Pay0011036 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011036
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RNA-binding protein 2
Location	chr03: 5731022 .. 5739741 (-)
RNA-Seq Expression	Pay0011036
Synteny	Pay0011036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACATCTACGGTGAGGACTCGCGTATTGGATCCTAATTACGTCTGTGGAGCTTTGCTTCGCTCTTCAGGTTCAGCTTCCAAACATTTTCTCGGAAAACAATAGATTCCTCTAAATTAATCGGCAGTTAGGGTTTTAGGAATCTCCAATTTGTGCGTTAAGGTCAATTCATTTGTCTCCGCTTTCCAAGATCCTGATTTCCCTCTGTTTTCTCAAGCACTAATTTTGGAAAATTGCAGCATATATGGCGGATGATTATTGGAATCGGCAGCAGCCTTTGCTTCCTTCGCCAGCCATGCTTAAACGACCTCGTACTGATTATGGTAGGCCCGTTTGTTTGTTACGTTTAATTTGTCGTCACTTGAAACCCCTTTTCTCAATTTTGTGTTTTTTTCTCGAATTCCGGTAATGATGTAAATGGGATTCTCAAGCTACTCTGTTATGAATTTTTTGATGGCTTAATTCCGAACAATATCCCGAAAAAGAAAATGCGGGAATTATTTTTTTTCCCCCTCCCTACTGGTTTTTGTTTGTTTATTTATTTAATTACTCGAAATAATCAGCGTCCAGAAAGTAATTGAATTCTGGTTTATTCTGATAAAGTTGTTGACAATTGTGAATGAAGAATGTACCTCGAAATCCGAATTATCTCGCCCCCAGCTTCTTGATGGGTGTTAATGTAGATCTTCGAAGTCTGTCTTTTACGGGGCATTAAAACAGTTTGATGGTCCAATGCACTTCATCTGATAGATGATACAAGGCAATTCTCCTTTTTATGGTTATAGTGGTGGATGCCTTTTTGTTATTTTGTTCTCCCATTTCTTTTTTGGTATCTGTGAGTGTCGTTAGCTTACGTGCACCTCAACTAGTCTCGTTGGACAACTCCTCTCTTTTAGTGTCAAGGAAATTTGTAGGATATTAAAATTCTAGATAGGTGGCTATTATGGATTGAACCCATGATCTCTTAACCCTTTATCAAGTTTGTGCCCCATATTTACTAATAGGCCAAATCCATGGTTGTTACAAAGGTGGACGTGCAAATCAAGTTTGTCAATAAGTAGTAGGAAGGGTCGCATTAAAACTTCTAATGTCTTCATGAATTGAAACTTGGTGATAATGCTCTTGTTTTCAACTATAGTCGGTTTTGAAATTTTACTTCATATTTTGAATCTTGTTGAAAATTCGTAGAGGATGATAATAAACTTTATTAACCCTTCATACAACATACAACTTTCACGACATCAAGGAAGAAACCATTACAATGAGTCTTAATCGTGCCAGAGGTAGCTTGTCTTTATCTGTATGGTATGCCATCTTGAGGAAACGTAAACTATTCAACGTTTTGGTCCTTAGTAGTGGAGAAAATTCATTCCACTCTGCTCAGTAAACAGAAGGTTGCTGTACCTCTATGTTGACAATCTGTCAAAGAGTCATTATTTGTGTGACTTCATATATTGTGAGAGAAGGCTTTCCAATTATATTTAAAATTTTGGAGGTGTTGAAGCGGTCAAGTGGAGAAAAAAAGAAGAAAAGAAACATTGATGCATCTTTTCTTCTTTTGTCCTTTTGCAGCTGCTTGTTAGGAAGATCTCTTTTCTGTTTTCTTTTTTTATTTTTTTATAAGAGACTAAGAGAGTATTTTCCTCTTTGAAAGCACCCAGAAAATCTTCTTGGACTCCATTCAATAAAAACAGGTCAGCTTAAACAGACACGAAGAATCGAAAGTCGAAATCAGCTGTAGAAAACAATGACGTTCTGAGTGAAAAAGGAAAAGGTTTTGAATCTGTACAAGCACAAGTAACGAAATTTAAGAACCTAGAGAACAAGAGGATGAAGACTCCACAGGAACGAATGGAAAATCTTGGTTTCCATGGATTCTGTCAGTTTAGAAACTTGAGTCTGCGGGAATGGATCCACCAGCATTCAAAATCAATTTTTCCAGTGCATATAGATAGCTGAGCTTCTCCTTCACACCATAGAATTCTTGCTCTACTTGTGCAGGCATCTTGAACACCAGTCAGGATTCTGTTGCTCGCAGGCACTCTGGAAGTCAATACAGGCATTTTTCACTCCAAGTGCCCCTTTGCTGGAACTGCTGCCCTTCAGCTGGTGTACATGATCATCAATCTTCTTGAAGTTCACAGGTGGCTGTGCTAGCGAATCTCAGTTTATTGAGAAGTTCCTCGGTATCTTCAAAGAAAAGAGTCACCACTTCAGAAATAAAAGATGGATGATTCTCATGTTGCAGCTGCAAATACTGACCATCCAGAGAACCCTCATGGATTAAGTCTTCTATATACTGAATCCACTGTCTTCGCATCAATCACACCTCCATTATTACGAGCTAGAAGAAGAAGGGTGTGATCCAGAAAAACTTGGGGTTGAAGTAGGGAGAATAGAGATTGTAGAAATGAAGTTTTGAAGGGAGGGATTTTAGTGAAGAATGGAGAAATATGAAGTGGGTTTTGTTTTGTATCAGCGAAAGTGGAAGAAGAAGCAGAGTTGAAAGCAGGTTTTAGAGAGAGTGGATTTGGATTGGATTGGATTTTGAGGATCTTTCTCTTCTTCTTACAAAGATAATCAAAGCCTCCCTTCACCTTTTGCTGCCTTGTCGTTTTTCCTTTTCTTTTCTAGGAAGGTCTCTTTAATGTTTTTAGTAGGCCGTAGCTTTGCTTACCAAAGTATCTGGGGCCTTGTATCAATTCTTTGGTAATGGTACACATTTTCAAGTGCTAGCCTAAATTCTTCAGTTATTTATTGCAACTGGTCTGCTTTTATGCTTCCTCCCAAGTAGTTTCTTATTGTGTTTAGTCATTGATTGTTCTTGTTATCTTTTGTTACTTTTTTTTTTCCTTTACTTCTTTGTTCTCTCCCTTGTGGAGTTTCCTATTCAGCATTAGTCTCTTTTCATTTCATTAGCAATTTTTTTCCTAATGTTAAAAAGAAAAAGTTCACCTTTCTCAATGGTCTTGCACTTTTGTTCATTGGAAAAATGTTCAGCAATCAATTATGCTAACGAAAGCATACTAGAGGAAAATGAGGGGTTGGAGGTTGGGGGAATAGTGTAATGCTATAAATGATAGAGGAGGTCTATCCAAATGCGGTGCCCATACTAGAATCTAAATTGAGGGTGGATACAAATGTAATAGAAACACTTTGGAGCTCGAGGAGATTATATGGATTTAAAAGTTGAGTATTGGAGTGTTTTTGAGGGGCAAATTGTTTTATAGTATGAAAGGAAGTAACAAAGAGTTGAGGAAGGAATGAAATGAAGTGGGGAAACTATTTGGCTGCTATGAGGGATAGTGGTTTCTTGGGAGAGACTTTAGTAGTGAGAATAGATGAATTTGGATAAGTTAGTCTTAGTTGATGAGATCACCATGATCAAAATGGAATAATGTGCCTGGTTGAGTTTTAGAGATATTCTTGTGCAGTCTCTAGTGGATTGGTTTTGTGTGTCTTAGGAGTGCTTGACAACCGTCACAAAGCCCCTTTAGCCAAATGGCTTTGACGTTTTTTCATTGAGCCCAATTCCCTATGGCATAGGATTATTGGAAGTAAACATGGTCCTCACCCTTTCGAGTGGCTTAATAAGGGGGTTAAAGGCACTTACTGTAATCTGTGGGAAGATGTCTAGAAAGAGCTCCCTGATCTTTTTTTGTGGGTTCGGTGTGCGGTGGGTCAGAAAAGAGATGTATTTCTGGGAAGACATTTGGGTGGGGAAAGACCACTTTGTGGATTATTCCTTAGTTTGTATCACTTGTCTTTTTTGAAAAATCATTTTGTGGCTGATTTTTTGGTTTGGAATGGGAACTCTTGTTCTTTCTCCTCTGGGTTCCGTTGTACTCCTCCTGATAGGGAAACATTGGATGTGGCAGTTTTGATTTCCCTTCTTGAGAGCCATTCTTTCTATAATGGGAGGAGAGATGTGAGGGTTTGGAGTTCTCCTTTGGAGGGATTCTTGTGTAAGTCTTTTTTTAGTGCCTAGTTAACCCTATCTCTGCGGGTGAATCGGTCTTTTCTTTGGTTTGGAGGATTAAGGTCCCTAGAAAAGTTTCTTCTTTTCTTGGCAGGCCGCGTCAATACGTTGGATAGGCTGTCCAGGATTTTGCCTTTGTTAGTTGGTCCTTTTTGTTGTATTTTTTGCTAGAAGGCGAAGGAAGACTTAGATCGCATTCTTTGGCATTGTGAGCTGGCGAGTCATGTTTGGGATGATTTTCTTTAGATTTTTGTCTTGTTGTATGCTTGTCATAGAGATGTTAGAGGGATGATCGAGGATTTCCTCCTCAATTCGCCTTGTGGGAAAAGAGGCCGGTTTCTTTGGTGTGCTTGTGTTCGTGCCATATTGTGGGATCTGTGGGATGAGAGGAATAGGAGGGTGTTTAGGGGAGGTGAAAGGGGGAGTGGGCAGATTTGGTTGGTTATTCAGTATCATGTTTCGCTTTGGGGTTCGATTTCGAAGAATTTTTGTAACTATCCTCTTGACATGATTTTATATACGTGAGCCCCCTTCCTATAGTGGCGGTATCTTGTTTTTTGTGGGCTTGTGTTTTGTGCTCCTGTTTATTCTTTCATTTTTTTTTTAGTGAAAGCTGTTTATTTCAATAAAAAAAAGTTCCATCCTATTGATGAAATATCTGTGTTTTATTAAAAGAAAGGGATGGTTAAAAAATTTCAAGAGTTGAAGACAATAAAGAAGGCTAGATCGAGTTTTTGATCACTTTTAAATGCATAGGGACTAGGGGAGCTTGATGGGACCATGCCCTTTTAGATGGGAGAACTCTTGGGTGAAATATCAAGAATTTTGGAGGAGATAGGGAGTTAACAACTACGTGGACATTTGGGAAAATGATATTAGTTGCTGCACACTTTGACAGGGATTATAAAGTGGGATTTGGATACATTTGAAACTCTTGGTAGCGGAGGGAGTTGAAAACCTAATCAGCAAAATAGATAAAAAAAAGGGAGAATGGGTGCTTGGAGTGGAGAGCTAGAGAGAAAAATCAATGCTATGGCAATTGCGTGGCATCATCCTCAATAGGGTTTTGCTTCGATTCAGAAATTTTAGTGGTTAAAATAAGATGATGTTAGACTTTTGATAACAGTAATGATGTTTGTTGCTTAAGATTTGTTTATTTATTTATTTATTTTTATTTATTATTTTTTATTTTGAAGTCCACTCGATTGTTATTACAAGAAGCTTTAGGTTCATATGCCGTGTATAATTAATATTTGCATATTATGATCCCCTACCTTAATGATGTTTAGATACTTCCATAAAGTTTCTTTTGGGCTTGATCCACATTTGCTAACATATTATTGGTGACAAACTGACATCTTACAATAATGTTGAAGTCTTTATGAAGAAGTATTCACTTAGTTTCATAAACTAGAAGATGAGTTTTTTTGGGTTTGGATGAAAAATTTCACTTGAGTTTACAAATGGCTCTGTTTAAGACTTTGATTTTCTATTTACTTTTGCTTTTACAGAGGCTTCCTGTCCATTGAACTTAAATTGAAAGTGATAAAACCAATGAAAACTCCAAATTACGTAGAAAGTGTATCGGGAGAAAAATCACGATATTTCTTTTCTTATTATTTTCGGATAATTACAAAAGGTACAATGGGGAATAAATAGAATAATACAGTGAGATATAAAAGGAAAGATATTTAGGGTAAATCTCCCTATGGGCCAAGCCCACTAACTCTAACACTTAAAAGTAGTGTTATATAGTATTTGGATTGTGAGGAAGAGATTAGATACATAAACAATTAATTTAGATAGTATCATTGTACGATTGGACTTTCTGTATTCATTGACTTGCTTTTCCCTTTTAAGATATCTTTTATTCCATTGCTGTTGGCACATCTGTCCTTCGATGTGTGGAATAAGCGCTCGTCCCCCCCCTCCCCCGTCTCTCTTTGATCTTCCCTTATTCTTCTTCTTTTGGTCTTCTTAGCTGTTTTCCTTTTTGTAAATTAGAAATGGAATTATGCCCTGCTTTCACTCTCTGCAGAACTTCCTGCCTCTGGATTGTCTACCGGCCATGATATGCACAATTATTTAGCAAGTGATGATCGTGGTGGTCCTCGGTCAGTAAAAGATACACAAACAATTGGTTCGGCATATGATCGTTATCTCCAGAGTGTGGTATGACTGAAATCTAGATTTCTTCTCTTTTCTTGCCTCGCAGTTTGAATGCTGAAAACTTTTTGTAATTGCTTCTGAAGCAACTTTCTTCTTTTACTTCCGGAGAAGTACCTACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCGAACAGAATGCCAGTTGGGAATAGAATGCCTGGGCCTTTATTACCTGATCCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCCAATGGTCGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTCCCTCTCCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCCGGCGGGAAGTAGCTCGTATCCTTTTTATAGGCGGTGATGCCACAAGCAAACTTATTTTGATATTTTTTTTCACCTTTCAATTATTTACAGAAAAAAGACAGAGAAAAAAAAAAAAAACTTTATTCCTTTATTCATATATATGTACACATAAAACTACATTCCTTCACTCGCATGTAGATATTTTCCGCCCCTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATGTAATAGTCCATTACTAGTTAATGTTTTGTTGTTTTTGAATTTTCTTTGTTAAGTTTCGAACTTGCACTAACCTTTACTTCTTTGTGTTAATTTTGTTTCAATTTATAGCGTGGTGGGGACCCCCTAATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCATTGCAAGGTGAATTATATTCACGGTTTTCCATATTGACCTTTGCAATTCCTATAGCAGCAATATTTTCCCCTTGTAGTAGCTACTTTTTTATTCTGGTAGAAAGGGTTGGAATTGAATTAATTTTAGAACATCGTTTCTTCAGAAAAATTCTTATCTTGTATTATTACTTAACTTGTGTGTACATGCATGTACATCATCTCTTTCTGGTTATTGGGTGGCTATGAGTATACTCTTATGTCGAGGAGTTCTGGTCTAGTTAGGAGCTTTGATTGGAGTTGGAAAATTTATTTGGTTTATGTCCAGTTTATAAATTCTAAGGGTGATTTTTGGATTTGAGTATTTTTCTCGTTTGTTTTCTTTTGGGGGTGGGGCCTATGTGGCTATACCTTCATCACTCGGCTAACTATTACTTTATCAAAGACGGCCTATAGAAAGGTTGTTCGTCCATTTTTGTTAAGATCTGTGCAGTGGAAGCTTTACTTTCAATGCTAGAGATTATTGAAGTTGTTTGATTTATCCTTATCTAGAGAAGATCTAAAGTTTGTCTGGACTCCTTTTGGGGAGGGTTTAATATTCTCAAGACAAGATTTAACCCTGCCAGTTGAGGAATCAAATGGATATTGGATCGTCTCTGTTTAGGGTTCCTTTTGCAATAGAGCCTTCATTCTTCTGGGCATTCCATCATGCAGAATGTACAAATGGAACCTGGGCGAGATTTTTTCTTTCCTTTTTTTCCCTTTCCTTTTCTTTTAGAAGATAAACTGATTTTTATTGCTGAAGCGAGATTTCTGCTTCACGCCTTCATCAATTTCTGCTTCACGCCTTCATCAATTTCTGCTTCACACTTTCATCAAACAGACTCTTGACTTTTCCTTGACAAACCAAAGATCCCCCTTTTCTTCTTTTCATGGCCATTGATTTCAAAGAGAGCTAAATGCTGTGGCTTAACGCAGTTAGAGCAGTGCTCGGAGATGTGTGGTTAAACTTTGATATGAATAGAAGGAATTTTCAAGATTACATGACATGCAGTTCTCTACGAAGTATAGTGGGTTTTAATGACTCCAGCTTTTGTGAGCTAGTCTTGTAATTTCATCTTATTAATAAAATTCTGTTTCCTATTAAAGAAAACATCTAGGTGCATGTTAATTAATTTTTCTTCTATAAATGGAAGTAGTTTCATTGTTCATGTGGCAACCTGTTGATGTTTAATTTTTGTTGAAAGAATACACGATAGATTTGCTAAAAATGTATCTGATTTGCACAGGTTATAAAATGGATGAACAAGATCCCGAATCTAATTATTTGCGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTTTGGATCTAGCGGCAAAAGGTGAATAAGCTATAGAGACAGGACGACCAATTTAAATGGAGACAGTGTTTTCTTCTAGTGCACATTTTACTAGCTGCTTATGCATCCATTATATGTTAGACATGCTGTTGTTAAGATAGCCAAATTGTAGCCGGCCCCATTGAATATTAAAGTTGCTTGTAAATTAAGGGGATTAGATTCAAAGTGTTTCAATAGTCATATGTGCAATTGAATTTTGATGTACAATTATGCCAGTGCTTCAGAATTCAAAGATATATGTGATCCAATTTTCATAAACTGTTGTTTCTTCCCTGCACAGTGAATCCATTCCCACACATATTTGGCATGGTGGATTAATATTTTGAACTCCAGTATTTATGACATATTAAAAGGCTAGTATTTGGTTTTGTAACGATGGTGGGAG

mRNA sequence

GTAACATCTACGGTGAGGACTCGCGTATTGGATCCTAATTACGTCTGTGGAGCTTTGCTTCGCTCTTCAGGTTCAGCTTCCAAACATTTTCTCGGAAAACAATAGATTCCTCTAAATTAATCGGCAGTTAGGGTTTTAGGAATCTCCAATTTGTGCGTTAAGGTCAATTCATTTGTCTCCGCTTTCCAAGATCCTGATTTCCCTCTGTTTTCTCAAGCACTAATTTTGGAAAATTGCAGCATATATGGCGGATGATTATTGGAATCGGCAGCAGCCTTTGCTTCCTTCGCCAGCCATGCTTAAACGACCTCGTACTGATTATGAACTTCCTGCCTCTGGATTGTCTACCGGCCATGATATGCACAATTATTTAGCAAGTGATGATCGTGGTGGTCCTCGGTCAGTAAAAGATACACAAACAATTGGTTCGGCATATGATCGTTATCTCCAGAGTGTGCAACTTTCTTCTTTTACTTCCGGAGAAGTACCTACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCGAACAGAATGCCAGTTGGGAATAGAATGCCTGGGCCTTTATTACCTGATCCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCCAATGGTCGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTCCCTCTCCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCCGGCGGGAAGTAGCTCGTATCCTTTTTATAGGCGGTGATGCCACAAGCAAACTTATTTTGATATTTTTTTTCACCTTTCAATTATTTACAGAAAAAAGACAGAGAAAAAAAAAAAAAACTTTATTCCTTTATTCATATATATGTACACATAAAACTACATTCCTTCACTCGCATGTAGATATTTTCCGCCCCTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCCCTAATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCATTGCAAGGTTATAAAATGGATGAACAAGATCCCGAATCTAATTATTTGCGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTTTGGATCTAGCGGCAAAAGGTGAATAAGCTATAGAGACAGGACGACCAATTTAAATGGAGACAGTGTTTTCTTCTAGTGCACATTTTACTAGCTGCTTATGCATCCATTATATGTTAGACATGCTGTTGTTAAGATAGCCAAATTGTAGCCGGCCCCATTGAATATTAAAGTTGCTTGTAAATTAAGGGGATTAGATTCAAAGTGTTTCAATAGTCATATGTGCAATTGAATTTTGATGTACAATTATGCCAGTGCTTCAGAATTCAAAGATATATGTGATCCAATTTTCATAAACTGTTGTTTCTTCCCTGCACAGTGAATCCATTCCCACACATATTTGGCATGGTGGATTAATATTTTGAACTCCAGTATTTATGACATATTAAAAGGCTAGTATTTGGTTTTGTAACGATGGTGGGAG

Coding sequence (CDS)

ATGGCGGATGATTATTGGAATCGGCAGCAGCCTTTGCTTCCTTCGCCAGCCATGCTTAAACGACCTCGTACTGATTATGAACTTCCTGCCTCTGGATTGTCTACCGGCCATGATATGCACAATTATTTAGCAAGTGATGATCGTGGTGGTCCTCGGTCAGTAAAAGATACACAAACAATTGGTTCGGCATATGATCGTTATCTCCAGAGTGTGCAACTTTCTTCTTTTACTTCCGGAGAAGTACCTACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCGAACAGAATGCCAGTTGGGAATAGAATGCCTGGGCCTTTATTACCTGATCCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCCAATGGTCGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTCCCTCTCCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCCGGCGGGAAGTAGCTCGTATCCTTTTTATAGGCGGTGATGCCACAAGCAAACTTATTTTGATATTTTTTTTCACCTTTCAATTATTTACAGAAAAAAGACAGAGAAAAAAAAAAAAAACTTTATTCCTTTATTCATATATATGTACACATAAAACTACATTCCTTCACTCGCATGTAGATATTTTCCGCCCCTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCCCTAATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCATTGCAAGGTTATAAAATGGATGAACAAGATCCCGAATCTAATTATTTGCGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTTTGGATCTAGCGGCAAAAGGTGA

Protein sequence

MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFIGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGFGSSGKR

Homology

[Close]

BLAST of Pay0011036 vs. ExPASy Swiss-Prot
Match: G7ID19 (RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.8e-75
Identity = 159/315 (50.48%), Postives = 197/315 (62.54%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSP-AMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQT 60
           MAD +WNRQQ  LP P  MLKRPRT+Y+   SG+++G+++HNY+A ++  G + + DT+ 
Sbjct: 1   MADGFWNRQQQHLPPPGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNN--GHQMLNDTKI 60

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPA 120
           +GSAYDR+LQS  L+SF SGE    G +G  R V         +PG  L DP  M     
Sbjct: 61  LGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-------GELPGHSLGDPSAMGHLSG 120

Query: 121 V--SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARI 180
           V   PDL+ NGR++ +G  LP+D++SRPG ET+PLP DAS+TLYVEGLP DS++REVA  
Sbjct: 121 VGGGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAH- 180

Query: 181 LFIGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVG 240
                                                                IFRPFVG
Sbjct: 181 -----------------------------------------------------IFRPFVG 240

Query: 241 YKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSR 300
           Y+E+RLV+KESKHRGGDPLILCFVDFANPACAATA+SALQGYK+DE +PES+YLRLQFSR
Sbjct: 241 YREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRLQFSR 252

Query: 301 HPGPRSGF-GSSGKR 312
            PG RSG  G  GKR
Sbjct: 301 SPGRRSGGPGPRGKR 252

[Close]

BLAST of Pay0011036 vs. ExPASy Swiss-Prot
Match: Q8H0P8 (RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.2e-74
Identity = 163/312 (52.24%), Postives = 190/312 (60.90%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MAD YWNRQQ LLP   + KRPR DYE+PASGL +G++MH     +DR G   VKD++TI
Sbjct: 1   MADGYWNRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEMHYLSREEDRSGHPMVKDSKTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVM-SRPPA 120
           GSAYDRYLQ  Q+ SFTSGE  T G +G+ R +         +P   L DP  M  R   
Sbjct: 61  GSAYDRYLQG-QVPSFTSGEASTVGALGLQRGIGG-------LPNHSLSDPSAMIGRHGG 120

Query: 121 VSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILF 180
             PDLAPNGR + YG   P+D +SR G E   LPPDAS TLY+EGLP D +RREVA    
Sbjct: 121 GGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAH--- 180

Query: 181 IGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYK 240
                                                              IFRPFVGY+
Sbjct: 181 ---------------------------------------------------IFRPFVGYR 240

Query: 241 ELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHP 300
           E+RLVSKE+KHR GDPLILCFVDFANPACAATA+SALQGYK+DE +PES++LRLQFSR+P
Sbjct: 241 EVRLVSKEAKHR-GDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQFSRYP 249

Query: 301 GPRSGFG--SSG 310
           GPRSG G  SSG
Sbjct: 301 GPRSGGGPRSSG 249

[Close]

BLAST of Pay0011036 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-53
Identity = 128/282 (45.39%), Postives = 160/282 (56.74%), Query Frame = 0


Query: 24  TDYELPASGLSTGHDMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFTSGEVP 83
           T Y +P+       DMH+YL+ D DRG P SVKDT++IGSAYDRYLQS+Q     S E  
Sbjct: 203 TPYLIPSG------DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAG 262

Query: 84  THGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSM 143
               +GM R   +     N MPGP + + ++     ++  D  PNGR++ +G    +DS+
Sbjct: 263 PFNGVGMVRQGGS-----NMMPGPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQ---LDSV 322

Query: 144 SRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFIGGDATSKLILIFFFTFQLFTEK 203
            RPGRE  PLPPD SNTLYVEGLP + SRREV                            
Sbjct: 323 GRPGREPHPLPPDVSNTLYVEGLPSNCSRREV---------------------------- 382

Query: 204 RQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKELRLVSKESKHRGGDPLILCFVD 263
                                   SH  IFRPFVGY+E+RLV+++SKHR GDP +LCFVD
Sbjct: 383 ------------------------SH--IFRPFVGYREVRLVTQDSKHRSGDPTVLCFVD 415

Query: 264 FANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG 305
           F N ACAATA+SALQ Y+MDE +P+S  LRLQF R+PGPR G
Sbjct: 443 FENSACAATALSALQDYRMDEDEPDSKILRLQFFRNPGPRPG 415

[Close]

BLAST of Pay0011036 vs. ExPASy Swiss-Prot
Match: A1A6K6 (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-50
Identity = 132/305 (43.28%), Postives = 159/305 (52.13%), Query Frame = 0


Query: 1   MADDYWNRQ-QPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQT 60
           MAD YWN+Q Q   P    +KRPR+D+E P+S ++ GH    Y   +D      V DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDED----LDVPDTRT 60

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPA 120
           IGSAYDRYLQSVQ     SGE    G + MGR        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNVQ---TIDDFMLRRGGV 120

Query: 121 VSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILF 180
           +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA    
Sbjct: 121 LPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNCSRREVAH--- 180

Query: 181 IGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYK 240
                                                              IFRPFVGY+
Sbjct: 181 ---------------------------------------------------IFRPFVGYR 228

Query: 241 ELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHP 300
           E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQGY+MDE + +S +LRLQFSR P
Sbjct: 241 EVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKP 228

Query: 301 GPRSG 305
           G R G
Sbjct: 301 GSRPG 228

[Close]

BLAST of Pay0011036 vs. ExPASy Swiss-Prot
Match: Q6JB11 (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.3e-19
Identity = 58/142 (40.85%), Postives = 71/142 (50.00%), Query Frame = 0


Query: 142 MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFIGGDATSKLILIFFFTFQLFTE 201
           M   GR   PLPPDAS+TLY+EGLP + +RREV                           
Sbjct: 22  MGYGGRPEPPLPPDASSTLYIEGLPANCTRREV--------------------------- 81

Query: 202 KRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKELRLVSKESKHRGGDPLILCFV 261
                                    SH  IFRPFVG++E+RLV+KES+H GGDP +LCFV
Sbjct: 82  -------------------------SH--IFRPFVGFREVRLVNKESRHPGGDPHVLCFV 109

Query: 262 DFANPACAATAMSALQGYKMDE 284
           DF NPA A  A+ ALQG+  D+
Sbjct: 142 DFDNPAQATIALEALQGHVTDD 109

[Close]

BLAST of Pay0011036 vs. ExPASy TrEMBL
Match: A0A1S3B4F0 (RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 3.0e-139
Identity = 256/311 (82.32%), Postives = 256/311 (82.32%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSGFGSSGKR
Sbjct: 301 PRSGFGSSGKR 257

[Close]

BLAST of Pay0011036 vs. ExPASy TrEMBL
Match: A0A6J1CKA2 (RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 9.5e-130
Identity = 237/311 (76.21%), Postives = 246/311 (79.10%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. ExPASy TrEMBL
Match: A0A6J1JXN9 (RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489771 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 7.1e-125
Identity = 231/311 (74.28%), Postives = 243/311 (78.14%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPRT+YE P+SGL   H+MHNY+A+DD GGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRTEYEPPSSGLPAVHEMHNYIANDDHGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRP+ANRMP+GNRMPGPLLPDP+VMSRP AV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPLANRMPIGNRMPGPLLPDPVVMSRPLAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLA NGRNIEYGNHLPVDS +RP RETVPLPPDA+NTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLALNGRNIEYGNHLPVDSTNRPIRETVPLPPDATNTLYVEGLPSDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLV+KESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVTKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. ExPASy TrEMBL
Match: A0A6J1FDW9 (RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444852 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.1e-122
Identity = 228/311 (73.31%), Postives = 240/311 (77.17%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPRT+YE P+SGL   H+MHNY+A+DD GGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRTEYEPPSSGLPAVHEMHNYIANDDHGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQ SSFTSGEVPTHGEMGMGRP+ANRMP+ NRMPGPLLPDP+VMSRP AV
Sbjct: 61  GSAYDRYLQSVQPSSFTSGEVPTHGEMGMGRPLANRMPIANRMPGPLLPDPVVMSRPLAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLA NGRNIEY NHLPVDS +RP RETVPLPPDA+NTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLALNGRNIEYSNHLPVDSTNRPIRETVPLPPDATNTLYVEGLPSDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLV+KESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVTKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. ExPASy TrEMBL
Match: A0A6J1E3U2 (RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.5e-122
Identity = 225/309 (72.82%), Postives = 237/309 (76.70%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR +YELP+SG   GHDMHN+LASDDR GP +VKDTQ I
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRAEYELPSSGFPPGHDMHNHLASDDRSGPPAVKDTQAI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSS  SGEVPT GEMGMGRP+ANR+PVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSAASGEVPTLGEMGMGRPIANRIPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDL PNGRNIEYGNHLPV+SM+RPGRETVPLPPDASNTLYVEGLP DSSRREVA     
Sbjct: 121 SPDLTPNGRNIEYGNHLPVESMNRPGRETVPLPPDASNTLYVEGLPSDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFAN ACAATAMSALQGYKMDEQDP+SNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANAACAATAMSALQGYKMDEQDPDSNYLRLQFSRHPG 255

Query: 301 PRSGFGSSG 310
           PRSG G SG
Sbjct: 301 PRSGTGGSG 255

[Close]

BLAST of Pay0011036 vs. NCBI nr
Match: XP_008441534.1 (PREDICTED: RNA-binding protein 2 [Cucumis melo] >XP_008441535.1 PREDICTED: RNA-binding protein 2 [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 6.1e-139
Identity = 256/311 (82.32%), Postives = 256/311 (82.32%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSGFGSSGKR
Sbjct: 301 PRSGFGSSGKR 257

[Close]

BLAST of Pay0011036 vs. NCBI nr
Match: XP_031743537.1 (RNA-binding protein 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 497.7 bits (1280), Expect = 7.5e-137
Identity = 252/311 (81.03%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYL SDDRGGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRN+EYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. NCBI nr
Match: KAE8647163.1 (hypothetical protein Csa_018814 [Cucumis sativus])

HSP 1 Score: 497.7 bits (1280), Expect = 7.5e-137
Identity = 252/311 (81.03%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYL SDDRGGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRN+EYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. NCBI nr
Match: XP_031743540.1 (RNA-binding protein 2 isoform X6 [Cucumis sativus])

HSP 1 Score: 497.7 bits (1280), Expect = 7.5e-137
Identity = 252/311 (81.03%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYL SDDRGGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRN+EYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. NCBI nr
Match: XP_031743542.1 (RNA-binding protein 2 isoform X8 [Cucumis sativus])

HSP 1 Score: 497.7 bits (1280), Expect = 7.5e-137
Identity = 252/311 (81.03%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60
           MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYL SDDRGGPRSVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120
           GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI 180
           SPDLAPNGRN+EYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA     
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH---- 180

Query: 181 GGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKE 240
                                                             IFRPFVGYKE
Sbjct: 181 --------------------------------------------------IFRPFVGYKE 240

Query: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 300
           LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG
Sbjct: 241 LRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPG 257

Query: 301 PRSGFGSSGKR 312
           PRSG GS GKR
Sbjct: 301 PRSGSGSGGKR 257

[Close]

BLAST of Pay0011036 vs. TAIR 10
Match: AT1G21320.2 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 231.5 bits (589), Expect = 9.3e-61
Identity = 141/311 (45.34%), Postives = 182/311 (58.52%), Query Frame = 0


Query: 1   MADDYWNRQQ----PLLPSPAML--KRPRTDYELPASGLSTGHDMHNYLASD-DRGGPRS 60
           MAD+YWN+Q+    P+  +P +L  KRPR+D++     + +G DMH+YL+ D DRG P S
Sbjct: 1   MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 60

Query: 61  VKDTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIV 120
           VKDT++IGSAYDRYLQS+Q     S E      +GM R   +     N MPGP + + ++
Sbjct: 61  VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGS-----NMMPGPSMGE-LM 120

Query: 121 MSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRRE 180
                ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRRE
Sbjct: 121 AGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRRE 180

Query: 181 VARILFIGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFR 240
           V                                                    SH  IFR
Sbjct: 181 V----------------------------------------------------SH--IFR 240

Query: 241 PFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRL 300
           PFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +P+S  LRL
Sbjct: 241 PFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILRL 247

Query: 301 QFSRHPGPRSG 305
           QF R+PGPR G
Sbjct: 301 QFFRNPGPRPG 247

[Close]

BLAST of Pay0011036 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-54
Identity = 128/282 (45.39%), Postives = 160/282 (56.74%), Query Frame = 0


Query: 24  TDYELPASGLSTGHDMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFTSGEVP 83
           T Y +P+       DMH+YL+ D DRG P SVKDT++IGSAYDRYLQS+Q     S E  
Sbjct: 203 TPYLIPSG------DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAG 262

Query: 84  THGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSM 143
               +GM R   +     N MPGP + + ++     ++  D  PNGR++ +G    +DS+
Sbjct: 263 PFNGVGMVRQGGS-----NMMPGPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQ---LDSV 322

Query: 144 SRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFIGGDATSKLILIFFFTFQLFTEK 203
            RPGRE  PLPPD SNTLYVEGLP + SRREV                            
Sbjct: 323 GRPGREPHPLPPDVSNTLYVEGLPSNCSRREV---------------------------- 382

Query: 204 RQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYKELRLVSKESKHRGGDPLILCFVD 263
                                   SH  IFRPFVGY+E+RLV+++SKHR GDP +LCFVD
Sbjct: 383 ------------------------SH--IFRPFVGYREVRLVTQDSKHRSGDPTVLCFVD 415

Query: 264 FANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG 305
           F N ACAATA+SALQ Y+MDE +P+S  LRLQF R+PGPR G
Sbjct: 443 FENSACAATALSALQDYRMDEDEPDSKILRLQFFRNPGPRPG 415

[Close]

BLAST of Pay0011036 vs. TAIR 10
Match: AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-51
Identity = 132/305 (43.28%), Postives = 159/305 (52.13%), Query Frame = 0


Query: 1   MADDYWNRQ-QPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQT 60
           MAD YWN+Q Q   P    +KRPR+D+E P+S ++ GH    Y   +D      V DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDED----LDVPDTRT 60

Query: 61  IGSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPA 120
           IGSAYDRYLQSVQ     SGE    G + MGR        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNVQ---TIDDFMLRRGGV 120

Query: 121 VSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILF 180
           +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA    
Sbjct: 121 LPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNCSRREVAH--- 180

Query: 181 IGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHVDIFRPFVGYK 240
                                                              IFRPFVGY+
Sbjct: 181 ---------------------------------------------------IFRPFVGYR 228

Query: 241 ELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHP 300
           E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQGY+MDE + +S +LRLQFSR P
Sbjct: 241 EVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKP 228

Query: 301 GPRSG 305
           G R G
Sbjct: 301 GSRPG 228

[Close]

BLAST of Pay0011036 vs. TAIR 10
Match: AT1G76940.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-34
Identity = 86/195 (44.10%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 110 DPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDS 169
           D  ++ R   +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + 
Sbjct: 42  DDFMLRRGGVLPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNC 101

Query: 170 SRREVARILFIGGDATSKLILIFFFTFQLFTEKRQRKKKKTLFLYSYICTHKTTFLHSHV 229
           SRREVA                                                      
Sbjct: 102 SRREVAH----------------------------------------------------- 161

Query: 230 DIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESN 289
            IFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQGY+MDE + +S 
Sbjct: 162 -IFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSK 174

Query: 290 YLRLQFSRHPGPRSG 305
           +LRLQFSR PG R G
Sbjct: 222 FLRLQFSRKPGSRPG 174

The following BLAST results are available for this feature:

BLAST of Pay0011036 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G7ID19	3.8e-75	50.48	RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1	[more]
Q8H0P8	3.2e-74	52.24	RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1	[more]
F4HWF9	2.4e-53	45.39	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]
A1A6K6	3.2e-50	43.28	Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE...	[more]
Q6JB11	2.3e-19	40.85	Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1	[more]

BLAST of Pay0011036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4F0	3.0e-139	82.32	RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1	[more]
A0A6J1CKA2	9.5e-130	76.21	RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 S...	[more]
A0A6J1JXN9	7.1e-125	74.28	RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148977...	[more]
A0A6J1FDW9	1.1e-122	73.31	RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444...	[more]
A0A6J1E3U2	9.5e-122	72.82	RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV...	[more]

BLAST of Pay0011036 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441534.1	6.1e-139	82.32	PREDICTED: RNA-binding protein 2 [Cucumis melo] >XP_008441535.1 PREDICTED: RNA-b...	[more]
XP_031743537.1	7.5e-137	81.03	RNA-binding protein 2 isoform X3 [Cucumis sativus]	[more]
KAE8647163.1	7.5e-137	81.03	hypothetical protein Csa_018814 [Cucumis sativus]	[more]
XP_031743540.1	7.5e-137	81.03	RNA-binding protein 2 isoform X6 [Cucumis sativus]	[more]
XP_031743542.1	7.5e-137	81.03	RNA-binding protein 2 isoform X8 [Cucumis sativus]	[more]

BLAST of Pay0011036 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21320.2	9.3e-61	45.34	nucleotide binding;nucleic acid binding	[more]
AT1G21320.1	1.7e-54	45.39	nucleotide binding;nucleic acid binding	[more]
AT1G76940.1	2.3e-51	43.28	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G76940.2	1.5e-34	44.10	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 154..299 e-value: 2.0E-12 score: 49.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 230..282 e-value: 1.4E-4 score: 21.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..159
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 230..311
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 8..178
None	No IPR available	PANTHER	PTHR10501:SF53	NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATED	coord: 8..178 coord: 230..311
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 230..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011036.4	Pay0011036.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding