++T      +++L  QL+  F + +LGP+ YFLG++I++   G+F++Q KY   +L+
Sbjct: 8   DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN 67

Query: 111 TSGMTSAKSCITPMSTSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRV--- 170
            +GM   K   TP+    +       + DPS +  +V +LQYLT TRPDI+++VN V   
Sbjct: 68  NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQR 127

Query: 171 ------------------------------------------SD----TSDRRSTSGFIA 220
                                                     SD    TS RRST+GF  
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

[Close]

BLAST of Pay0011359 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29
Identity = 102/307 (33.22%), Postives = 143/307 (46.58%), Query Frame = 0


Query: 51  DDIIVTRPDYLYISVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLH 110
           DDII+   +   +  LK+QL   FK+ +LGPLKYFLGLEI  S  GI + Q KY  DLL 
Sbjct: 285 DDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLD 344

Query: 111 TSGMTSAKSCITPM--STSFDLYTIAPPFNDPSLYCRLVSSLQYLTFTRPDIAFSVNRVS 170
            +G+   K    PM  S +F  ++    F D   Y RL+  L YL  TR DI+F+VN++S
Sbjct: 345 ETGLLGCKPSSVPMDPSVTFSAHS-GGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLS 404

Query: 171 DTSD-------------------------------------------------RRSTSGF 230
             S+                                                 RRST+G+
Sbjct: 405 QFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGY 464

Query: 231 IAFLDSNLISWSSKKQSTVSRSSTKAEYHSLATTTADLYWIRQ-------------LLF- 277
             FL ++LISW SKKQ  VS+SS +AEY +L+  T ++ W+ Q             LLF 
Sbjct: 465 CMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFC 524

The following BLAST results are available for this feature:

BLAST of Pay0011359 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	6.7e-34	33.12	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	6.7e-34	33.22	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	2.5e-28	35.78	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	7.9e-27	28.26	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	6.7e-10	31.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Pay0011359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZJ0	1.6e-115	77.74	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7TPR4	7.8e-110	52.48	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7UZE5	2.3e-109	56.33	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3CA49	2.0e-105	61.84	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TWG2	4.3e-100	69.13	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Pay0011359 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901398.1	3.3e-115	77.74	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0045362.1	1.6e-109	52.48	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0061282.1	4.7e-109	56.33	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative m...	[more]
TYK08058.1	4.1e-105	61.84	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0047933.1	8.8e-100	69.13	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0011359 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	1.7e-29	35.78	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	3.0e-29	33.22	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 51..124 e-value: 6.2E-13 score: 48.9
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 226..280
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 226..280
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 168..268 e-value: 1.31277E-49 score: 159.171
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 44..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011359.1	Pay0011359.1	mRNA