Pay0011270 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011270
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	LOB domain-containing protein
Location	chr12: 18233974 .. 18237744 (+)
RNA-Seq Expression	Pay0011270
Synteny	Pay0011270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAGTAGAGGGGGCACTCTCCAAATTGTGCTTCAACATATATTCCTATATTGTTTTCCTAGAGAATAAAGGAGGGGGGATACAAGAGGACGATGAAGACTGAAAATGGGAGGAAACAAGGGGGAGGAGCAGCCCCATGCGCAGCATGCAAGCTTCTTAGAAGAAGGTGCGGGGAAGAATGTGTATTTGCTCCATACTTTCCTGCTGACCAACCTCATAAGTTCGCCAACGTTCATAAGGTTTTCGGCGCTAGCAATGTTAACAAAATGCTTCAGGTCTTTCTCTCTTTTATCTTTTCCTTTTTACATTAAATAACTACAACTAAACATATCTTAATCACTATCTTTATTAATCGTAAACTAACGAACAAAAACGCTTGTTTTATGTTAAAGAAATAACTTATTGTAAACTAAACTCCACGTGTGTTGTTTATTTTATAAATGGTTATGATCATATGTAATGAATCGTACTATCTTTTTGAACGGTTTTTCTTAAGACAAAGAGTGTATAGTATAAAAATTTAAACATTAAATTTGAAAGGAAAGGTAAAGATAATATTTGCTAATCACTGTTGAGTTACATTGCCTTAACTCAACTTTTATAAATTTAAATTAAAAAAAAGAAAACACAATTAAATAGGTATTTGTTTTTAATTTTGTCTTTTTTTGGGTTTCTCTTGGGCAGCGTATGAAAGTGGGTTAGGAAAATTTGCAACAATCTTTGACCAAAACTATTCCAACTTTCGTAGCTGTTTGGGCTGCAGTTTATAGACAAGATGTCAAAAGGTTAATTATCAAAAGTGAATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATATTTATTTATTTATTATTTAACTAAATTAAAATAAAAAATAGAAAAGTATATTTATTATTGAACTAAATTAAAATAAAAAATAGAAAAGTAAATCTCCTAACATTTGGTGATGATCAAAGTCGTGTTAATATCGTTGAGGAAAGTTTGTTTTAAATTTTCTTTTACGTCATGAAATAGAGTTTTTTATTTTATTTTTTAATTTATAATATTAAACTTTAAGAAATTTAGATGATAGGTAGAACATATTGACTCTATTATGAAAATGTTGACAAATATTGGTTGAGTTACCATCGCATGCTAATAGCTATAGAAAATTGAAACTATCATTAAAATAAATAAACCTAATAAGATAATTCAAAATGTCAAAGATAGGATTTTCAAAAAGTCTCAAAAGAAATCAACATTCGAAATATAACTATTAAGTCTATAATTTAATTACTTTTGCAAGAGATTTTCAAAAATAACAAAACATTAAAATTATTTACAAAACATAACAAAATCCATCCAACTTTTCATAGTCTATTTAAGTTTTCTTTTTGTTATATTTTGTAAATAATTTTAATATTTTTGTCTATCTATGATAATTTTTATATTATTACCTTTTATTTTTAATATTAATATTATTATTATGCCAACAAGAGCTCAGTTCGATTTAGTACTTGAAGACAAAACGTATCCTTTAGATCCTCTTCCTCCAGTTTGTACTAAAAATTACTTTTTTTTTTTGTTTATATATAAATAAATTATATATTTATATTAAAAAAAAAAAGGAAGAAAATGGTGGCTTATTGCTATCAACTTTTAACGGTTTTAACCTTTTTTCATTGCGACCGTTAATAATTAATAAAATATTTATGGTGGAAAATACAAAAAGGTGTGTCTTTTCATTTAAGAAAAGCATCAAATTTTCTTTTCTTTTCTCTTTTGTTTAAAGGGGAAAAAAAGAATTCAAAACAACTCTTTGAAAAAAGAGAGTTGTAGTTTCAAGCCAAATTCATGATGCACATAGACCAAACAAAATAAACCAAAATTACTAAAGTAGCCTATTATTCAAAGCTAATTACAATTCATACCCTATTGCTTTAAATATTACTTTTAATCCTTTAAAAAAGAATTTAAAAATTATACAAAATATTACTCTCAAGACCTAATTTATTACAATTTTTTACTTTATACATAATTAAAACAAGAATTATAATATCATATTATTTTTATATTATAAGAAATTAAAAAAAAAAAAGTTGCTGACATCTCACGTGGTACATACTGCAGAAGTATTTTAAACGATAAAACTACTCAAAATATTTACAAATATCACTATCTATTATCAATAATAGACAATAATAAACCTCTAATAGGCGACTATCATACATCAACACTCTATATATGAATGATAGACGATAATAGTCTACCAAGTTCTATCGATATTTATCTCTAATAAATAATGATATTTTACTGTATTTATAAAATATATTGGTTTGATTATATATCGAAAACAAACCTAAAAGAATAAAAAGTGAATCAATTATTGAATAAAAGCTATTAAGAAGAATATACATTTAATTAATAAATTTAAGGTCAACTTAAGTCACTAAAGGATATAATTGATAGATTAATTAATTTTCAAATCTAAAATTTTAATTAAGTTATCTAAAATCACATGCCTTTTGGAATTTAGCTTTTAACCTTTTCTCCCCCCATTTGCCTTGTACATCACGTGAACGTGAAGTTATTATTTATTTTTAATTAATAAATGTCTTGTTATTACAAATTAAAATATATATAATTTATTTTAATAAAAAAGCATATATTTAATTAAGACAAAAAAAGAAGGGAAAAAATGTCTTACACAGACTTAAGGGTTAATTGTTGGGCAGCCACCCACCCCTTTTGCTTCTTTGTGGAGAGACAACCGACAAATAGATACCAAATTAGAAACTACCGTACCATCTTTTATCAACTAAAAAACAACAATATTCCACAAAAATTTCAAACTTTTTCAGAATCCCAATTGAACTATAATACATTATTATAATATTAACCACTCTAAATTTTAGTTTGCACGTAATTTAGAACTTTGACTGAACACAGTTGTGTTTCATAAGTTTGAATATTATACTTTTATGTTTGAGAAAAAGATGACGATAGCGTTAACATTGCAGGAGTTGCCAATTCACCAACGGGGAGATGCAGTGAGCAGTTTGGTGTACGAAGCAAATGCCCGAGTGCGTGACCCGGTGTATGGGTGTGTTGGAGCAATATCGTCTCTACAGCATCAAATAGACGCCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTCAGGGTGCGTCAGACAGCATCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGGTCACCCTCATCGAGGCTCGTGGGCTCACACTCTAGGGCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATAGAGGACTCAATGTGGTGATATATCATACTATTATTATTTTCCTCGAATCCCATTTCCATGGCGATTTAGTTAGTTTTTCCTTTTTTTTTCTTTTCTTTTTCTACCCTGTTTTGTCAAATTGGCTTTCACCTGGTTGTTGGCCATTTGCTGTTACTTTCTTTCGTATATGCCGACCAGAGCATAGCTCCAGCAGTCAGGTAATGTTTCCTTTTGTCCAAGTTGGAAGATTGGATCATCTTCCTTAATTATAGTGTAATACTTTTAAGAAACTCGTATATAAGTATATATATCTAAACATATTATTGAGATATTATGTCGTCGTAATGAACATCTTTTCTATATTTAGTGTCATCTTCTTACTGTGTTGCTGATGAGTCCTATAGTATCATGTACAATTGATTGGTGTTGTAATACGTTG

mRNA sequence

GAGAAGTAGAGGGGGCACTCTCCAAATTGTGCTTCAACATATATTCCTATATTGTTTTCCTAGAGAATAAAGGAGGGGGGATACAAGAGGACGATGAAGACTGAAAATGGGAGGAAACAAGGGGGAGGAGCAGCCCCATGCGCAGCATGCAAGCTTCTTAGAAGAAGGTGCGGGGAAGAATGTGTATTTGCTCCATACTTTCCTGCTGACCAACCTCATAAGTTCGCCAACGTTCATAAGGTTTTCGGCGCTAGCAATGTTAACAAAATGCTTCAGGAGTTGCCAATTCACCAACGGGGAGATGCAGTGAGCAGTTTGGTGTACGAAGCAAATGCCCGAGTGCGTGACCCGGTGTATGGGTGTGTTGGAGCAATATCGTCTCTACAGCATCAAATAGACGCCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTCAGGGTGCGTCAGACAGCATCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGGTCACCCTCATCGAGGCTCGTGGGCTCACACTCTAGGGCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATAGAGGACTCAATGTGGTGATATATCATACTATTATTATTTTCCTCGAATCCCATTTCCATGGCGATTTAGTTAGTTTTTCCTTTTTTTTTCTTTTCTTTTTCTACCCTGTTTTGTCAAATTGGCTTTCACCTGGTTGTTGGCCATTTGCTGTTACTTTCTTTCGTATATGCCGACCAGAGCATAGCTCCAGCAGTCAGGTAATGTTTCCTTTTGTCCAAGTTGGAAGATTGGATCATCTTCCTTAATTATAGTGTAATACTTTTAAGAAACTCGTATATAAGTATATATATCTAAACATATTATTGAGATATTATGTCGTCGTAATGAACATCTTTTCTATATTTAGTGTCATCTTCTTACTGTGTTGCTGATGAGTCCTATAGTATCATGTACAATTGATTGGTGTTGTAATACGTTG

Coding sequence (CDS)

ATGAAGACTGAAAATGGGAGGAAACAAGGGGGAGGAGCAGCCCCATGCGCAGCATGCAAGCTTCTTAGAAGAAGGTGCGGGGAAGAATGTGTATTTGCTCCATACTTTCCTGCTGACCAACCTCATAAGTTCGCCAACGTTCATAAGGTTTTCGGCGCTAGCAATGTTAACAAAATGCTTCAGGAGTTGCCAATTCACCAACGGGGAGATGCAGTGAGCAGTTTGGTGTACGAAGCAAATGCCCGAGTGCGTGACCCGGTGTATGGGTGTGTTGGAGCAATATCGTCTCTACAGCATCAAATAGACGCCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTCAGGGTGCGTCAGACAGCATCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGGTCACCCTCATCGAGGCTCGTGGGCTCACACTCTAGGGCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATAGAGGACTCAATGTGGTGA

Protein sequence

MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW

Homology

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BLAST of Pay0011270 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.1e-64
Identity = 125/169 (73.96%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 4   ENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQEL 63
           E+ RKQ G A+PCAACKLLRRRC ++CVF+PYFPAD+P KFANVH+VFGASNVNKMLQEL
Sbjct: 3   ESSRKQ-GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQEL 62

Query: 64  PIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQT 123
           PIHQRGDAVSS+VYEANARVRDPVYGCVGAISSLQ QID LQ QLALAQAEVVHLRVRQ+
Sbjct: 63  PIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 122

Query: 124 ASFSNYGLSPTSPSNSGSPSSRLVG-SHSRAMF-EMDMVVDQAIEDSMW 171
            +F  +GL P SPS+SGSPSS+ V    ++ MF  MD+V + ++ +SMW
Sbjct: 123 TNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

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BLAST of Pay0011270 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 1.9e-44
Identity = 82/120 (68.33%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 10  GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRG 69
           G G++PCA+CKLLRRRC ++C+FAPYFP D PHKFA VHKVFGASNV+KMLQELP+HQR 
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  DAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQTASFSNY 129
           DAV+SLV+EANARVRDPVYGCVGAIS LQ+Q+  LQ QLA+AQAE++ ++++   +  ++
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

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BLAST of Pay0011270 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 78/117 (66.67%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 4   ENGRKQGGGAAPCAACKLLRRRC-GEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQE 63
           + G + G   +PCA CKLLRR+C  + CVFAPYFPA +P+KFA VHK+FGASNVNKMLQE
Sbjct: 3   QKGHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQE 62

Query: 64  LPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLR 120
           L  + R DAV S+VYEANAR++DPVYGCVG ISSL  Q++ LQTQLA AQAE++H+R
Sbjct: 63  LSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

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BLAST of Pay0011270 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 82/166 (49.40%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 15  PCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSS 74
           PCAACKLLRRRC +EC F+PYF   +PHKFA+VHKVFGASNV+KML E+P  QR DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 75  LVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVR------------Q 134
           LVYEAN R+RDPVYGC+GAIS+LQ Q+ ALQ +L   ++E++  + R            Q
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQ 164

Query: 135 TASFSNYG------LSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVD 163
            A F N G        P  P+    P++    S S  +F      D
Sbjct: 165 VAGFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRD 210

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BLAST of Pay0011270 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.9e-36
Identity = 76/128 (59.38%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 14  APCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVS 73
           +PCAACK LRR+C   C+FAPYFP ++PHKFANVHK+FGASNV K+L EL  HQR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 74  SLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSP 133
           SL YEA ARVRDPVYGCVGAIS LQ Q+  LQ +L  A A++ H           YGLS 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH-----------YGLST 126

Query: 134 TSPSNSGS 142
           ++    G+
Sbjct: 130 SAAGAPGN 126

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BLAST of Pay0011270 vs. ExPASy TrEMBL
Match: A0A1S3CAK2 (LOB domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498298 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60
           MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML
Sbjct: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 171
           RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW
Sbjct: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 170

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BLAST of Pay0011270 vs. ExPASy TrEMBL
Match: A0A0A0LYG0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G713680 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.9e-88
Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60
           MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML
Sbjct: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 171
           RQTASFSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDMVVDQA+E+SMW
Sbjct: 121 RQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRTMFEMDMVVDQAMEESMW 170

[Close]

BLAST of Pay0011270 vs. ExPASy TrEMBL
Match: A0A6J1KP63 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495252 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.8e-81
Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MKTENG-RKQ-GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENG RKQ GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLVGSH-SRAMFEMDMVVDQAIEDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRL+GS  SR MFEMDMVVDQA+ DS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Pay0011270 vs. ExPASy TrEMBL
Match: A0A6J1EHY2 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434249 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.8e-81
Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MKTENG-RKQ-GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENG RKQ GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLVGSH-SRAMFEMDMVVDQAIEDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRL+GS  SR MFEMDMVVDQA+ DS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Pay0011270 vs. ExPASy TrEMBL
Match: A0A061GE84 (LOB domain-containing protein 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029315 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.5e-71
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 4   ENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQEL 63
           E+GRKQ G A+PCAACKLLRRRC ++CVFAPYFPAD+P KFANVHKVFGASNVNKMLQEL
Sbjct: 3   ESGRKQ-GAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQEL 62

Query: 64  PIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQT 123
           P+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHLRVRQT
Sbjct: 63  PVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQT 122

Query: 124 ASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQA-IEDSMW 171
           ASFS++G  P SPSNSGSPSS+L+GS ++ MF++DMVVD A + +SMW
Sbjct: 123 ASFSHHGFGPASPSNSGSPSSKLMGSQAKPMFDVDMVVDHASLGESMW 169

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BLAST of Pay0011270 vs. NCBI nr
Match: XP_008459081.1 (PREDICTED: LOB domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 2.9e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60
           MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML
Sbjct: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 171
           RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW
Sbjct: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 170

[Close]

BLAST of Pay0011270 vs. NCBI nr
Match: XP_004145462.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN66910.1 hypothetical protein Csa_006984 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60
           MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML
Sbjct: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 171
           RQTASFSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDMVVDQA+E+SMW
Sbjct: 121 RQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRTMFEMDMVVDQAMEESMW 170

[Close]

BLAST of Pay0011270 vs. NCBI nr
Match: XP_038895183.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 327.0 bits (837), Expect = 9.5e-86
Identity = 163/170 (95.88%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60
           MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML
Sbjct: 1   MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QID LQTQLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDTLQTQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 171
           RQTASFSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDM VDQAI DSMW
Sbjct: 121 RQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMAVDQAIGDSMW 170

[Close]

BLAST of Pay0011270 vs. NCBI nr
Match: XP_022927419.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >XP_023000973.1 LOB domain-containing protein 4-like [Cucurbita maxima] >XP_023520045.1 LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo] >KAG7019437.1 LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MKTENG-RKQ-GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENG RKQ GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLVGSH-SRAMFEMDMVVDQAIEDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRL+GS  SR MFEMDMVVDQA+ DS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Pay0011270 vs. NCBI nr
Match: KAG6583812.1 (LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 160/173 (92.49%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MKTENG-RKQ-GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENG RKQ GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QID LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDNLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLVGSH-SRAMFEMDMVVDQAIEDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRL+GS  SR MFEMDMVVDQA+ DS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Pay0011270 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-65
Identity = 125/169 (73.96%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 4   ENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQEL 63
           E+ RKQ G A+PCAACKLLRRRC ++CVF+PYFPAD+P KFANVH+VFGASNVNKMLQEL
Sbjct: 3   ESSRKQ-GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQEL 62

Query: 64  PIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQT 123
           PIHQRGDAVSS+VYEANARVRDPVYGCVGAISSLQ QID LQ QLALAQAEVVHLRVRQ+
Sbjct: 63  PIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 122

Query: 124 ASFSNYGLSPTSPSNSGSPSSRLVG-SHSRAMF-EMDMVVDQAIEDSMW 171
            +F  +GL P SPS+SGSPSS+ V    ++ MF  MD+V + ++ +SMW
Sbjct: 123 TNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Pay0011270 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45
Identity = 82/120 (68.33%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 10  GGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRG 69
           G G++PCA+CKLLRRRC ++C+FAPYFP D PHKFA VHKVFGASNV+KMLQELP+HQR 
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  DAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQTASFSNY 129
           DAV+SLV+EANARVRDPVYGCVGAIS LQ+Q+  LQ QLA+AQAE++ ++++   +  ++
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Pay0011270 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 78/117 (66.67%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 4   ENGRKQGGGAAPCAACKLLRRRC-GEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQE 63
           + G + G   +PCA CKLLRR+C  + CVFAPYFPA +P+KFA VHK+FGASNVNKMLQE
Sbjct: 3   QKGHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQE 62

Query: 64  LPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLR 120
           L  + R DAV S+VYEANAR++DPVYGCVG ISSL  Q++ LQTQLA AQAE++H+R
Sbjct: 63  LSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of Pay0011270 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-37
Identity = 82/166 (49.40%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 15  PCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSS 74
           PCAACKLLRRRC +EC F+PYF   +PHKFA+VHKVFGASNV+KML E+P  QR DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 75  LVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVR------------Q 134
           LVYEAN R+RDPVYGC+GAIS+LQ Q+ ALQ +L   ++E++  + R            Q
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQ 164

Query: 135 TASFSNYG------LSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVD 163
            A F N G        P  P+    P++    S S  +F      D
Sbjct: 165 VAGFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRD 210

[Close]

BLAST of Pay0011270 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 76/128 (59.38%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 14  APCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVS 73
           +PCAACK LRR+C   C+FAPYFP ++PHKFANVHK+FGASNV K+L EL  HQR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 74  SLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSP 133
           SL YEA ARVRDPVYGCVGAIS LQ Q+  LQ +L  A A++ H           YGLS 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH-----------YGLST 126

Query: 134 TSPSNSGS 142
           ++    G+
Sbjct: 130 SAAGAPGN 126

The following BLAST results are available for this feature:

BLAST of Pay0011270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	2.1e-64	73.96	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	1.9e-44	68.33	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SA51	1.7e-40	66.67	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8L5T5	1.5e-36	49.40	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9FML4	1.9e-36	59.38	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Pay0011270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAK2	1.4e-90	100.00	LOB domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498298 PE=3 SV=...	[more]
A0A0A0LYG0	4.9e-88	97.06	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G713680 PE=3 SV...	[more]
A0A6J1KP63	5.8e-81	92.49	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495252...	[more]
A0A6J1EHY2	5.8e-81	92.49	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A061GE84	2.5e-71	82.14	LOB domain-containing protein 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_0293...	[more]

BLAST of Pay0011270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459081.1	2.9e-90	100.00	PREDICTED: LOB domain-containing protein 4 [Cucumis melo]	[more]
XP_004145462.1	1.0e-87	97.06	LOB domain-containing protein 4 [Cucumis sativus] >KGN66910.1 hypothetical prote...	[more]
XP_038895183.1	9.5e-86	95.88	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
XP_022927419.1	1.2e-80	92.49	LOB domain-containing protein 4-like [Cucurbita moschata] >XP_023000973.1 LOB do...	[more]
KAG6583812.1	2.7e-80	92.49	LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Pay0011270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	1.5e-65	73.96	LOB domain-containing protein 4	[more]
AT2G30130.1	1.3e-45	68.33	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G16530.1	1.2e-41	66.67	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G40470.1	1.0e-37	49.40	LOB domain-containing protein 15	[more]
AT5G63090.2	1.3e-37	59.38	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 5..156
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 5..156
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 2.6E-43 score: 146.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 26.454773

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011270.1	Pay0011270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010087	phloem or xylem histogenesis
molecular_function	GO:0000976	transcription cis-regulatory region binding