Pay0011159 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011159
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr08: 15114328 .. 15118048 (-)
RNA-Seq Expression	Pay0011159
Synteny	Pay0011159

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATATAACTCTGAAGAAGACTTATTGGTGGCCTGATATGAAGCGAGAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGGCAAAGGCCAGGAGGACTCCTTAATCCCCTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTATCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAACGTGGTTTATATCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAGTTATACATCGACAGGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTATGTTTTGGCCTAGTATGCAAAAAGCAATGGGAACAAAGTTGAAGTTCAGTACCGCATTCCATCCTCAGACAGATGGTCAGTCAGAAAGGACCATCCAGACCTTAGAAGACATGTTAAGAGCATGTGTCCTTCAGTTCAATGGAAATTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTAGCAGTCTAGTATCGGCATGGCACCATTTGAGGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACAAAGTGGGAGAACGAAAGCTAGTTGGTCCAGAGTTAGTACAAGTTACGTCAGACAATATTAAGTTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAAAAGAGCTATGCAGATAAGCGACGAAGAGATTTAGAGTTCCAGATTAGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAGGGCTGTTCTTCGTTTTGGGAGGAAAGGTAAGTTGAGTCCTAGATATATTGGTCCGTACCAGATAATAGAACAAGTTGGATCAGCAGCCTATAGACTTGAATTGCCAACGAAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATACTTCAGATACATCACATGTGTTGCAAGTACAACCAATTGAACTGAAAGAAGACTTGAGTTATAGAGAGGAAGCAGTTCAGATCCTCGACAGGAAGGAGCAAGTTTTGAGGAACAAAACGATCCGGCTCGTGAACGTTCTTTGGAGACATCATGGAATAGAGGAGGCAACCTGGGAGTCAGAAGATCAAATGAGGAGGAGTTACCCGACACTCTTCACCTAAGGACTTCTAAATTTCGAGGACGAAATTTCATAAGGGAGAGGTAAGTTGTAAACCCAAGATTTCCCTAGGATCATTTTCTCTTGTCATCATAGTTTGGATTACTAAGCTAAAAGGAGAAAAAAAAAGAGAGAAAAGAAAGGAAGTGGAATTGGACAGCAAGCCTACCACCGCAAGCCCATTTGTTTTTTCAGCCATATTTCATTTCTTTCCTCCATCATTTTCCATCCAAACTTTTAGAGCACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTAGTTTGAGGTTGAAGAAGATAGGAAAAAGTTCATGCAAAGCCAGCCATTGCAGAATCTGGGTGCAACTGTCAACCTCTGGTTTTTTTGTTCGGTTTGAGCTATCTAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAACGTTAGTTCATTTTCTAATAAATTTCATGAAGGAAGCTTGAGCTGAATAGTATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTGGAAGTGCACAAGTCGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATATCCTACAACTTTCATGAAGATTTTGTGAGCCAAAAATGACTTTAAGTGGGGTAATTGCAGGAGATAGATAAGGAATGGTAGAGAACTTCGAATTCTGTATTGTTTATGTTCGGGGCAATTCTGGACAAATTGGTTAAGAATCTCGTTTTCCTTTCTTCAGGTAAGTTGTAGAGTGTTAGAAAATGAAGAGTTTTATGTGTATTTCATTAATTTTGCTTAAGTTTTGAGGAAGTTATGGGTGTTGGAAGTTAGGATATCGAACCTGGAAAATCTTGAAATGTGGGTTGTAATGTGATTCTTAATCTAATTGTTTAGAAATTCATGAGCATGGAAGGACAAAAGCTATCTATGAATCTAATGCTCGGTTTTGGTTGTCGATAGGCCAAGAGGAAATAGGGGGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAATGACAAAACAATTTCTAAAATGTTATTAAACAATTATTCATAACTACATGTTTTACATGTTTTTCTATGAATGATACATGTTTTTGTAAACGGTTTCAAACATGAGTTTTAAGCTTAGATTTCCTAATGAGGGTTATATTCGAGCACGTGGCTAATGGCTTAATGAAAAGTAGTTGAAACGACATCTTTTAAAGTAAAGCATGTGTTAGCAAATATTGTATAATGATTTAAAGTTTTTCACGAGCAAACTGAATAAACTTGAGTTTTACAAAAGATAACGATAAACAGGCATGTTTAAATGTTTTCATGTGACTTCGCGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCTTGAGACTATATGGTACCGTGTGCACACAGGTTATATTTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACGAAGACGATGGGAGTGTTGGACGGGTCCCACTACATTGTTTGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACTACGTAAATCGGTCATGTTAGTTAAAACATTTGATGTACTTGTTATGCTTTGTTAGATTTTTTTTTTTTATGATGAACTTGGAAGATATTTTAGAAAACCTTATTTATTACACGTTTATGTTAAATGCTTTGTTTGAGCATATTTATATGTCTAAAGGTTTATCACATGTTCTGACGTCCGGATTTAGAGTTTTAAATTTAGTCACTCACTGGACCTCGTAGCTCATTCTTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTTTGCTGAAAGTTTCATATCAAACTCCAGTACGTGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGAAATGTTTTGTACGATTTCTATAATATCGTCTTAGAGGTCGTGGTCATAAAACTCTAGTTGTATAGGTTTTGGTCGTGATGTTTATATCAGGTTATTTTACAAACCAAGTGATGTAAAGGCTGCATCTTATGTATGTTAGGAAGGTTTTCCTGGTTTCCTCTGTGTGGTGTTCCATGTTGAATATTTTAAATCTAAGATTGGTATGTTTATCGGGCTTAACGTTCAGTAGGGTCAGCAGGGATCATTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCATATGGTCCAGGAGGGGGTGCGACACAATGAATGATGTAGACAAGGACCAATGGGTCAAAGCCATGGACCTTAAAATGGAGTCTATGTACTTCAATTCAGTGTGGTAACTTGTAGATTTACCTGAATGGGTAAAACCTATAAGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTAGCAAAATGGTATGCCCAAAGGGAAGGGGTTAA

mRNA sequence

ATGTATATAACTCTGAAGAAGACTTATTGGTGGCCTGATATGAAGCGAGAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGGCAAAGGCCAGGAGGACTCCTTAATCCCCTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTATCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAACGTGGTTTATATCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAGTTATACATCGACAGGATTGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACAAAGTGGGAGAACGAAAGCTAGTTGGTCCAGAGTTAGTACAAGTTACGTCAGACAATATTAAGTTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAAAAGAGCTATGCAGATAAGCGACGAAGAGATTTAGAGTTCCAGATTAGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAGGGCTGTTCTTCGTTTTGGGAGGAAAGATACATCACATGTGTTGCAAGTACAACCAATTGAACTGAAAGAAGACTTGAGTTATAGAGAGGAAGCAGTTCAGATCCTCGACAGGAAGGAGCAAAGCACAGGATTTTCGAGCAAACCAGGAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTGGAAGTGCACAAGTCGAATCAGAAGCTCTATTTGGTATGGGGTTAA

Coding sequence (CDS)

ATGTATATAACTCTGAAGAAGACTTATTGGTGGCCTGATATGAAGCGAGAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGGCAAAGGCCAGGAGGACTCCTTAATCCCCTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTATCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAACGTGGTTTATATCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAGTTATACATCGACAGGATTGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACAAAGTGGGAGAACGAAAGCTAGTTGGTCCAGAGTTAGTACAAGTTACGTCAGACAATATTAAGTTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAAAAGAGCTATGCAGATAAGCGACGAAGAGATTTAGAGTTCCAGATTAGAGAACAAGTTTTCTTAAAGTTATCTCCGTGGAGGGCTGTTCTTCGTTTTGGGAGGAAAGATACATCACATGTGTTGCAAGTACAACCAATTGAACTGAAAGAAGACTTGAGTTATAGAGAGGAAGCAGTTCAGATCCTCGACAGGAAGGAGCAAAGCACAGGATTTTCGAGCAAACCAGGAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTGGAAGTGCACAAGTCGAATCAGAAGCTCTATTTGGTATGGGGTTAA

Protein sequence

MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFLFGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIALYGRPCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIREQVFLKLSPWRAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSDALSILEVHKSNQKLYLVWG

Homology

[Close]

BLAST of Pay0011159 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 3    ITLKK---TYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDF 62
            +TL K    Y+WP ++  I +Y+  C+ CQ +K  R R  GLL PLP+ E +W  I MDF
Sbjct: 1117 VTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDF 1176

Query: 63   LFGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIALY 110
            + GLP TS   + I V+VDR +K   FI+ + T    QL  L    I  Y
Sbjct: 1177 VTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSY 1226

[Close]

BLAST of Pay0011159 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 3    ITLKK---TYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDF 62
            +TL K    Y+WP ++  I +Y+  C+ CQ +K  R R  GLL PLP+ E +W  I MDF
Sbjct: 1143 VTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDF 1202

Query: 63   LFGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIALY 110
            + GLP TS   + I V+VDR +K   FI+ + T    QL  L    I  Y
Sbjct: 1203 VTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSY 1252

[Close]

BLAST of Pay0011159 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-14
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7    KTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFLFGLPRT 66
            + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE + MDF+  LP +
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998

Query: 67   SRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDR-IALYGRP 113
            S GY+ ++V+VDR +K    +    + T +Q A+++  R IA +G P
Sbjct: 999  S-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0011159 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-14
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7    KTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFLFGLPRT 66
            + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE + MDF+  LP +
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998

Query: 67   SRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDR-IALYGRP 113
            S GY+ ++V+VDR +K    +    + T +Q A+++  R IA +G P
Sbjct: 999  S-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0011159 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-14
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7    KTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFLFGLPRT 66
            + + W  ++++I EYV  C  CQ  K    +P G L P+P  E  WE + MDF+  LP +
Sbjct: 939  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 998

Query: 67   SRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDR-IALYGRP 113
            S GY+ ++V+VDR +K    +    + T +Q A+++  R IA +G P
Sbjct: 999  S-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1044

[Close]

BLAST of Pay0011159 vs. ExPASy TrEMBL
Match: A0A1S3CAP1 (uncharacterized protein LOC103498328 OS=Cucumis melo OX=3656 GN=LOC103498328 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 221/253 (87.35%), Postives = 228/253 (90.12%), Query Frame = 0


Query: 1   MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
           MY TLKKTYWWP MKREIAEYVDRCLICQ VKPVRQR GGLLNPLP+PEWKWEHI +DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIALYGRPCRTPVCWN 120
           FGLP TSRGYDGIWVIVDRLTK   FI IKATSTLDQLAKLY+DRI       +  VCWN
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRIT-----TQDSVCWN 120

Query: 121 KVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIREQVFLKLSPW 180
           +VGERKLVGPEL+QVT DNIKLIRENLKIAQDRQKSYADKRRRDLEFQI EQVFLKLSPW
Sbjct: 121 EVGERKLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQVFLKLSPW 180

Query: 181 RAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSDALS 240
           R VLRFGRKD SHVLQVQP ELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFS+ALS
Sbjct: 181 RGVLRFGRKDPSHVLQVQPFELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSEALS 240

Query: 241 ILEVHKSNQKLYL 254
           ILEV KSNQKLYL
Sbjct: 241 ILEVQKSNQKLYL 248

[Close]

BLAST of Pay0011159 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.8e-97
Identity = 188/263 (71.48%), Postives = 197/263 (74.90%), Query Frame = 0


Query: 1    MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
            MY TLKKTYWWP MKR+IAEYVDRCLICQQVKP+RQRPGGLLN LPVPEWKW+HI MDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DRLTKT  FI IKA STLDQLAKLY+DRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIRE 180
              RTPVCWN+VGERKLV PELVQVTSDNIKLI+ENLKIAQDRQKSY DKRRRDLEFQI E
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGG 240
            QVFLKLS WR VLRF RK+                                   SSKPGG
Sbjct: 1363 QVFLKLSSWRGVLRFERKEHR--------------------------------ISSKPGG 1413

Query: 241  FLVFSDALSILEVHKSNQKLYLV 255
            F+VF D LSILEVHKSNQKLYLV
Sbjct: 1423 FMVFYDTLSILEVHKSNQKLYLV 1413

[Close]

BLAST of Pay0011159 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.8e-97
Identity = 188/263 (71.48%), Postives = 197/263 (74.90%), Query Frame = 0


Query: 1    MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
            MY TLKKTYWWP MKR+IAEYVDRCLICQQVKP+RQRPGGLLN LPVPEWKW+HI MDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DRLTKT  FI IKA STLDQLAKLY+DRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIRE 180
              RTPVCWN+VGERKLV PELVQVTSDNIKLI+ENLKIAQDRQKSY DKRRRDLEFQI E
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGG 240
            QVFLKLS WR VLRF RK+                                   SSKPGG
Sbjct: 1363 QVFLKLSSWRGVLRFERKEHR--------------------------------ISSKPGG 1413

Query: 241  FLVFSDALSILEVHKSNQKLYLV 255
            F+VF D LSILEVHKSNQKLYLV
Sbjct: 1423 FMVFYDTLSILEVHKSNQKLYLV 1413

[Close]

BLAST of Pay0011159 vs. ExPASy TrEMBL
Match: A0A5A7VI06 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00360 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.3e-96
Identity = 204/363 (56.20%), Postives = 208/363 (57.30%), Query Frame = 0


Query: 1   MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
           MY TLKKTYWWP MKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHI MDFL
Sbjct: 91  MYRTLKKTYWWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMDFL 150

Query: 61  FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRI-------------- 120
           FGLPRTSRG+DGIWVIVDRLTKT  FI IKATSTLDQL KLY+DRI              
Sbjct: 151 FGLPRTSRGFDGIWVIVDRLTKTAQFIPIKATSTLDQLVKLYVDRIVSQHGVLMSIVSDR 210

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 211 DPRFTSKFWPSVQKAMGTKLKFSTAFHPLTDGQSERTIQTLEDMLRACVLQFKGNWDTHL 270

Query: 181 ---------------------ALYGRPCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRE 222
                                ALYGRPCRTPVCWN+VGERKLVGPELVQVTSDNIKLI+E
Sbjct: 271 SLMEFAYNNNYQSSIDMTLFEALYGRPCRTPVCWNEVGERKLVGPELVQVTSDNIKLIKE 330

[Close]

BLAST of Pay0011159 vs. ExPASy TrEMBL
Match: A0A5A7TDR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00110 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.7e-95
Identity = 189/316 (59.81%), Postives = 205/316 (64.87%), Query Frame = 0


Query: 1    MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
            MY TLKKTYWW  MK+EIAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHI MDFL
Sbjct: 1604 MYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFL 1663

Query: 61   FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRI-------------- 120
            FGLPRTS G+DGIWVIVDRLTKTT FI IK TSTLDQLA+LY+D+I              
Sbjct: 1664 FGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDR 1723

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 1724 DPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL 1783

Query: 181  ---------------------ALYGRPCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRE 222
                                 ALYGRPCRTPVCWN+VGERKLVGPELVQ+T++NIKLIRE
Sbjct: 1784 PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRE 1843

[Close]

BLAST of Pay0011159 vs. NCBI nr
Match: XP_008459128.1 (PREDICTED: uncharacterized protein LOC103498328 [Cucumis melo])

HSP 1 Score: 442.2 bits (1136), Expect = 3.1e-120
Identity = 221/253 (87.35%), Postives = 228/253 (90.12%), Query Frame = 0


Query: 1   MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
           MY TLKKTYWWP MKREIAEYVDRCLICQ VKPVRQR GGLLNPLP+PEWKWEHI +DFL
Sbjct: 1   MYRTLKKTYWWPGMKREIAEYVDRCLICQLVKPVRQRLGGLLNPLPMPEWKWEHITIDFL 60

Query: 61  FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIALYGRPCRTPVCWN 120
           FGLP TSRGYDGIWVIVDRLTK   FI IKATSTLDQLAKLY+DRI       +  VCWN
Sbjct: 61  FGLPCTSRGYDGIWVIVDRLTKIARFIPIKATSTLDQLAKLYVDRIT-----TQDSVCWN 120

Query: 121 KVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIREQVFLKLSPW 180
           +VGERKLVGPEL+QVT DNIKLIRENLKIAQDRQKSYADKRRRDLEFQI EQVFLKLSPW
Sbjct: 121 EVGERKLVGPELLQVTLDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIGEQVFLKLSPW 180

Query: 181 RAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSDALS 240
           R VLRFGRKD SHVLQVQP ELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFS+ALS
Sbjct: 181 RGVLRFGRKDPSHVLQVQPFELKEDLSYREEAVQILDRKEQSTGFSSKPGGFLVFSEALS 240

Query: 241 ILEVHKSNQKLYL 254
           ILEV KSNQKLYL
Sbjct: 241 ILEVQKSNQKLYL 248

[Close]

BLAST of Pay0011159 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-96
Identity = 188/263 (71.48%), Postives = 197/263 (74.90%), Query Frame = 0


Query: 1    MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
            MY TLKKTYWWP MKR+IAEYVDRCLICQQVKP+RQRPGGLLN LPVPEWKW+HI MDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DRLTKT  FI IKA STLDQLAKLY+DRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIRE 180
              RTPVCWN+VGERKLV PELVQVTSDNIKLI+ENLKIAQDRQKSY DKRRRDLEFQI E
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGG 240
            QVFLKLS WR VLRF RK+                                   SSKPGG
Sbjct: 1363 QVFLKLSSWRGVLRFERKEHR--------------------------------ISSKPGG 1413

Query: 241  FLVFSDALSILEVHKSNQKLYLV 255
            F+VF D LSILEVHKSNQKLYLV
Sbjct: 1423 FMVFYDTLSILEVHKSNQKLYLV 1413

[Close]

BLAST of Pay0011159 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-96
Identity = 188/263 (71.48%), Postives = 197/263 (74.90%), Query Frame = 0


Query: 1    MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
            MY TLKKTYWWP MKR+IAEYVDRCLICQQVKP+RQRPGGLLN LPVPEWKW+HI MDFL
Sbjct: 1183 MYRTLKKTYWWPGMKRQIAEYVDRCLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFL 1242

Query: 61   FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRIA---------LYGR 120
            FGLPRTSRGYDGIWVI DRLTKT  FI IKA STLDQLAKLY+DRI          +  R
Sbjct: 1243 FGLPRTSRGYDGIWVIADRLTKTARFIPIKAMSTLDQLAKLYVDRIVSQHGVPVSIVSDR 1302

Query: 121  PCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRRRDLEFQIRE 180
              RTPVCWN+VGERKLV PELVQVTSDNIKLI+ENLKIAQDRQKSY DKRRRDLEFQI E
Sbjct: 1303 DPRTPVCWNEVGERKLVDPELVQVTSDNIKLIKENLKIAQDRQKSYVDKRRRDLEFQIGE 1362

Query: 181  QVFLKLSPWRAVLRFGRKDTSHVLQVQPIELKEDLSYREEAVQILDRKEQSTGFSSKPGG 240
            QVFLKLS WR VLRF RK+                                   SSKPGG
Sbjct: 1363 QVFLKLSSWRGVLRFERKEHR--------------------------------ISSKPGG 1413

Query: 241  FLVFSDALSILEVHKSNQKLYLV 255
            F+VF D LSILEVHKSNQKLYLV
Sbjct: 1423 FMVFYDTLSILEVHKSNQKLYLV 1413

[Close]

BLAST of Pay0011159 vs. NCBI nr
Match: KAA0067723.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 360.9 bits (925), Expect = 9.0e-96
Identity = 204/363 (56.20%), Postives = 208/363 (57.30%), Query Frame = 0


Query: 1   MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
           MY TLKKTYWWP MKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHI MDFL
Sbjct: 91  MYRTLKKTYWWPGMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMDFL 150

Query: 61  FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRI-------------- 120
           FGLPRTSRG+DGIWVIVDRLTKT  FI IKATSTLDQL KLY+DRI              
Sbjct: 151 FGLPRTSRGFDGIWVIVDRLTKTAQFIPIKATSTLDQLVKLYVDRIVSQHGVLMSIVSDR 210

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 211 DPRFTSKFWPSVQKAMGTKLKFSTAFHPLTDGQSERTIQTLEDMLRACVLQFKGNWDTHL 270

Query: 181 ---------------------ALYGRPCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRE 222
                                ALYGRPCRTPVCWN+VGERKLVGPELVQVTSDNIKLI+E
Sbjct: 271 SLMEFAYNNNYQSSIDMTLFEALYGRPCRTPVCWNEVGERKLVGPELVQVTSDNIKLIKE 330

[Close]

BLAST of Pay0011159 vs. NCBI nr
Match: KAA0041108.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 189/316 (59.81%), Postives = 205/316 (64.87%), Query Frame = 0


Query: 1    MYITLKKTYWWPDMKREIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHIIMDFL 60
            MY TLKKTYWW  MK+EIAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHI MDFL
Sbjct: 1604 MYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFL 1663

Query: 61   FGLPRTSRGYDGIWVIVDRLTKTTWFISIKATSTLDQLAKLYIDRI-------------- 120
            FGLPRTS G+DGIWVIVDRLTKTT FI IK TSTLDQLA+LY+D+I              
Sbjct: 1664 FGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDR 1723

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 1724 DPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHL 1783

Query: 181  ---------------------ALYGRPCRTPVCWNKVGERKLVGPELVQVTSDNIKLIRE 222
                                 ALYGRPCRTPVCWN+VGERKLVGPELVQ+T++NIKLIRE
Sbjct: 1784 PLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRE 1843

The following BLAST results are available for this feature:

BLAST of Pay0011159 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.3e-16	40.91	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.3e-16	40.91	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	5.2e-14	35.51	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	5.2e-14	35.51	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.2e-14	35.51	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0011159 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAP1	1.5e-120	87.35	uncharacterized protein LOC103498328 OS=Cucumis melo OX=3656 GN=LOC103498328 PE=...	[more]
A0A5A7TKT0	8.8e-97	71.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3D150	8.8e-97	71.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7VI06	4.3e-96	56.20	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35...	[more]
A0A5A7TDR2	1.7e-95	59.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold12...	[more]

BLAST of Pay0011159 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459128.1	3.1e-120	87.35	PREDICTED: uncharacterized protein LOC103498328 [Cucumis melo]	[more]
KAA0042035.1	1.8e-96	71.48	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK17971.1	1.8e-96	71.48	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0067723.1	9.0e-96	56.20	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0041108.1	3.4e-95	59.81	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Pay0011159 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 2..33 e-value: 8.4E-10 score: 38.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 42..142 e-value: 4.7E-9 score: 37.8
None	No IPR available	GENE3D	1.10.340.70		coord: 1..32 e-value: 1.7E-7 score: 33.3
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 2..106
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 43..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011159.1	Pay0011159.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity